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The map label for this gene is qseC [H]

Identifier: 126447070

GI number: 126447070

Start: 1563356

End: 1564717

Strand: Reverse

Name: qseC [H]

Synonym: BMA10247_A1623

Alternate gene names: 126447070

Gene position: 1564717-1563356 (Counterclockwise)

Preceding gene: 126447886

Following gene: 126447465

Centisome position: 66.51

GC content: 74.96

Gene sequence:

>1362_bases
ATGCTGCGCAGCCTGCAGGGGCGGCTCTCGGCGGCGCTCGTGGCGGGGCTCGTCGCGCTGTCGGCGGCGGGCGGCGCGGC
CGCGTTCTATGTGCTGCGCGCCGAGGTCGAGCAGATGTCCGACAGCGCGCTGCAGGAAACCGCGCAGCGGCTGCTGCCGC
TCGCCGTGATGGATATCGTCGGGCGCGATTCGGACGGCGACGACGGCGATGGCGGCGGCGGGCGCATCGCGGCGGTTCGC
CCGCACGACGAGCTGCTGACGTACATCGTGCGCGACGAGACGGGCAAGCTGCTGCTGCGCTCGCACGACGCAAACGCGGG
GCTTTTCCCGAAGAACCTGAAGGCAGGCTTCGCCCGCACCGCGACGCATCGGGTCTACGCGGAGACGGTGCTGCAGGGTA
CGGTCACGCTGCTGATCGCGGAGCCGCTCGCGACGCGCCGGCGCGCGGAGGTGCAGGCGGCCTTCGCGGTGGTCAGGCCG
CTCGCGCTGTTCCTGCCGGTCGGCCTGCTCGGGATCTGGCTGATCGTGCGCTCCGGCCTCACGCCGATCCGGCGCTTCTG
CGGCGCGATCGCCGCGCGCGGCCGCAACGATCTGACGCCGCTCGACAAGGGGGGGCTGCCGGCCGAGATCGCGCCCGTCG
CCGATGCGGTCACCGAGCTGATGGCGCGGCTCGATCGCGCGCTCGCGGCCGAGCGCAGCTTCGCCGCGAACAGCGCGCAC
GAGCTGCGCACGCCGATCGCCGCGGCGCTCGCGCAGACGCAGCGGCTGATCGCCGAGGCGCCCGCCGAGCCGTTGCGCGA
GCGCGCGCGGCGGGTCGAGGGGGCGCTGCATACGCTGTCGCGGGTCAGCGAGCAACTGATGCAGCTCGCGAAGGCCGAGG
ACGGGCGCGTGCTCGCGGATACGCCGCAGGATCTGCGGCCGGTGCTCGCGCTCGTCGTCGACGATTTCCGGCGCGGCGCG
CGCGATCGCGCGATCGCGCTCGAGTTGCCCGATACGGCCGTGACCTCGCGGATCGATCCGGACGCGTTCGCGATCGTCGT
GCGCAACCTGGTCGAGAACGCGCTCAAGCACGGCGCGGCGGCGGAGCCGGTGCGGGTCGCGCTGTCCGCCGCCGGCGCGC
TCAGCGTGACGAACCGCGGGCCGGTGCTCGCGGCCGCGGAGCTCGAGCGCCTGACGAAGCCGTTCGAGCGCGGCGCGACG
GCGGCGAAGGGCAGCGGCCTCGGGCTCGCGATCGTCGACGCGATCGCGAAGGGCGCGGGCGCGTCGTTCACGCTGCGCTC
GCCGGCGCCGGGCGTAACGGACGGCGTTCAGGCGCGGGTGGACGGCCTCGCGTGCGGCGGCGGGCCGGCCGCGAAGGGGT
GA

Upstream 100 bases:

>100_bases
ATACGATCGAAGTGCATGTGAGCCGCCTGCGCAAGAAGCTCGGCGCCGAGCTGATCGAGACCGTGCGCGGCCTCGGCTAT
CGCCTGAGGCGGGACTAGCG

Downstream 100 bases:

>100_bases
GCGGGCATGGGCGAGCGGGCGCGGCGGGGCGCCGCGCGTTCGCGCGCGCCGCCGCCGAAACGGATCCCGCAGCGTCGCGC
CGCCCGGCGCGGGCAGATTC

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MLRSLQGRLSAALVAGLVALSAAGGAAAFYVLRAEVEQMSDSALQETAQRLLPLAVMDIVGRDSDGDDGDGGGGRIAAVR
PHDELLTYIVRDETGKLLLRSHDANAGLFPKNLKAGFARTATHRVYAETVLQGTVTLLIAEPLATRRRAEVQAAFAVVRP
LALFLPVGLLGIWLIVRSGLTPIRRFCGAIAARGRNDLTPLDKGGLPAEIAPVADAVTELMARLDRALAAERSFAANSAH
ELRTPIAAALAQTQRLIAEAPAEPLRERARRVEGALHTLSRVSEQLMQLAKAEDGRVLADTPQDLRPVLALVVDDFRRGA
RDRAIALELPDTAVTSRIDPDAFAIVVRNLVENALKHGAAAEPVRVALSAAGALSVTNRGPVLAAAELERLTKPFERGAT
AAKGSGLGLAIVDAIAKGAGASFTLRSPAPGVTDGVQARVDGLACGGGPAAKG

Sequences:

>Translated_453_residues
MLRSLQGRLSAALVAGLVALSAAGGAAAFYVLRAEVEQMSDSALQETAQRLLPLAVMDIVGRDSDGDDGDGGGGRIAAVR
PHDELLTYIVRDETGKLLLRSHDANAGLFPKNLKAGFARTATHRVYAETVLQGTVTLLIAEPLATRRRAEVQAAFAVVRP
LALFLPVGLLGIWLIVRSGLTPIRRFCGAIAARGRNDLTPLDKGGLPAEIAPVADAVTELMARLDRALAAERSFAANSAH
ELRTPIAAALAQTQRLIAEAPAEPLRERARRVEGALHTLSRVSEQLMQLAKAEDGRVLADTPQDLRPVLALVVDDFRRGA
RDRAIALELPDTAVTSRIDPDAFAIVVRNLVENALKHGAAAEPVRVALSAAGALSVTNRGPVLAAAELERLTKPFERGAT
AAKGSGLGLAIVDAIAKGAGASFTLRSPAPGVTDGVQARVDGLACGGGPAAKG
>Mature_453_residues
MLRSLQGRLSAALVAGLVALSAAGGAAAFYVLRAEVEQMSDSALQETAQRLLPLAVMDIVGRDSDGDDGDGGGGRIAAVR
PHDELLTYIVRDETGKLLLRSHDANAGLFPKNLKAGFARTATHRVYAETVLQGTVTLLIAEPLATRRRAEVQAAFAVVRP
LALFLPVGLLGIWLIVRSGLTPIRRFCGAIAARGRNDLTPLDKGGLPAEIAPVADAVTELMARLDRALAAERSFAANSAH
ELRTPIAAALAQTQRLIAEAPAEPLRERARRVEGALHTLSRVSEQLMQLAKAEDGRVLADTPQDLRPVLALVVDDFRRGA
RDRAIALELPDTAVTSRIDPDAFAIVVRNLVENALKHGAAAEPVRVALSAAGALSVTNRGPVLAAAELERLTKPFERGAT
AAKGSGLGLAIVDAIAKGAGASFTLRSPAPGVTDGVQARVDGLACGGGPAAKG

Specific function: Member of a two-component regulatory system qseB/qseC. May activate qseB by phosphorylation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=420, Percent_Identity=25, Blast_Score=92, Evalue=7e-20,
Organism=Escherichia coli, GI1788279, Length=261, Percent_Identity=27.9693486590038, Blast_Score=89, Evalue=8e-19,
Organism=Escherichia coli, GI1790551, Length=297, Percent_Identity=27.2727272727273, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1786783, Length=288, Percent_Identity=26.3888888888889, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1788393, Length=272, Percent_Identity=25.3676470588235, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI87082128, Length=308, Percent_Identity=25.6493506493506, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1790436, Length=226, Percent_Identity=29.646017699115, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 47256; Mature: 47256

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRSLQGRLSAALVAGLVALSAAGGAAAFYVLRAEVEQMSDSALQETAQRLLPLAVMDIV
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRDSDGDDGDGGGGRIAAVRPHDELLTYIVRDETGKLLLRSHDANAGLFPKNLKAGFART
CCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHH
ATHRVYAETVLQGTVTLLIAEPLATRRRAEVQAAFAVVRPLALFLPVGLLGIWLIVRSGL
HHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TPIRRFCGAIAARGRNDLTPLDKGGLPAEIAPVADAVTELMARLDRALAAERSFAANSAH
HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ELRTPIAAALAQTQRLIAEAPAEPLRERARRVEGALHTLSRVSEQLMQLAKAEDGRVLAD
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECC
TPQDLRPVLALVVDDFRRGARDRAIALELPDTAVTSRIDPDAFAIVVRNLVENALKHGAA
CCHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
AEPVRVALSAAGALSVTNRGPVLAAAELERLTKPFERGATAAKGSGLGLAIVDAIAKGAG
CCHHHHHHHHCCEEEECCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
ASFTLRSPAPGVTDGVQARVDGLACGGGPAAKG
CEEEECCCCCCCCCCHHHHHCCEEECCCCCCCC
>Mature Secondary Structure
MLRSLQGRLSAALVAGLVALSAAGGAAAFYVLRAEVEQMSDSALQETAQRLLPLAVMDIV
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRDSDGDDGDGGGGRIAAVRPHDELLTYIVRDETGKLLLRSHDANAGLFPKNLKAGFART
CCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHH
ATHRVYAETVLQGTVTLLIAEPLATRRRAEVQAAFAVVRPLALFLPVGLLGIWLIVRSGL
HHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TPIRRFCGAIAARGRNDLTPLDKGGLPAEIAPVADAVTELMARLDRALAAERSFAANSAH
HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ELRTPIAAALAQTQRLIAEAPAEPLRERARRVEGALHTLSRVSEQLMQLAKAEDGRVLAD
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECC
TPQDLRPVLALVVDDFRRGARDRAIALELPDTAVTSRIDPDAFAIVVRNLVENALKHGAA
CCHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
AEPVRVALSAAGALSVTNRGPVLAAAELERLTKPFERGATAAKGSGLGLAIVDAIAKGAG
CCHHHHHHHHCCEEEECCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
ASFTLRSPAPGVTDGVQARVDGLACGGGPAAKG
CEEEECCCCCCCCCCHHHHHCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]