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The map label for this gene is qseB [H]

Identifier: 126447886

GI number: 126447886

Start: 1564720

End: 1565379

Strand: Reverse

Name: qseB [H]

Synonym: BMA10247_A1624

Alternate gene names: 126447886

Gene position: 1565379-1564720 (Counterclockwise)

Preceding gene: 262192867

Following gene: 126447070

Centisome position: 66.54

GC content: 68.33

Gene sequence:

>660_bases
ATGAGAGTGCTTCTCGTCGAAGACGATCCGTGGCTCGGCGAGGCCGTCCGCGCCCAGATCGAGAAGGACGGGCATCCGAC
CGATTGCGTCGCGAGCCTCGCGCACGCGCGGCGGCACGTCGCGGTCGCGCCCTACGATCTGATCCTGCTCGATCTGCTGC
TGCCCGACGGGCGTGGGCTCGATTTCCTGCGCGAGCTGCGCGCGGGCGGCTCGACGGTGCCCGTCATCATCCTGACCGCG
CTCGATCAGGTCGCGAACCGGATCGCGGGGCTGAACGCCGGCGCCGACGACTATCTGATCAAGCCGTTCGACCTGTCCGA
GTTGTCCGCGCGCGTGAGCGCGGTCGCGCGCCGCTATTCGGGCAATCCGAATCCGCTCGTGAAGCTCGGCGAGCTCGCGG
TCGACATCGCCGCGCGCAGCGTGACGCGCGCCGGCGCGCGGGTCGACCTGACCGCGAGCGAATGGGCGCTGCTCGAAACG
CTGATCCAGCATCCGGGGATGATCCTGTCGAAGCCGCAGCTCGAGGAGCGGCTGTATTCGTTCAGCGACGAAGTCGGCAG
CAATACGATCGAAGTGCATGTGAGCCGCCTGCGCAAGAAGCTCGGCGCCGAGCTGATCGAGACCGTGCGCGGCCTCGGCT
ATCGCCTGAGGCGGGACTAG

Upstream 100 bases:

>100_bases
CGGTACCTGAAGCGAAGCTTGCGAACCCGCCGTTTTTTCTTCATGTTCGCTTCAGGTTCGCGTGGCAGAGTCGCGCCACG
CCATTCACCAGGACACGCGC

Downstream 100 bases:

>100_bases
CGATGCTGCGCAGCCTGCAGGGGCGGCTCTCGGCGGCGCTCGTGGCGGGGCTCGTCGCGCTGTCGGCGGCGGGCGGCGCG
GCCGCGTTCTATGTGCTGCG

Product: DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MRVLLVEDDPWLGEAVRAQIEKDGHPTDCVASLAHARRHVAVAPYDLILLDLLLPDGRGLDFLRELRAGGSTVPVIILTA
LDQVANRIAGLNAGADDYLIKPFDLSELSARVSAVARRYSGNPNPLVKLGELAVDIAARSVTRAGARVDLTASEWALLET
LIQHPGMILSKPQLEERLYSFSDEVGSNTIEVHVSRLRKKLGAELIETVRGLGYRLRRD

Sequences:

>Translated_219_residues
MRVLLVEDDPWLGEAVRAQIEKDGHPTDCVASLAHARRHVAVAPYDLILLDLLLPDGRGLDFLRELRAGGSTVPVIILTA
LDQVANRIAGLNAGADDYLIKPFDLSELSARVSAVARRYSGNPNPLVKLGELAVDIAARSVTRAGARVDLTASEWALLET
LIQHPGMILSKPQLEERLYSFSDEVGSNTIEVHVSRLRKKLGAELIETVRGLGYRLRRD
>Mature_219_residues
MRVLLVEDDPWLGEAVRAQIEKDGHPTDCVASLAHARRHVAVAPYDLILLDLLLPDGRGLDFLRELRAGGSTVPVIILTA
LDQVANRIAGLNAGADDYLIKPFDLSELSARVSAVARRYSGNPNPLVKLGELAVDIAARSVTRAGARVDLTASEWALLET
LIQHPGMILSKPQLEERLYSFSDEVGSNTIEVHVSRLRKKLGAELIETVRGLGYRLRRD

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=216, Percent_Identity=43.9814814814815, Blast_Score=182, Evalue=2e-47,
Organism=Escherichia coli, GI1790552, Length=216, Percent_Identity=39.8148148148148, Blast_Score=159, Evalue=1e-40,
Organism=Escherichia coli, GI1786784, Length=221, Percent_Identity=37.10407239819, Blast_Score=150, Evalue=4e-38,
Organism=Escherichia coli, GI1787375, Length=218, Percent_Identity=37.6146788990826, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI1786911, Length=223, Percent_Identity=38.5650224215247, Blast_Score=136, Evalue=8e-34,
Organism=Escherichia coli, GI87082012, Length=220, Percent_Identity=35, Blast_Score=121, Evalue=3e-29,
Organism=Escherichia coli, GI1786599, Length=222, Percent_Identity=33.7837837837838, Blast_Score=121, Evalue=4e-29,
Organism=Escherichia coli, GI1788394, Length=225, Percent_Identity=34.6666666666667, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1790860, Length=226, Percent_Identity=32.3008849557522, Blast_Score=116, Evalue=9e-28,
Organism=Escherichia coli, GI1789809, Length=225, Percent_Identity=32.4444444444444, Blast_Score=113, Evalue=9e-27,
Organism=Escherichia coli, GI1787229, Length=225, Percent_Identity=33.3333333333333, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI2367329, Length=226, Percent_Identity=33.1858407079646, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI145693140, Length=229, Percent_Identity=30.5676855895196, Blast_Score=86, Evalue=1e-18,
Organism=Escherichia coli, GI1790863, Length=230, Percent_Identity=28.695652173913, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788550, Length=108, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=7e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 23987; Mature: 23987

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLLVEDDPWLGEAVRAQIEKDGHPTDCVASLAHARRHVAVAPYDLILLDLLLPDGRGL
CEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCEEECHHHHHHHHHHCCCCCCH
DFLRELRAGGSTVPVIILTALDQVANRIAGLNAGADDYLIKPFDLSELSARVSAVARRYS
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHC
GNPNPLVKLGELAVDIAARSVTRAGARVDLTASEWALLETLIQHPGMILSKPQLEERLYS
CCCCHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
FSDEVGSNTIEVHVSRLRKKLGAELIETVRGLGYRLRRD
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure
MRVLLVEDDPWLGEAVRAQIEKDGHPTDCVASLAHARRHVAVAPYDLILLDLLLPDGRGL
CEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCEEECHHHHHHHHHHCCCCCCH
DFLRELRAGGSTVPVIILTALDQVANRIAGLNAGADDYLIKPFDLSELSARVSAVARRYS
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHC
GNPNPLVKLGELAVDIAARSVTRAGARVDLTASEWALLETLIQHPGMILSKPQLEERLYS
CCCCHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
FSDEVGSNTIEVHVSRLRKKLGAELIETVRGLGYRLRRD
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]