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The map label for this gene is xylP [H]

Identifier: 126697600

GI number: 126697600

Start: 55655

End: 57028

Strand: Direct

Name: xylP [H]

Synonym: CD0034

Alternate gene names: 126697600

Gene position: 55655-57028 (Clockwise)

Preceding gene: 126697599

Following gene: 126697601

Centisome position: 1.3

GC content: 29.04

Gene sequence:

>1374_bases
ATGAATACAGAAGTTAATGTTAAAGCAACTACGATTAGATATGAAAAGATTTCATTTTTTGAAAGAATTTCTTATGCTTG
TGGGGATTTGGGGTGCAATATCATATACTCAGCTATGTCAGCATTTTTGCTGTTTTATTATACTAATTATGCAGATGTTA
GTGCAGCAGCTGTAGGTAGTATTATGCTTGTATCTAGGATACTGGATGGGTTTAGTGACTTAACAATGGGAATTATAGTG
GATAGAACTAAATCCAAATACGGTAAGGCTAGGCCTTGGATTTTGAGAATGGCGATTCCTTTTGCTATAGCAGCAGTATT
ATTATTTTCTGTTCCATCAAATCTTGGTATCACTTCTAAATTAATTTATATTTTTATTACATATAACTTAGTTTCTACTG
TTATTTATACAGCAATCAATGTACCCTATGCAACTCTAAATTCACTTATAACTCAAAGCCAGTATGAAAGAGGAGTATTA
AGTATATTTAGAATGATATTAGCCACTTGTGGTACCTTACTAATAAATGGACTTACACTACCTCTAGTTGAATACTTTGG
AAATAATTTATCAGCATGGACTAAAACATTCTTTGTATTTGGAATAGCATCTATAATGGTATTTTTTATAACATTTACTG
GAACCAAGGAAAGAGTAAAAGCAGTTAAGCAAGATAGGAATGAAGTAATACCATTTAAAATAGGTATTAAATCTTTATTT
AGAAATAAGTACTGGATACAAATAACATTATGTTTAGTTTGTATATTTATTGTATTTGCGATAAATGGTGGTTCATCCGT
ATATTATGCAAAGTTTATTTTGGGAGATGAAAAATTATTTGGTCCTATAAATATGGTTTCAAATATATCCCAAATTATAG
CTATGTTTATGGTTGCTCCTTTTATAAAAAAATTTGGAAAAAGAAATGTATTAATAGTAGGTTCAATAATATTAATATCG
TCAAATGTTATGTTTATAATAGTTGGACAAAACTATATAGGAGTAATATCTGCAAGTGCTATAAAGGGAATAGGAAGTGC
TGGAATAGCATCAACAATGTTTGCTATTGTTTCAGATACTATTGAATATGGAGAATGGAAGACTGGATATAGAACTGAGG
GGCTTATAAATAGTGCATCTAGTTTTGGGTTTAAAGTGGGAAATGGATTAGGTTCAGCAATATTAGGTGCAGTATTATCA
ATTGGTGGTTATGTAGGAACATCAGCTACTCAAAGTGATTTAGCTATAGTATCAATAAAAGTATGTTTTATATACCTACC
TATATTTATAACAATATTACAAATTATCATAATGTCTTTTTATAAGCTTGATAAAGAATATAGTACTATACTTAATGAAT
TAAATACTAAATAA

Upstream 100 bases:

>100_bases
TTAATAAAATCATTACTAAAATTTTCAGAGCAAAGGTAAATCTTATGCTCTGAAATAAGAAACATTAGAAGGCAAATCTT
ACAAAAAGGAGTATGGTATT

Downstream 100 bases:

>100_bases
TGAAAAAGTTTCTTATAAAGTCTTAAGTTTAATTAAGGTCTATTGTAAATGTTCCTTATAAAAACTATTATATATTTATG
ATTATTGAAGAATTTTTAGA

Product: xylose transporter

Products: NA

Alternate protein names: Xylose transporter [H]

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MNTEVNVKATTIRYEKISFFERISYACGDLGCNIIYSAMSAFLLFYYTNYADVSAAAVGSIMLVSRILDGFSDLTMGIIV
DRTKSKYGKARPWILRMAIPFAIAAVLLFSVPSNLGITSKLIYIFITYNLVSTVIYTAINVPYATLNSLITQSQYERGVL
SIFRMILATCGTLLINGLTLPLVEYFGNNLSAWTKTFFVFGIASIMVFFITFTGTKERVKAVKQDRNEVIPFKIGIKSLF
RNKYWIQITLCLVCIFIVFAINGGSSVYYAKFILGDEKLFGPINMVSNISQIIAMFMVAPFIKKFGKRNVLIVGSIILIS
SNVMFIIVGQNYIGVISASAIKGIGSAGIASTMFAIVSDTIEYGEWKTGYRTEGLINSASSFGFKVGNGLGSAILGAVLS
IGGYVGTSATQSDLAIVSIKVCFIYLPIFITILQIIIMSFYKLDKEYSTILNELNTK

Sequences:

>Translated_457_residues
MNTEVNVKATTIRYEKISFFERISYACGDLGCNIIYSAMSAFLLFYYTNYADVSAAAVGSIMLVSRILDGFSDLTMGIIV
DRTKSKYGKARPWILRMAIPFAIAAVLLFSVPSNLGITSKLIYIFITYNLVSTVIYTAINVPYATLNSLITQSQYERGVL
SIFRMILATCGTLLINGLTLPLVEYFGNNLSAWTKTFFVFGIASIMVFFITFTGTKERVKAVKQDRNEVIPFKIGIKSLF
RNKYWIQITLCLVCIFIVFAINGGSSVYYAKFILGDEKLFGPINMVSNISQIIAMFMVAPFIKKFGKRNVLIVGSIILIS
SNVMFIIVGQNYIGVISASAIKGIGSAGIASTMFAIVSDTIEYGEWKTGYRTEGLINSASSFGFKVGNGLGSAILGAVLS
IGGYVGTSATQSDLAIVSIKVCFIYLPIFITILQIIIMSFYKLDKEYSTILNELNTK
>Mature_457_residues
MNTEVNVKATTIRYEKISFFERISYACGDLGCNIIYSAMSAFLLFYYTNYADVSAAAVGSIMLVSRILDGFSDLTMGIIV
DRTKSKYGKARPWILRMAIPFAIAAVLLFSVPSNLGITSKLIYIFITYNLVSTVIYTAINVPYATLNSLITQSQYERGVL
SIFRMILATCGTLLINGLTLPLVEYFGNNLSAWTKTFFVFGIASIMVFFITFTGTKERVKAVKQDRNEVIPFKIGIKSLF
RNKYWIQITLCLVCIFIVFAINGGSSVYYAKFILGDEKLFGPINMVSNISQIIAMFMVAPFIKKFGKRNVLIVGSIILIS
SNVMFIIVGQNYIGVISASAIKGIGSAGIASTMFAIVSDTIEYGEWKTGYRTEGLINSASSFGFKVGNGLGSAILGAVLS
IGGYVGTSATQSDLAIVSIKVCFIYLPIFITILQIIIMSFYKLDKEYSTILNELNTK

Specific function: Responsible for transport of xylose into the cell, with the concomitant uptake of protons (symport system) [H]

COG id: COG2211

COG function: function code G; Na+/melibiose symporter and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]

Homologues:

Organism=Escherichia coli, GI1786466, Length=452, Percent_Identity=28.0973451327434, Blast_Score=194, Evalue=1e-50,
Organism=Escherichia coli, GI87082306, Length=448, Percent_Identity=29.6875, Blast_Score=191, Evalue=9e-50,
Organism=Escherichia coli, GI1787902, Length=453, Percent_Identity=30.242825607064, Blast_Score=187, Evalue=2e-48,
Organism=Escherichia coli, GI48994989, Length=451, Percent_Identity=26.8292682926829, Blast_Score=166, Evalue=4e-42,
Organism=Escherichia coli, GI145693206, Length=452, Percent_Identity=28.5398230088496, Blast_Score=163, Evalue=2e-41,
Organism=Escherichia coli, GI1790561, Length=441, Percent_Identity=25.8503401360544, Blast_Score=137, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001927
- InterPro:   IPR018043 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 50280; Mature: 50280

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTEVNVKATTIRYEKISFFERISYACGDLGCNIIYSAMSAFLLFYYTNYADVSAAAVGS
CCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
IMLVSRILDGFSDLTMGIIVDRTKSKYGKARPWILRMAIPFAIAAVLLFSVPSNLGITSK
HHHHHHHHHCHHHHHHHHEEECCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
LIYIFITYNLVSTVIYTAINVPYATLNSLITQSQYERGVLSIFRMILATCGTLLINGLTL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
PLVEYFGNNLSAWTKTFFVFGIASIMVFFITFTGTKERVKAVKQDRNEVIPFKIGIKSLF
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEECHHHHH
RNKYWIQITLCLVCIFIVFAINGGSSVYYAKFILGDEKLFGPINMVSNISQIIAMFMVAP
CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHCCHHHHHHHHHHHHHHHHHHH
FIKKFGKRNVLIVGSIILISSNVMFIIVGQNYIGVISASAIKGIGSAGIASTMFAIVSDT
HHHHHCCCCEEEEEEEEEEECCEEEEEECCCCHHHEEHHHHHCCCCCHHHHHHHHHHHHH
IEYGEWKTGYRTEGLINSASSFGFKVGNGLGSAILGAVLSIGGYVGTSATQSDLAIVSIK
HHCCCCCCCCCCCCHHHCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
VCFIYLPIFITILQIIIMSFYKLDKEYSTILNELNTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNTEVNVKATTIRYEKISFFERISYACGDLGCNIIYSAMSAFLLFYYTNYADVSAAAVGS
CCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
IMLVSRILDGFSDLTMGIIVDRTKSKYGKARPWILRMAIPFAIAAVLLFSVPSNLGITSK
HHHHHHHHHCHHHHHHHHEEECCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
LIYIFITYNLVSTVIYTAINVPYATLNSLITQSQYERGVLSIFRMILATCGTLLINGLTL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
PLVEYFGNNLSAWTKTFFVFGIASIMVFFITFTGTKERVKAVKQDRNEVIPFKIGIKSLF
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEECHHHHH
RNKYWIQITLCLVCIFIVFAINGGSSVYYAKFILGDEKLFGPINMVSNISQIIAMFMVAP
CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHCCHHHHHHHHHHHHHHHHHHH
FIKKFGKRNVLIVGSIILISSNVMFIIVGQNYIGVISASAIKGIGSAGIASTMFAIVSDT
HHHHHCCCCEEEEEEEEEEECCEEEEEECCCCHHHEEHHHHHCCCCCHHHHHHHHHHHHH
IEYGEWKTGYRTEGLINSASSFGFKVGNGLGSAILGAVLSIGGYVGTSATQSDLAIVSIK
HHCCCCCCCCCCCCHHHCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
VCFIYLPIFITILQIIIMSFYKLDKEYSTILNELNTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9573180 [H]