Click here to switch to the map view.

The map label for this gene is 126447086

Identifier: 126447086

GI number: 126447086

Start: 1594171

End: 1595388

Strand: Direct

Name: 126447086

Synonym: BMA10247_A1655

Alternate gene names: NA

Gene position: 1594171-1595388 (Clockwise)

Preceding gene: 126446643

Following gene: 262192880

Centisome position: 67.76

GC content: 69.95

Gene sequence:

>1218_bases
ATGGTACCCCACCGTACACGGATCTACGTTGCGGCAACCGTTGATACAAAGGGCGCGGAAGCGCATTTCGTCAAGGACCG
GATCGCCGACGCGGGGCTTGCGGCGGTCGTGGTCGACCTGTCGACCCGCGTGCCGGGGCGCGCGGCGGACATCGGCGCCG
ACGCCGTCGCCGCGCACAACCCCGACGGCGCGGCCGCCGTGTTCTGCGGCGACCGCGGCCGCGCGATCGCCGCGATGGCG
GTTGCGTTCGAACACTACATCAAAAGCCGCGACGACGTCGCCGCGCTGATCGGCATCGGCGGCTCCGGCGGCACGGCGCT
CGTCACGCCGGCGATGCAGGCGCTGCCGATCGGCATGCCGAAGCTGATGATCTCGACGATGGCCTCGGGCGACGTGTCCG
CGTACATCGGCTCGTCGGACATCGCGATGCTCTATTCGGTGGCGGACATCGCCGGCCTGAACCGGATCTCGCGCCAGGTG
CTCGCGAACGGCGCGCACATGATCGCCGGCGCGGTGCGCGACATGCAGCCGCCGCACGCCGATCTGAAGCCCGCGCTCGG
CCTCACGATGTTCGGCGTGACGACGCCGTGCATCCAGGCGGTCACCTCGCGGCTCGACGCGCGCTTCGACTGCATCGTGT
TCCACGCGACGGGCAAAGGCGGCCCCGCGATGGAAAAGCTCGCCGACAGCGGCCTGCTCGACGGCGTGCTCGATCTCACC
ACCACCGAAGTCTGCGATCTGCTGATGGGCGGCGTGCTCGCGTGCGGCGCGGACCGGTTCGACCTGATCGCGCGCAGCCG
GGTGCCGTACGTCGGCTCGTGCGGCGCGCTCGACATGGTGAACTTCGGCCACATCGACACGGTGCCGCCCCGCTACGCGC
AGCGGCTGCTGTACAAGCACAACCCGCAGGTCACGCTGATGCGCACGACGCCCGACGAGAACCGCCGGATCGGCGAATGG
ATCGGCGCGAAGCTGAACGCATGCGACGGCCCGGTGCGCTTCCTGATTCCCGAAGGCGGGGTCTCCGCGCTCGACGCGCC
GGGCCAGGCGTTCTGGAACCCGCAAGCCGACGAGGCGCTGTTCGACGCGCTCGAGGCCACCGTCGTGCAGACCGAGCGCC
GCCGCCTCGTGCGCGTCCCCGCGCACATCAACGATGCGCGGTTCGCCGACGCCGCCGTAGAACACTTCCTATCGCTTCAC
GCAGCACACCGGAATTGA

Upstream 100 bases:

>100_bases
GGACGACCGCTGAGACGGCCGTCTCATCTGTGTTAAAGTTACCGTGGAATCGAATCGCGGTACATCGTGCGACAAACGAA
CGATTGGCGAAGGAGACCAA

Downstream 100 bases:

>100_bases
AGATGAAGAGACTTTCACGCGTCGAGATCCTCGAAAAACTGCGCGCGACCATCGCGCGCGGCGAGCCGATCGTCGGCGGC
GGCGCGGGAACGGGCCTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MVPHRTRIYVAATVDTKGAEAHFVKDRIADAGLAAVVVDLSTRVPGRAADIGADAVAAHNPDGAAAVFCGDRGRAIAAMA
VAFEHYIKSRDDVAALIGIGGSGGTALVTPAMQALPIGMPKLMISTMASGDVSAYIGSSDIAMLYSVADIAGLNRISRQV
LANGAHMIAGAVRDMQPPHADLKPALGLTMFGVTTPCIQAVTSRLDARFDCIVFHATGKGGPAMEKLADSGLLDGVLDLT
TTEVCDLLMGGVLACGADRFDLIARSRVPYVGSCGALDMVNFGHIDTVPPRYAQRLLYKHNPQVTLMRTTPDENRRIGEW
IGAKLNACDGPVRFLIPEGGVSALDAPGQAFWNPQADEALFDALEATVVQTERRRLVRVPAHINDARFADAAVEHFLSLH
AAHRN

Sequences:

>Translated_405_residues
MVPHRTRIYVAATVDTKGAEAHFVKDRIADAGLAAVVVDLSTRVPGRAADIGADAVAAHNPDGAAAVFCGDRGRAIAAMA
VAFEHYIKSRDDVAALIGIGGSGGTALVTPAMQALPIGMPKLMISTMASGDVSAYIGSSDIAMLYSVADIAGLNRISRQV
LANGAHMIAGAVRDMQPPHADLKPALGLTMFGVTTPCIQAVTSRLDARFDCIVFHATGKGGPAMEKLADSGLLDGVLDLT
TTEVCDLLMGGVLACGADRFDLIARSRVPYVGSCGALDMVNFGHIDTVPPRYAQRLLYKHNPQVTLMRTTPDENRRIGEW
IGAKLNACDGPVRFLIPEGGVSALDAPGQAFWNPQADEALFDALEATVVQTERRRLVRVPAHINDARFADAAVEHFLSLH
AAHRN
>Mature_405_residues
MVPHRTRIYVAATVDTKGAEAHFVKDRIADAGLAAVVVDLSTRVPGRAADIGADAVAAHNPDGAAAVFCGDRGRAIAAMA
VAFEHYIKSRDDVAALIGIGGSGGTALVTPAMQALPIGMPKLMISTMASGDVSAYIGSSDIAMLYSVADIAGLNRISRQV
LANGAHMIAGAVRDMQPPHADLKPALGLTMFGVTTPCIQAVTSRLDARFDCIVFHATGKGGPAMEKLADSGLLDGVLDLT
TTEVCDLLMGGVLACGADRFDLIARSRVPYVGSCGALDMVNFGHIDTVPPRYAQRLLYKHNPQVTLMRTTPDENRRIGEW
IGAKLNACDGPVRFLIPEGGVSALDAPGQAFWNPQADEALFDALEATVVQTERRRLVRVPAHINDARFADAAVEHFLSLH
AAHRN

Specific function: Unknown

COG id: COG5441

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0261 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008322 [H]

Pfam domain/function: PF06792 UPF0261 [H]

EC number: NA

Molecular weight: Translated: 42735; Mature: 42735

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPHRTRIYVAATVDTKGAEAHFVKDRIADAGLAAVVVDLSTRVPGRAADIGADAVAAHN
CCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEHHCCCCCCCCCCCCCHHCCCC
PDGAAAVFCGDRGRAIAAMAVAFEHYIKSRDDVAALIGIGGSGGTALVTPAMQALPIGMP
CCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEECCHHHHHCCCCH
KLMISTMASGDVSAYIGSSDIAMLYSVADIAGLNRISRQVLANGAHMIAGAVRDMQPPHA
HHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
DLKPALGLTMFGVTTPCIQAVTSRLDARFDCIVFHATGKGGPAMEKLADSGLLDGVLDLT
CCCHHHCEEEHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHCCHHHHHHHHH
TTEVCDLLMGGVLACGADRFDLIARSRVPYVGSCGALDMVNFGHIDTVPPRYAQRLLYKH
HHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
NPQVTLMRTTPDENRRIGEWIGAKLNACDGPVRFLIPEGGVSALDAPGQAFWNPQADEAL
CCCEEEEECCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHH
FDALEATVVQTERRRLVRVPAHINDARFADAAVEHFLSLHAAHRN
HHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVPHRTRIYVAATVDTKGAEAHFVKDRIADAGLAAVVVDLSTRVPGRAADIGADAVAAHN
CCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEHHCCCCCCCCCCCCCHHCCCC
PDGAAAVFCGDRGRAIAAMAVAFEHYIKSRDDVAALIGIGGSGGTALVTPAMQALPIGMP
CCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEECCHHHHHCCCCH
KLMISTMASGDVSAYIGSSDIAMLYSVADIAGLNRISRQVLANGAHMIAGAVRDMQPPHA
HHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
DLKPALGLTMFGVTTPCIQAVTSRLDARFDCIVFHATGKGGPAMEKLADSGLLDGVLDLT
CCCHHHCEEEHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHCCHHHHHHHHH
TTEVCDLLMGGVLACGADRFDLIARSRVPYVGSCGALDMVNFGHIDTVPPRYAQRLLYKH
HHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
NPQVTLMRTTPDENRRIGEWIGAKLNACDGPVRFLIPEGGVSALDAPGQAFWNPQADEAL
CCCEEEEECCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHH
FDALEATVVQTERRRLVRVPAHINDARFADAAVEHFLSLHAAHRN
HHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]