| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is benB [H]
Identifier: 126447624
GI number: 126447624
Start: 181823
End: 182314
Strand: Reverse
Name: benB [H]
Synonym: BMA10247_A0214
Alternate gene names: 126447624
Gene position: 182314-181823 (Counterclockwise)
Preceding gene: 126446977
Following gene: 126445721
Centisome position: 7.75
GC content: 61.38
Gene sequence:
>492_bases ATGAAGACGATCGATCTCGCCGACATCCAGGCGTTCCTCTATCGCGAGAGCCGGCTGCTCGACGACAAGGCGTGGGACGC ATGGCTCGACTGCTATCGCGCGGACGCCGTGTTCTGGATGCCTTCCTGGGACGACGCGGATGCGCTCGTCACCGATCCGC AGCGCGAAATCTCGCTGATCTACTACCCGAACCGGCAGGGGCTCGAGGATCGCGTGTTCCGCATCAAGACCGAGCGCTCG AGCGCGACGGTGCCCGATACGCGCACGAGCCACAACATCGCGAACGTCGAGCGCGAAAGCGCCGATGGCGACGTGCACAC CGTGCGCTTCAACTGGCACACGCTCAGCTATCGCTACAAGACGGTGTCGAGCTATTTCGGCATGTCGCGCTACGCGATCG ATTTCTCCGGCGACGCGCCGAAGATCGTCAGCAAGTACGTCGTCCTGAAGAACGACTACATCAACCAGCTGATCGACATC TACCACATCTAG
Upstream 100 bases:
>100_bases TGAGCGGCGTGAAGACCGAGGACGAAGGGCTGTACACGGTCCAGCACCGCTACTGGATCGCGACGATGAAGCAGGCGCTC GCCGCCGAAAGGAGCGGCGC
Downstream 100 bases:
>100_bases CCGGTGCGCGCCGCGGCAGCGCGGCCCGCTCGAGGAACGCATCATGGAACACCGCATCGCCCTGCAGTTCGAAGACGGCG TCACCCGCTTCATCGCCTGC
Product: benzoate 1,2-dioxygenase beta subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MKTIDLADIQAFLYRESRLLDDKAWDAWLDCYRADAVFWMPSWDDADALVTDPQREISLIYYPNRQGLEDRVFRIKTERS SATVPDTRTSHNIANVERESADGDVHTVRFNWHTLSYRYKTVSSYFGMSRYAIDFSGDAPKIVSKYVVLKNDYINQLIDI YHI
Sequences:
>Translated_163_residues MKTIDLADIQAFLYRESRLLDDKAWDAWLDCYRADAVFWMPSWDDADALVTDPQREISLIYYPNRQGLEDRVFRIKTERS SATVPDTRTSHNIANVERESADGDVHTVRFNWHTLSYRYKTVSSYFGMSRYAIDFSGDAPKIVSKYVVLKNDYINQLIDI YHI >Mature_163_residues MKTIDLADIQAFLYRESRLLDDKAWDAWLDCYRADAVFWMPSWDDADALVTDPQREISLIYYPNRQGLEDRVFRIKTERS SATVPDTRTSHNIANVERESADGDVHTVRFNWHTLSYRYKTVSSYFGMSRYAIDFSGDAPKIVSKYVVLKNDYINQLIDI YHI
Specific function: Degradation of benzoate to 2-hydro-1,2-dihydroxybenzoate (DHB). The beta subunit may be responsible for the substrate specificity of the enzyme [H]
COG id: COG5517
COG function: function code Q; Small subunit of phenylpropionate dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial ring-hydroxylating dioxygenase beta subunit family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017641 - InterPro: IPR000391 [H]
Pfam domain/function: PF00866 Ring_hydroxyl_B [H]
EC number: =1.14.12.10 [H]
Molecular weight: Translated: 19132; Mature: 19132
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTIDLADIQAFLYRESRLLDDKAWDAWLDCYRADAVFWMPSWDDADALVTDPQREISLI CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEECCCCCEEEE YYPNRQGLEDRVFRIKTERSSATVPDTRTSHNIANVERESADGDVHTVRFNWHTLSYRYK ECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEE TVSSYFGMSRYAIDFSGDAPKIVSKYVVLKNDYINQLIDIYHI HHHHHCCCEEEEEEECCCCHHHHHHEEEECHHHHHHHHHHHCC >Mature Secondary Structure MKTIDLADIQAFLYRESRLLDDKAWDAWLDCYRADAVFWMPSWDDADALVTDPQREISLI CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEECCCCCEEEE YYPNRQGLEDRVFRIKTERSSATVPDTRTSHNIANVERESADGDVHTVRFNWHTLSYRYK ECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEE TVSSYFGMSRYAIDFSGDAPKIVSKYVVLKNDYINQLIDIYHI HHHHHCCCEEEEEEECCCCHHHHHHEEEECHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1885518 [H]