| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
Click here to switch to the map view.
The map label for this gene is 262192880
Identifier: 262192880
GI number: 262192880
Start: 1595391
End: 1596233
Strand: Direct
Name: 262192880
Synonym: BMA10247_A1656
Alternate gene names: NA
Gene position: 1595391-1596233 (Clockwise)
Preceding gene: 126447086
Following gene: 126445728
Centisome position: 67.81
GC content: 67.97
Gene sequence:
>843_bases ATGAAGAGACTTTCACGCGTCGAGATCCTCGAAAAACTGCGCGCGACCATCGCGCGCGGCGAGCCGATCGTCGGCGGCGG CGCGGGAACGGGCCTGTCCGCGAAATGCGAAGAGGCGGGCGGCATCGATCTCATCGTGATCTACAACTCGGGCCGCTACC GGATGGCCGGGCGCGGCTCGCTCGCGGGGCTGCTCGCGTACGGCAACGCGAACGAGATCGTCGTCGACATGGCGCGCGAG GTGCTGCCCGTCGTCAAATCGACGCCCGTGCTCGCCGGCGTGAACGGCACCGATCCGTTCTGCAATTTCGACGCGTTCCT CGACGAGCTGACGCGGCTCGGGTTTTCCGGCGTGCAGAACTTCCCGACCGTCGGCCTCATCGACGGCAACTTCCGCGCGA ACCTCGAGGAAACCGGGATGGGCTACGCGCTCGAAGTCGACATGATCCGGCTCGCGCACCGCAAGGGCCTGCTCACGACG CCGTACGTGTTCAGCGAAGCCGACGCGATCGCGATGACCGAGGCGGGCGCGGACATCGTCGTCGCGCATCTGGGCCTCAC CACGGGCGGCACGATCGGCGCGAACACCGCGCGCACGCTCGCCGATTGCGTGCCGCTCGTGCGCAGTTGGGCGGATGCGG CAAAATCGGTGCGCGACGACGTGATCGTGCTCTGCCACGGCGGGCCGATCGCGTCGCCCGAGGACGCCGCGTACATCCTG CGCGCGTGTCCGCAGTGCCACGGTTTCTACGGCGCGAGCTCGATGGAGCGGCTGCCGGCCGAAACCGCATTGACCGACAT GACGCGCCGCTTCAAGGAGATCGACAGGCACGCCGCGTCATGA
Upstream 100 bases:
>100_bases GCCGCCTCGTGCGCGTCCCCGCGCACATCAACGATGCGCGGTTCGCCGACGCCGCCGTAGAACACTTCCTATCGCTTCAC GCAGCACACCGGAATTGAAG
Downstream 100 bases:
>100_bases CGCCCGCGCGCGACGCGCGCGCTTCGCACGAGGAACCGAACGACGATGAACCACACCTCCTTCGCCAGCAGTGTCATCGA CGCGCCGATCGAGCGCGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MKRLSRVEILEKLRATIARGEPIVGGGAGTGLSAKCEEAGGIDLIVIYNSGRYRMAGRGSLAGLLAYGNANEIVVDMARE VLPVVKSTPVLAGVNGTDPFCNFDAFLDELTRLGFSGVQNFPTVGLIDGNFRANLEETGMGYALEVDMIRLAHRKGLLTT PYVFSEADAIAMTEAGADIVVAHLGLTTGGTIGANTARTLADCVPLVRSWADAAKSVRDDVIVLCHGGPIASPEDAAYIL RACPQCHGFYGASSMERLPAETALTDMTRRFKEIDRHAAS
Sequences:
>Translated_280_residues MKRLSRVEILEKLRATIARGEPIVGGGAGTGLSAKCEEAGGIDLIVIYNSGRYRMAGRGSLAGLLAYGNANEIVVDMARE VLPVVKSTPVLAGVNGTDPFCNFDAFLDELTRLGFSGVQNFPTVGLIDGNFRANLEETGMGYALEVDMIRLAHRKGLLTT PYVFSEADAIAMTEAGADIVVAHLGLTTGGTIGANTARTLADCVPLVRSWADAAKSVRDDVIVLCHGGPIASPEDAAYIL RACPQCHGFYGASSMERLPAETALTDMTRRFKEIDRHAAS >Mature_280_residues MKRLSRVEILEKLRATIARGEPIVGGGAGTGLSAKCEEAGGIDLIVIYNSGRYRMAGRGSLAGLLAYGNANEIVVDMARE VLPVVKSTPVLAGVNGTDPFCNFDAFLDELTRLGFSGVQNFPTVGLIDGNFRANLEETGMGYALEVDMIRLAHRKGLLTT PYVFSEADAIAMTEAGADIVVAHLGLTTGGTIGANTARTLADCVPLVRSWADAAKSVRDDVIVLCHGGPIASPEDAAYIL RACPQCHGFYGASSMERLPAETALTDMTRRFKEIDRHAAS
Specific function: Unknown
COG id: COG5564
COG function: function code R; Predicted TIM-barrel enzyme, possibly a dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR009215 [H]
Pfam domain/function: PF09370 TIM-br_sig_trns [H]
EC number: NA
Molecular weight: Translated: 29661; Mature: 29661
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLSRVEILEKLRATIARGEPIVGGGAGTGLSAKCEEAGGIDLIVIYNSGRYRMAGRGS CCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHCCCCEEEEEEECCCEEEECCCCC LAGLLAYGNANEIVVDMAREVLPVVKSTPVLAGVNGTDPFCNFDAFLDELTRLGFSGVQN EEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCC FPTVGLIDGNFRANLEETGMGYALEVDMIRLAHRKGLLTTPYVFSEADAIAMTEAGADIV CCEEEEECCCCCCCHHHCCCCEEEEHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCEE VAHLGLTTGGTIGANTARTLADCVPLVRSWADAAKSVRDDVIVLCHGGPIASPEDAAYIL EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHH RACPQCHGFYGASSMERLPAETALTDMTRRFKEIDRHAAS HHCHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKRLSRVEILEKLRATIARGEPIVGGGAGTGLSAKCEEAGGIDLIVIYNSGRYRMAGRGS CCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHCCCCEEEEEEECCCEEEECCCCC LAGLLAYGNANEIVVDMAREVLPVVKSTPVLAGVNGTDPFCNFDAFLDELTRLGFSGVQN EEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCC FPTVGLIDGNFRANLEETGMGYALEVDMIRLAHRKGLLTTPYVFSEADAIAMTEAGADIV CCEEEEECCCCCCCHHHCCCCEEEEHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCEE VAHLGLTTGGTIGANTARTLADCVPLVRSWADAAKSVRDDVIVLCHGGPIASPEDAAYIL EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHH RACPQCHGFYGASSMERLPAETALTDMTRRFKEIDRHAAS HHCHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]