| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is acoA [H]
Identifier: 126697602
GI number: 126697602
Start: 58454
End: 59422
Strand: Direct
Name: acoA [H]
Synonym: CD0036
Alternate gene names: 126697602
Gene position: 58454-59422 (Clockwise)
Preceding gene: 126697601
Following gene: 126697603
Centisome position: 1.36
GC content: 32.71
Gene sequence:
>969_bases ATGTATATGTCAATATCAAAAGAAACATTGCTTGAAATGTATAAGAGAATGAATCAGGCTAGAAAATTTGAAGAGAAAGT TAGTTGGTTTTTTGCAAGAGGTATGGTTCATGGAACAACTCACTTATCTGTAGGTCAAGAAGCGTCAAGTGTGGCGGCTG TAATGGCTTTAGAAAAAGGAGATTTAGTATCATTAACTCATAGAGGACATAGTCAATTTATAGGAATGGGAATAGACCTA AATAAAATGATGGCTGAACTTATGGGTAAAGAAACTGGATTTTGTAAGGGAAAAGGAGGCTCAATGCATATAGCAGATAT TGAGTCAGGTAACTTAGGAGCAAATGGAGTTGTAGGTGGAGGTCTTACAATAGCTCCAGGAGCTGCACTTACACAACAGT ATAAAAAAACAGGCAAAATAGTTTTATGTAGTTTTGGTGATGGAGCATCAAATGAAGGTACTTTTCATGAAGGAATAAAT TTATCTTCAATATGGAAATTGCCAATAATATTTTACTGTGAGAATAATTTATACGGTATGTCAACAAGCATAAAACGTCA TATGAATATAGAAAGTATTGCCACTAGAGCAGCTTCTTATGGAATAGAAGGAATATCAATAGATGGATATAACCCAATAG AAGTATACGAAACAGTACAAAAAGCTGCTGAGAAGTGTAGAAGAGGAGAAGGACCTGTATTAATTGAAAGTAGAACTTAT AGATGGTTAGGTCATTCAAAATCAGATGCAAATGTATATAGAACAAAAGAAGAAATAGAATCATGGAAAGCAAAAGACCC TATTGAATTTTTAAAAAATTATCTTATAGAAAATAATCTATCTAATGAAGATGAATTAGATAAGATTCAAGAATTTGCAA AGCAATCAATAGAAGATGCAGTAGAGTTTGCTCAAAATAGCCCAAATCCAAAAATAGAGTCTTTATTAGAGGATGTATAT GCAGACTAA
Upstream 100 bases:
>100_bases GCGAAATTTATAAATAGTTTAGCAATTAATCACAGTTTAGCACTTAAATTATTAGAAGATTGTGACTAATAGAAAGATAG ATAAAAGTTAACAGGAGGGA
Downstream 100 bases:
>100_bases GAATGGTAAAGGAGGAAAATAAAAATGAGTACAAGGGAATTAACATATGCACAAGCAATAAAGGAAGCAATGTCAGAAGA AATGAGAAGAGATGAAAATG
Product: acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha
Products: [dihydrolipoyllysine-residue acetyltransferase] ; $S-acetyldihydrolipoyllysine; CO2
Alternate protein names: Acetoin:DCPIP oxidoreductase-alpha; Ao:DCPIP OR; TPP-dependent acetoin dehydrogenase E1 subunit alpha [H]
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MYMSISKETLLEMYKRMNQARKFEEKVSWFFARGMVHGTTHLSVGQEASSVAAVMALEKGDLVSLTHRGHSQFIGMGIDL NKMMAELMGKETGFCKGKGGSMHIADIESGNLGANGVVGGGLTIAPGAALTQQYKKTGKIVLCSFGDGASNEGTFHEGIN LSSIWKLPIIFYCENNLYGMSTSIKRHMNIESIATRAASYGIEGISIDGYNPIEVYETVQKAAEKCRRGEGPVLIESRTY RWLGHSKSDANVYRTKEEIESWKAKDPIEFLKNYLIENNLSNEDELDKIQEFAKQSIEDAVEFAQNSPNPKIESLLEDVY AD
Sequences:
>Translated_322_residues MYMSISKETLLEMYKRMNQARKFEEKVSWFFARGMVHGTTHLSVGQEASSVAAVMALEKGDLVSLTHRGHSQFIGMGIDL NKMMAELMGKETGFCKGKGGSMHIADIESGNLGANGVVGGGLTIAPGAALTQQYKKTGKIVLCSFGDGASNEGTFHEGIN LSSIWKLPIIFYCENNLYGMSTSIKRHMNIESIATRAASYGIEGISIDGYNPIEVYETVQKAAEKCRRGEGPVLIESRTY RWLGHSKSDANVYRTKEEIESWKAKDPIEFLKNYLIENNLSNEDELDKIQEFAKQSIEDAVEFAQNSPNPKIESLLEDVY AD >Mature_322_residues MYMSISKETLLEMYKRMNQARKFEEKVSWFFARGMVHGTTHLSVGQEASSVAAVMALEKGDLVSLTHRGHSQFIGMGIDL NKMMAELMGKETGFCKGKGGSMHIADIESGNLGANGVVGGGLTIAPGAALTQQYKKTGKIVLCSFGDGASNEGTFHEGIN LSSIWKLPIIFYCENNLYGMSTSIKRHMNIESIATRAASYGIEGISIDGYNPIEVYETVQKAAEKCRRGEGPVLIESRTY RWLGHSKSDANVYRTKEEIESWKAKDPIEFLKNYLIENNLSNEDELDKIQEFAKQSIEDAVEFAQNSPNPKIESLLEDVY AD
Specific function: Catalyzes the 2,6-dichlorophenolindophenol-dependent cleavage of acetoin into acetate and acetaldehyde. The alpha subunit is probably the catalytic subunit of the enzyme [H]
COG id: COG1071
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4885543, Length=313, Percent_Identity=37.6996805111821, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI4505685, Length=319, Percent_Identity=37.3040752351097, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI291084742, Length=319, Percent_Identity=37.3040752351097, Blast_Score=205, Evalue=4e-53, Organism=Homo sapiens, GI291084744, Length=326, Percent_Identity=36.5030674846626, Blast_Score=199, Evalue=4e-51, Organism=Homo sapiens, GI291084757, Length=319, Percent_Identity=34.1692789968652, Blast_Score=170, Evalue=1e-42, Organism=Homo sapiens, GI11386135, Length=320, Percent_Identity=28.75, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI258645172, Length=320, Percent_Identity=28.75, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI32564172, Length=320, Percent_Identity=34.0625, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17536047, Length=320, Percent_Identity=34.0625, Blast_Score=199, Evalue=1e-51, Organism=Caenorhabditis elegans, GI86563357, Length=320, Percent_Identity=30.3125, Blast_Score=143, Evalue=1e-34, Organism=Caenorhabditis elegans, GI86563355, Length=320, Percent_Identity=30.3125, Blast_Score=143, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6321026, Length=319, Percent_Identity=37.6175548589342, Blast_Score=216, Evalue=3e-57, Organism=Drosophila melanogaster, GI24639748, Length=323, Percent_Identity=34.0557275541796, Blast_Score=195, Evalue=3e-50, Organism=Drosophila melanogaster, GI24639744, Length=322, Percent_Identity=34.1614906832298, Blast_Score=188, Evalue=4e-48, Organism=Drosophila melanogaster, GI28571106, Length=322, Percent_Identity=34.1614906832298, Blast_Score=188, Evalue=4e-48, Organism=Drosophila melanogaster, GI24639740, Length=322, Percent_Identity=34.1614906832298, Blast_Score=188, Evalue=5e-48, Organism=Drosophila melanogaster, GI24639746, Length=308, Percent_Identity=34.7402597402597, Blast_Score=181, Evalue=7e-46, Organism=Drosophila melanogaster, GI21355903, Length=284, Percent_Identity=27.112676056338, Blast_Score=117, Evalue=9e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001017 [H]
Pfam domain/function: PF00676 E1_dh [H]
EC number: 1.2.4.1
Molecular weight: Translated: 35666; Mature: 35666
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYMSISKETLLEMYKRMNQARKFEEKVSWFFARGMVHGTTHLSVGQEASSVAAVMALEKG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCEEEECCCHHHHHHHHHEECCC DLVSLTHRGHSQFIGMGIDLNKMMAELMGKETGFCKGKGGSMHIADIESGNLGANGVVGG CEEEEEECCCCCEEECCCCHHHHHHHHHCCCCCCEECCCCCEEEEECCCCCCCCCCEECC GLTIAPGAALTQQYKKTGKIVLCSFGDGASNEGTFHEGINLSSIWKLPIIFYCENNLYGM CEEECCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHEECCCEEEEECCCCCCC STSIKRHMNIESIATRAASYGIEGISIDGYNPIEVYETVQKAAEKCRRGEGPVLIESRTY HHHHHHHCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCE RWLGHSKSDANVYRTKEEIESWKAKDPIEFLKNYLIENNLSNEDELDKIQEFAKQSIEDA EECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH VEFAQNSPNPKIESLLEDVYAD HHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure MYMSISKETLLEMYKRMNQARKFEEKVSWFFARGMVHGTTHLSVGQEASSVAAVMALEKG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCEEEECCCHHHHHHHHHEECCC DLVSLTHRGHSQFIGMGIDLNKMMAELMGKETGFCKGKGGSMHIADIESGNLGANGVVGG CEEEEEECCCCCEEECCCCHHHHHHHHHCCCCCCEECCCCCEEEEECCCCCCCCCCEECC GLTIAPGAALTQQYKKTGKIVLCSFGDGASNEGTFHEGINLSSIWKLPIIFYCENNLYGM CEEECCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHEECCCEEEEECCCCCCC STSIKRHMNIESIATRAASYGIEGISIDGYNPIEVYETVQKAAEKCRRGEGPVLIESRTY HHHHHHHCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCE RWLGHSKSDANVYRTKEEIESWKAKDPIEFLKNYLIENNLSNEDELDKIQEFAKQSIEDA EECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH VEFAQNSPNPKIESLLEDVYAD HHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: pyruvate; [dihydrolipoyllysine-residue acetyltransferase] lipoyllysine
Specific reaction: pyruvate + [dihydrolipoyllysine-residue acetyltransferase] lipoyllysine = [dihydrolipoyllysine-residue acetyltransferase] S- $acetyldihydrolipoyllysine + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969503; 10368162; 9384377 [H]