Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

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The map label for this gene is 262192880

Identifier: 262192880

GI number: 262192880

Start: 1595391

End: 1596233

Strand: Direct

Name: 262192880

Synonym: BMA10247_A1656

Alternate gene names: NA

Gene position: 1595391-1596233 (Clockwise)

Preceding gene: 126447086

Following gene: 126445728

Centisome position: 67.81

GC content: 67.97

Gene sequence:

>843_bases
ATGAAGAGACTTTCACGCGTCGAGATCCTCGAAAAACTGCGCGCGACCATCGCGCGCGGCGAGCCGATCGTCGGCGGCGG
CGCGGGAACGGGCCTGTCCGCGAAATGCGAAGAGGCGGGCGGCATCGATCTCATCGTGATCTACAACTCGGGCCGCTACC
GGATGGCCGGGCGCGGCTCGCTCGCGGGGCTGCTCGCGTACGGCAACGCGAACGAGATCGTCGTCGACATGGCGCGCGAG
GTGCTGCCCGTCGTCAAATCGACGCCCGTGCTCGCCGGCGTGAACGGCACCGATCCGTTCTGCAATTTCGACGCGTTCCT
CGACGAGCTGACGCGGCTCGGGTTTTCCGGCGTGCAGAACTTCCCGACCGTCGGCCTCATCGACGGCAACTTCCGCGCGA
ACCTCGAGGAAACCGGGATGGGCTACGCGCTCGAAGTCGACATGATCCGGCTCGCGCACCGCAAGGGCCTGCTCACGACG
CCGTACGTGTTCAGCGAAGCCGACGCGATCGCGATGACCGAGGCGGGCGCGGACATCGTCGTCGCGCATCTGGGCCTCAC
CACGGGCGGCACGATCGGCGCGAACACCGCGCGCACGCTCGCCGATTGCGTGCCGCTCGTGCGCAGTTGGGCGGATGCGG
CAAAATCGGTGCGCGACGACGTGATCGTGCTCTGCCACGGCGGGCCGATCGCGTCGCCCGAGGACGCCGCGTACATCCTG
CGCGCGTGTCCGCAGTGCCACGGTTTCTACGGCGCGAGCTCGATGGAGCGGCTGCCGGCCGAAACCGCATTGACCGACAT
GACGCGCCGCTTCAAGGAGATCGACAGGCACGCCGCGTCATGA

Upstream 100 bases:

>100_bases
GCCGCCTCGTGCGCGTCCCCGCGCACATCAACGATGCGCGGTTCGCCGACGCCGCCGTAGAACACTTCCTATCGCTTCAC
GCAGCACACCGGAATTGAAG

Downstream 100 bases:

>100_bases
CGCCCGCGCGCGACGCGCGCGCTTCGCACGAGGAACCGAACGACGATGAACCACACCTCCTTCGCCAGCAGTGTCATCGA
CGCGCCGATCGAGCGCGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKRLSRVEILEKLRATIARGEPIVGGGAGTGLSAKCEEAGGIDLIVIYNSGRYRMAGRGSLAGLLAYGNANEIVVDMARE
VLPVVKSTPVLAGVNGTDPFCNFDAFLDELTRLGFSGVQNFPTVGLIDGNFRANLEETGMGYALEVDMIRLAHRKGLLTT
PYVFSEADAIAMTEAGADIVVAHLGLTTGGTIGANTARTLADCVPLVRSWADAAKSVRDDVIVLCHGGPIASPEDAAYIL
RACPQCHGFYGASSMERLPAETALTDMTRRFKEIDRHAAS

Sequences:

>Translated_280_residues
MKRLSRVEILEKLRATIARGEPIVGGGAGTGLSAKCEEAGGIDLIVIYNSGRYRMAGRGSLAGLLAYGNANEIVVDMARE
VLPVVKSTPVLAGVNGTDPFCNFDAFLDELTRLGFSGVQNFPTVGLIDGNFRANLEETGMGYALEVDMIRLAHRKGLLTT
PYVFSEADAIAMTEAGADIVVAHLGLTTGGTIGANTARTLADCVPLVRSWADAAKSVRDDVIVLCHGGPIASPEDAAYIL
RACPQCHGFYGASSMERLPAETALTDMTRRFKEIDRHAAS
>Mature_280_residues
MKRLSRVEILEKLRATIARGEPIVGGGAGTGLSAKCEEAGGIDLIVIYNSGRYRMAGRGSLAGLLAYGNANEIVVDMARE
VLPVVKSTPVLAGVNGTDPFCNFDAFLDELTRLGFSGVQNFPTVGLIDGNFRANLEETGMGYALEVDMIRLAHRKGLLTT
PYVFSEADAIAMTEAGADIVVAHLGLTTGGTIGANTARTLADCVPLVRSWADAAKSVRDDVIVLCHGGPIASPEDAAYIL
RACPQCHGFYGASSMERLPAETALTDMTRRFKEIDRHAAS

Specific function: Unknown

COG id: COG5564

COG function: function code R; Predicted TIM-barrel enzyme, possibly a dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR009215 [H]

Pfam domain/function: PF09370 TIM-br_sig_trns [H]

EC number: NA

Molecular weight: Translated: 29661; Mature: 29661

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLSRVEILEKLRATIARGEPIVGGGAGTGLSAKCEEAGGIDLIVIYNSGRYRMAGRGS
CCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHCCCCEEEEEEECCCEEEECCCCC
LAGLLAYGNANEIVVDMAREVLPVVKSTPVLAGVNGTDPFCNFDAFLDELTRLGFSGVQN
EEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCC
FPTVGLIDGNFRANLEETGMGYALEVDMIRLAHRKGLLTTPYVFSEADAIAMTEAGADIV
CCEEEEECCCCCCCHHHCCCCEEEEHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCEE
VAHLGLTTGGTIGANTARTLADCVPLVRSWADAAKSVRDDVIVLCHGGPIASPEDAAYIL
EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHH
RACPQCHGFYGASSMERLPAETALTDMTRRFKEIDRHAAS
HHCHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRLSRVEILEKLRATIARGEPIVGGGAGTGLSAKCEEAGGIDLIVIYNSGRYRMAGRGS
CCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHCCCCEEEEEEECCCEEEECCCCC
LAGLLAYGNANEIVVDMAREVLPVVKSTPVLAGVNGTDPFCNFDAFLDELTRLGFSGVQN
EEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCC
FPTVGLIDGNFRANLEETGMGYALEVDMIRLAHRKGLLTTPYVFSEADAIAMTEAGADIV
CCEEEEECCCCCCCHHHCCCCEEEEHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCEE
VAHLGLTTGGTIGANTARTLADCVPLVRSWADAAKSVRDDVIVLCHGGPIASPEDAAYIL
EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHH
RACPQCHGFYGASSMERLPAETALTDMTRRFKEIDRHAAS
HHCHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]