| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126447952
Identifier: 126447952
GI number: 126447952
Start: 1523293
End: 1523883
Strand: Reverse
Name: 126447952
Synonym: BMA10247_A1584
Alternate gene names: NA
Gene position: 1523883-1523293 (Counterclockwise)
Preceding gene: 126445938
Following gene: 126445891
Centisome position: 64.77
GC content: 68.36
Gene sequence:
>591_bases ATGGACATTCAAAAGATCGAAGCGAGGCTTGAGTTCCTGCGCGAAGCGGAGCGCCTGAAGAGCGTGCTGAGGAGCGCGCA CACGTCGACGGGCCGCGCCGAGAGCACGGCCGAGCACAGCTGGCGGCTGTGCCTGATGGCGATCACGCTCGCCGACGAAC TGCCGGGGCTCGACATGCTCAAGGTGCTGAAGATGTGCGTGATTCACGATCTCGGCGAGGCGCTGCGCGGCGACGTGCCG GCGATCCGCGCCGACGCGCATCCCGACAAGAGCGCGCACGAGCGCGCCGATCTGCTGACGCTCACGCGCATGCTCGATGC GCCGCTGCGCGACGAAATCCTGTCGCTGTGGGACGAATACGAGCGCGCGGCGTCGCAGGAGGCGCAGGCGGTGAAGGCGC TCGACAAGCTGGAAACGATCCTGCAGCACGCCCAGGGAGAGAACCCGCCCGATTTCGACTACGCGTTCAACCTCACGTAC GGCAGCCGCTACACGAGCGCGGCGCCGCTGTTTCGCGCAGTGCGCGAGATCGTCGACGCGCAGACCCGAAGCCGGATCGA CGCGCGGGGCGAGCCGCCCCCGGCGCGCTAG
Upstream 100 bases:
>100_bases GCGCGGCTCGCGGCGAGACGCGCGCCCGGCGTGCGAGCCGGGCGCGCAACCACGTCCGCCGCGCCCCGATCGTCCGCCAT CCCGATGCCGTCATATCGAC
Downstream 100 bases:
>100_bases CCGGCCGGCGCGCACGCGGCTGCGCGCGGCGCGCATTCTGTCCTATCCTGTGCGGAAAACGCGGCGCACCCGGCGCGTCG CGCCCAGCCCAGGAGTTCCG
Product: HD domain-containing protein
Products: NA
Alternate protein names: Metal-Dependent Phosphohydrolase; HD Domain Protein; HD Domain-Containing Protein; Metal-Dependent Phosphohydrolase HD Subdomain; HD Superfamily Hydrolase; Xin-Antitoxin System Toxin Component PIN Family; Hydrolase; HAD Superfamily Hydrolase; Hydrolases Of HD Superfamily; Metal-Dependent Phosphohydrolase HD Region; HD Superfamily Metal-Dependent Phosphohydrolase; HD Domain-Containing; HDDC2 Protein
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MDIQKIEARLEFLREAERLKSVLRSAHTSTGRAESTAEHSWRLCLMAITLADELPGLDMLKVLKMCVIHDLGEALRGDVP AIRADAHPDKSAHERADLLTLTRMLDAPLRDEILSLWDEYERAASQEAQAVKALDKLETILQHAQGENPPDFDYAFNLTY GSRYTSAAPLFRAVREIVDAQTRSRIDARGEPPPAR
Sequences:
>Translated_196_residues MDIQKIEARLEFLREAERLKSVLRSAHTSTGRAESTAEHSWRLCLMAITLADELPGLDMLKVLKMCVIHDLGEALRGDVP AIRADAHPDKSAHERADLLTLTRMLDAPLRDEILSLWDEYERAASQEAQAVKALDKLETILQHAQGENPPDFDYAFNLTY GSRYTSAAPLFRAVREIVDAQTRSRIDARGEPPPAR >Mature_196_residues MDIQKIEARLEFLREAERLKSVLRSAHTSTGRAESTAEHSWRLCLMAITLADELPGLDMLKVLKMCVIHDLGEALRGDVP AIRADAHPDKSAHERADLLTLTRMLDAPLRDEILSLWDEYERAASQEAQAVKALDKLETILQHAQGENPPDFDYAFNLTY GSRYTSAAPLFRAVREIVDAQTRSRIDARGEPPPAR
Specific function: Unknown
COG id: COG1896
COG function: function code R; Predicted hydrolases of HD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22015; Mature: 22015
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIQKIEARLEFLREAERLKSVLRSAHTSTGRAESTAEHSWRLCLMAITLADELPGLDML CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH KVLKMCVIHDLGEALRGDVPAIRADAHPDKSAHERADLLTLTRMLDAPLRDEILSLWDEY HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH ERAASQEAQAVKALDKLETILQHAQGENPPDFDYAFNLTYGSRYTSAAPLFRAVREIVDA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHH QTRSRIDARGEPPPAR HHHHHCCCCCCCCCCC >Mature Secondary Structure MDIQKIEARLEFLREAERLKSVLRSAHTSTGRAESTAEHSWRLCLMAITLADELPGLDML CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH KVLKMCVIHDLGEALRGDVPAIRADAHPDKSAHERADLLTLTRMLDAPLRDEILSLWDEY HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH ERAASQEAQAVKALDKLETILQHAQGENPPDFDYAFNLTYGSRYTSAAPLFRAVREIVDA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHH QTRSRIDARGEPPPAR HHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA