| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126697610
Identifier: 126697610
GI number: 126697610
Start: 69040
End: 69513
Strand: Direct
Name: 126697610
Synonym: CD0044
Alternate gene names: NA
Gene position: 69040-69513 (Clockwise)
Preceding gene: 126697609
Following gene: 126697611
Centisome position: 1.61
GC content: 20.25
Gene sequence:
>474_bases ATGAAAAAATATAAATATGATTCTAAAAGATACTTACTCAATGTTACAATACCAGGATTTTTTATGATTTTAATATTGAT TTATGCACTGTTTAATAACTATACAAATTTTAATTTGAATATATATAGTTTGTTAATAATTGTCTGTACTTATGGTATAT TCAATACTTTTATATCATCAAGTAATCCTAAAAAAATTATTATTGATAGCAAATGTATACATTTTACCTCATTTATGACT ACACATAAGTATGAAATTAAAGATATAGAAAAGATAAGAATAAGAGAATTTTATAATAAAAAAATTTATCTAAAAATTAA TGATGGAAACCTTTTTAAAGGTAGGTATTGGATAAGAACAAATATGTTTAATAATAGTATAGCATTATATAGCTATTTCA TTGAGTTGGAAGAGTGCTTATATCCAGATTCACTAAAATTTAGAAATAAAAAATTTGAGAATAAGAACATATAA
Upstream 100 bases:
>100_bases GGAATGGCTATTTACAATAGGAATAGAATAATAAATGAAAATAAAAAGCTATCTATAGAAGAATAAGGTTAAAACAATTT TATTAAGGAGTGTATAGGTT
Downstream 100 bases:
>100_bases AAATAAAAAATTGAATTGAAGCCTAGCTTAATCTTTTTTGATAAGATATAAGTTTGAACTTTATACTAAATTTTTAGAAT TTTCAATCAAGACAATAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MKKYKYDSKRYLLNVTIPGFFMILILIYALFNNYTNFNLNIYSLLIIVCTYGIFNTFISSSNPKKIIIDSKCIHFTSFMT THKYEIKDIEKIRIREFYNKKIYLKINDGNLFKGRYWIRTNMFNNSIALYSYFIELEECLYPDSLKFRNKKFENKNI
Sequences:
>Translated_157_residues MKKYKYDSKRYLLNVTIPGFFMILILIYALFNNYTNFNLNIYSLLIIVCTYGIFNTFISSSNPKKIIIDSKCIHFTSFMT THKYEIKDIEKIRIREFYNKKIYLKINDGNLFKGRYWIRTNMFNNSIALYSYFIELEECLYPDSLKFRNKKFENKNI >Mature_157_residues MKKYKYDSKRYLLNVTIPGFFMILILIYALFNNYTNFNLNIYSLLIIVCTYGIFNTFISSSNPKKIIIDSKCIHFTSFMT THKYEIKDIEKIRIREFYNKKIYLKINDGNLFKGRYWIRTNMFNNSIALYSYFIELEECLYPDSLKFRNKKFENKNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19048; Mature: 19048
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYKYDSKRYLLNVTIPGFFMILILIYALFNNYTNFNLNIYSLLIIVCTYGIFNTFISS CCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC SNPKKIIIDSKCIHFTSFMTTHKYEIKDIEKIRIREFYNKKIYLKINDGNLFKGRYWIRT CCCCEEEEECCCEEHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEECCCCEEEEEEEEEE NMFNNSIALYSYFIELEECLYPDSLKFRNKKFENKNI CCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKYKYDSKRYLLNVTIPGFFMILILIYALFNNYTNFNLNIYSLLIIVCTYGIFNTFISS CCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC SNPKKIIIDSKCIHFTSFMTTHKYEIKDIEKIRIREFYNKKIYLKINDGNLFKGRYWIRT CCCCEEEEECCCEEHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEECCCCEEEEEEEEEE NMFNNSIALYSYFIELEECLYPDSLKFRNKKFENKNI CCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA