Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

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The map label for this gene is 126445891

Identifier: 126445891

GI number: 126445891

Start: 1520862

End: 1523192

Strand: Reverse

Name: 126445891

Synonym: BMA10247_A1583

Alternate gene names: NA

Gene position: 1523192-1520862 (Counterclockwise)

Preceding gene: 126447952

Following gene: 126446820

Centisome position: 64.74

GC content: 73.14

Gene sequence:

>2331_bases
ATGCCGAGGCAAGCCGACCCCGCTTCCCCGCGCGCGCCGCAAGCCGCCGCGTCCGCTTCTTCATCCGCGCGTTGCGCCGC
GCCCGGCGCGGCGCCGCCGCAATCGGCACAACCGCCGCAATCGCCGCAATCGCCGCAATCGCCGCAACCGGCCCCGCCCA
CGCCCGCGTTCATCGCGCCCGAGCCCGATGCGCAGAAGGCCGTGCGCGGCAGCCAGTTCGTGCTGAAGGCGGGCGACGCG
TTCGTCGTGAGCGACGCGCTCGGCGACATCGCCGGGCGCGACGACGGCCTCTTCGTCGACGACATGCGCGTGCTGTCGCA
ATGGCGGCTCACGTTCGGCGGCCGCGCGCCGTCGCTGCTGTCGGGGGCGACGAGCGCGGACAACGCGTCGTTCACCGCGC
ACCTGACGAACCGTCCGCTGCCGCCGCTCGGCGGCCGCGAGACGCCCGAGGGCGTGATCCACATCGAGCGGATGCGCGTG
CTTGCCGACAATGTGCTTCACGAGGCGCTCACGCTGACGAACTACGGCACGTGCGACGCCGAGGTGCCGCTGTCGGTGTC
GTTCGGCGCGGACTTCAAGGACATGTTCGAAGTGCGCGGCTCGCGGCGCGAGCGGCGTGGCGCGGTCGCGCCGCCGTGCG
TCGAGGCGGGCGCGGTCAGGCTGCGCTACGACGGGCTCGACGCGGTCGAGCGCAGCGTGCGGATCGGCTTCGAGCCGAAG
CCCGACACGCTCGCCGTCGATCGCGCCGACTACACGCTGACGATCGCCGCGCAGGCGTGCGTGTCGCTGTATCTGACGGT
CGAGGCGCGCGTGGGCGCCGCGCACGCGGGCGGCGACGCGTTCGCGCGGCGGCCGTGCGTCGCGACCGGGCGCGGCGCGC
TGCGCAAGGCGCTGGCCGACGTGCACCGCGCGATGCGCGAGCGGCGCCGCACGATCGCGCGCGTGCACACGAGCAATCCG
CTTTTCAACGCGTGGCTCGACCGCTCGCTCGCGGACCTGGGCCTGCTCACGACGTCGCTCGAAACCGGCCCGTACCCGTA
CGCGGGCATTCCGTGGTTCTCGACGCCGTTCGGCCGCGACGCGGTGATCACGTCGCTGCAGATGTTGTGGCTGCAGCCGT
CGCTCGCGCGCGGCGTGCTGCGCTTTCTCGCCGAGCATCAGGCGCGCGAGACATCGGCGTTTCGCGACGCGGAGCCGGGC
AAGATCATGCACGAATTCCGCAAGAGCGAGATGGCGGCCACGGGCGAAGTGCCGTTCGCGCTGTACTACGGCGGCGTCGA
TACCACGCCGTTGTTCGTCGTGCTCGCGGGCGCGTATCTCGAGTACACCGGCGACGAATCGCTGATCGACGAGCTGTGGC
CCGCGCTCGAGCGCGCCGCGCAGTGGGTGAGCACCGTGTGCGAGCGCAACCCGCGCGGGCTGCTCGACTATCAGCGCACC
TCCGCGCGCGGGCTCGCCAACCAGGGCTGGAAGGACAGCCAGGATTCGGTGTTCCATGCGGACGGCCGCTTCCCGAGCGG
GCCGATCGCGCTCGTCGAAGTGCAGGCCTACGCGTGCGCGGCGTTCGACGCAATGGCGACGTTCTCGCGCCGGCGCGGCC
ACGCGGCCGACACCGTGCGCTACGCGCAGCGCGCGAAGCGGCTGCGCGAGCAGGTCGAGGCGTTGTTCTGGATGCCCGAG
GCGGGCTTCTACGGCATCGCGGTGGACGGCCACGGCGAGCTGTGCCGCGTGCTCGCGTCGAACGCCGCGCACCTGCTCGC
GTTCGGCCTGCCCGAGCAGAGCCGCGGCGAATCGGTCGCGCGCGTGCTCGGCTCGACGCTGTTTCGCACCGGCTGGGGCG
TGCGCACGCTCGCGGCCGGCCAGCCGCGCTTCAATCCGATGGCGTATCACAACGGCTCGATCTGGCCGCACGACAACGCG
CTCGCCGCGCGCGGCCTCGCGCGCTACGGCGACAAGCGCGCGGTGCTCGATCTGTTGCGCGCGCTGTTCGAGGCGGCCGT
GAGCTTCGACATGCGGCTGCCCGAGCTCTTCTGCGGCTTCCCGCGCCGGCGCGGCGAGCCGCCAACGGCGTATCCGGTCG
CGTGCCTGCCGCAGGCGTGGGCGGCGGGCGCGCCGTTCATGATGCTGCAGGCTTGCCTCGGCATCTCGGTCGACGCGGCG
CGCGGCGAGGTGCGCGTCGAGCGGCCCGAGCTGCCGGAAGGCGTCGATTGGCTGCGCGTCGACGATCTGCGCGTCGGCGG
CGACAGCGTGTCGCTCACGTTCCGGCGCGTCGAGGGGCAGGTGGTCGCGGCGGCCGAGCCGGGCGGCGCGCGCGTCGTCG
CGGTGCTGTAA

Upstream 100 bases:

>100_bases
CCGGCCGGCGCGCACGCGGCTGCGCGCGGCGCGCATTCTGTCCTATCCTGTGCGGAAAACGCGGCGCACCCGGCGCGTCG
CGCCCAGCCCAGGAGTTCCG

Downstream 100 bases:

>100_bases
AGATTGCGCCCGCTCGCGTCGGGCGCGCGCGGCGCGCCATACAATGACGGCATCGATCAACGATTCGCAACGAACCGATA
TCGGAGGCCCTCACCATGAC

Product: amylo-alpha-1,6-glucosidase

Products: NA

Alternate protein names: Amylo-Alpha-1 6-Glucosidase; Glycogen Debranching; Glycogen Debranching Protein; Amylo-Alpha-1 6-Glucosidase Family; Glycogen Debranching Family Protein; LOW QUALITY PROTEIN Amylo-Alpha-1 6-Glucosidase; Neutral Invertase; Glycoside Transferase; Amylo-Alpha-1 6-Glucosidase Protein; Glycogen Debranching -Like Protein; Amylo-Alpha-1 6-Glucosidase Family Protein

Number of amino acids: Translated: 776; Mature: 775

Protein sequence:

>776_residues
MPRQADPASPRAPQAAASASSSARCAAPGAAPPQSAQPPQSPQSPQSPQPAPPTPAFIAPEPDAQKAVRGSQFVLKAGDA
FVVSDALGDIAGRDDGLFVDDMRVLSQWRLTFGGRAPSLLSGATSADNASFTAHLTNRPLPPLGGRETPEGVIHIERMRV
LADNVLHEALTLTNYGTCDAEVPLSVSFGADFKDMFEVRGSRRERRGAVAPPCVEAGAVRLRYDGLDAVERSVRIGFEPK
PDTLAVDRADYTLTIAAQACVSLYLTVEARVGAAHAGGDAFARRPCVATGRGALRKALADVHRAMRERRRTIARVHTSNP
LFNAWLDRSLADLGLLTTSLETGPYPYAGIPWFSTPFGRDAVITSLQMLWLQPSLARGVLRFLAEHQARETSAFRDAEPG
KIMHEFRKSEMAATGEVPFALYYGGVDTTPLFVVLAGAYLEYTGDESLIDELWPALERAAQWVSTVCERNPRGLLDYQRT
SARGLANQGWKDSQDSVFHADGRFPSGPIALVEVQAYACAAFDAMATFSRRRGHAADTVRYAQRAKRLREQVEALFWMPE
AGFYGIAVDGHGELCRVLASNAAHLLAFGLPEQSRGESVARVLGSTLFRTGWGVRTLAAGQPRFNPMAYHNGSIWPHDNA
LAARGLARYGDKRAVLDLLRALFEAAVSFDMRLPELFCGFPRRRGEPPTAYPVACLPQAWAAGAPFMMLQACLGISVDAA
RGEVRVERPELPEGVDWLRVDDLRVGGDSVSLTFRRVEGQVVAAAEPGGARVVAVL

Sequences:

>Translated_776_residues
MPRQADPASPRAPQAAASASSSARCAAPGAAPPQSAQPPQSPQSPQSPQPAPPTPAFIAPEPDAQKAVRGSQFVLKAGDA
FVVSDALGDIAGRDDGLFVDDMRVLSQWRLTFGGRAPSLLSGATSADNASFTAHLTNRPLPPLGGRETPEGVIHIERMRV
LADNVLHEALTLTNYGTCDAEVPLSVSFGADFKDMFEVRGSRRERRGAVAPPCVEAGAVRLRYDGLDAVERSVRIGFEPK
PDTLAVDRADYTLTIAAQACVSLYLTVEARVGAAHAGGDAFARRPCVATGRGALRKALADVHRAMRERRRTIARVHTSNP
LFNAWLDRSLADLGLLTTSLETGPYPYAGIPWFSTPFGRDAVITSLQMLWLQPSLARGVLRFLAEHQARETSAFRDAEPG
KIMHEFRKSEMAATGEVPFALYYGGVDTTPLFVVLAGAYLEYTGDESLIDELWPALERAAQWVSTVCERNPRGLLDYQRT
SARGLANQGWKDSQDSVFHADGRFPSGPIALVEVQAYACAAFDAMATFSRRRGHAADTVRYAQRAKRLREQVEALFWMPE
AGFYGIAVDGHGELCRVLASNAAHLLAFGLPEQSRGESVARVLGSTLFRTGWGVRTLAAGQPRFNPMAYHNGSIWPHDNA
LAARGLARYGDKRAVLDLLRALFEAAVSFDMRLPELFCGFPRRRGEPPTAYPVACLPQAWAAGAPFMMLQACLGISVDAA
RGEVRVERPELPEGVDWLRVDDLRVGGDSVSLTFRRVEGQVVAAAEPGGARVVAVL
>Mature_775_residues
PRQADPASPRAPQAAASASSSARCAAPGAAPPQSAQPPQSPQSPQSPQPAPPTPAFIAPEPDAQKAVRGSQFVLKAGDAF
VVSDALGDIAGRDDGLFVDDMRVLSQWRLTFGGRAPSLLSGATSADNASFTAHLTNRPLPPLGGRETPEGVIHIERMRVL
ADNVLHEALTLTNYGTCDAEVPLSVSFGADFKDMFEVRGSRRERRGAVAPPCVEAGAVRLRYDGLDAVERSVRIGFEPKP
DTLAVDRADYTLTIAAQACVSLYLTVEARVGAAHAGGDAFARRPCVATGRGALRKALADVHRAMRERRRTIARVHTSNPL
FNAWLDRSLADLGLLTTSLETGPYPYAGIPWFSTPFGRDAVITSLQMLWLQPSLARGVLRFLAEHQARETSAFRDAEPGK
IMHEFRKSEMAATGEVPFALYYGGVDTTPLFVVLAGAYLEYTGDESLIDELWPALERAAQWVSTVCERNPRGLLDYQRTS
ARGLANQGWKDSQDSVFHADGRFPSGPIALVEVQAYACAAFDAMATFSRRRGHAADTVRYAQRAKRLREQVEALFWMPEA
GFYGIAVDGHGELCRVLASNAAHLLAFGLPEQSRGESVARVLGSTLFRTGWGVRTLAAGQPRFNPMAYHNGSIWPHDNAL
AARGLARYGDKRAVLDLLRALFEAAVSFDMRLPELFCGFPRRRGEPPTAYPVACLPQAWAAGAPFMMLQACLGISVDAAR
GEVRVERPELPEGVDWLRVDDLRVGGDSVSLTFRRVEGQVVAAAEPGGARVVAVL

Specific function: Unknown

COG id: COG3408

COG function: function code G; Glycogen debranching enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83830; Mature: 83699

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRQADPASPRAPQAAASASSSARCAAPGAAPPQSAQPPQSPQSPQSPQPAPPTPAFIAP
CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC
EPDAQKAVRGSQFVLKAGDAFVVSDALGDIAGRDDGLFVDDMRVLSQWRLTFGGRAPSLL
CCCHHHHHCCCEEEEECCCEEEEEHHHHHHCCCCCCEEHHHHHHHHHHHHHCCCCCCHHH
SGATSADNASFTAHLTNRPLPPLGGRETPEGVIHIERMRVLADNVLHEALTLTNYGTCDA
CCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHCCCCCCCC
EVPLSVSFGADFKDMFEVRGSRRERRGAVAPPCVEAGAVRLRYDGLDAVERSVRIGFEPK
CCCEEEECCCCHHHHHHHHCCHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCC
PDTLAVDRADYTLTIAAQACVSLYLTVEARVGAAHAGGDAFARRPCVATGRGALRKALAD
CCCEEEECCCEEEEHHHHHHHHEEEEEEEECCCCCCCCCHHHCCCCCCCCHHHHHHHHHH
VHRAMRERRRTIARVHTSNPLFNAWLDRSLADLGLLTTSLETGPYPYAGIPWFSTPFGRD
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH
AVITSLQMLWLQPSLARGVLRFLAEHQARETSAFRDAEPGKIMHEFRKSEMAATGEVPFA
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEE
LYYGGVDTTPLFVVLAGAYLEYTGDESLIDELWPALERAAQWVSTVCERNPRGLLDYQRT
EEECCCCCCHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
SARGLANQGWKDSQDSVFHADGRFPSGPIALVEVQAYACAAFDAMATFSRRRGHAADTVR
HHCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHH
YAQRAKRLREQVEALFWMPEAGFYGIAVDGHGELCRVLASNAAHLLAFGLPEQSRGESVA
HHHHHHHHHHHHHHHEECCCCCEEEEEECCCHHHHHHHHHCCCEEEEECCCCCCCHHHHH
RVLGSTLFRTGWGVRTLAAGQPRFNPMAYHNGSIWPHDNALAARGLARYGDKRAVLDLLR
HHHHHHHHHCCCCCEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHH
ALFEAAVSFDMRLPELFCGFPRRRGEPPTAYPVACLPQAWAAGAPFMMLQACLGISVDAA
HHHHHHHHHCCCCHHHHHCCCHHCCCCCCCCCHHHCCHHHHCCCHHHHHHHHHCCCEECC
RGEVRVERPELPEGVDWLRVDDLRVGGDSVSLTFRRVEGQVVAAAEPGGARVVAVL
CCCEEEECCCCCCCCCEEEEECEEECCCCEEEEEEEECCEEEEEECCCCCEEEEEC
>Mature Secondary Structure 
PRQADPASPRAPQAAASASSSARCAAPGAAPPQSAQPPQSPQSPQSPQPAPPTPAFIAP
CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC
EPDAQKAVRGSQFVLKAGDAFVVSDALGDIAGRDDGLFVDDMRVLSQWRLTFGGRAPSLL
CCCHHHHHCCCEEEEECCCEEEEEHHHHHHCCCCCCEEHHHHHHHHHHHHHCCCCCCHHH
SGATSADNASFTAHLTNRPLPPLGGRETPEGVIHIERMRVLADNVLHEALTLTNYGTCDA
CCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHCCCCCCCC
EVPLSVSFGADFKDMFEVRGSRRERRGAVAPPCVEAGAVRLRYDGLDAVERSVRIGFEPK
CCCEEEECCCCHHHHHHHHCCHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCC
PDTLAVDRADYTLTIAAQACVSLYLTVEARVGAAHAGGDAFARRPCVATGRGALRKALAD
CCCEEEECCCEEEEHHHHHHHHEEEEEEEECCCCCCCCCHHHCCCCCCCCHHHHHHHHHH
VHRAMRERRRTIARVHTSNPLFNAWLDRSLADLGLLTTSLETGPYPYAGIPWFSTPFGRD
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH
AVITSLQMLWLQPSLARGVLRFLAEHQARETSAFRDAEPGKIMHEFRKSEMAATGEVPFA
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEE
LYYGGVDTTPLFVVLAGAYLEYTGDESLIDELWPALERAAQWVSTVCERNPRGLLDYQRT
EEECCCCCCHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
SARGLANQGWKDSQDSVFHADGRFPSGPIALVEVQAYACAAFDAMATFSRRRGHAADTVR
HHCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHH
YAQRAKRLREQVEALFWMPEAGFYGIAVDGHGELCRVLASNAAHLLAFGLPEQSRGESVA
HHHHHHHHHHHHHHHEECCCCCEEEEEECCCHHHHHHHHHCCCEEEEECCCCCCCHHHHH
RVLGSTLFRTGWGVRTLAAGQPRFNPMAYHNGSIWPHDNALAARGLARYGDKRAVLDLLR
HHHHHHHHHCCCCCEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHH
ALFEAAVSFDMRLPELFCGFPRRRGEPPTAYPVACLPQAWAAGAPFMMLQACLGISVDAA
HHHHHHHHHCCCCHHHHHCCCHHCCCCCCCCCHHHCCHHHHCCCHHHHHHHHHCCCEECC
RGEVRVERPELPEGVDWLRVDDLRVGGDSVSLTFRRVEGQVVAAAEPGGARVVAVL
CCCEEEECCCCCCCCCEEEEECEEECCCCEEEEEEEECCEEEEEECCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA