| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126447514
Identifier: 126447514
GI number: 126447514
Start: 1774711
End: 1775841
Strand: Reverse
Name: 126447514
Synonym: BMA10247_A1842
Alternate gene names: NA
Gene position: 1775841-1774711 (Counterclockwise)
Preceding gene: 126445873
Following gene: 126445948
Centisome position: 75.48
GC content: 74.18
Gene sequence:
>1131_bases ATGCGCACACGAGATCTGGGCATTCGCATCGGCCGCGGCAAGCCGGGGCGCCTGAACGCCATCACCGACGTCGCCGGCGT GCGGGTCGGGCACCACACGGTGCACGTCGAGGCGGGCGACGCGTCGGCGCACACCGGCGTGACGGTGATCGAGCCGCGCG CCGCGCGCGCGCGCGACGAGCCGTGCTTCGCGGGCGTTCACGTGCTCAACGGCAACGGCGACGCGACCGGGCTCGAATGG ATTCGCGAGGCGGGGCTGCTGACGACGCCGATCGCCTATACGAACACGCACAGCGTCGGCATCGTGCGCGATGCGCTCGT CGCCGCCGAGCGCGCGCAGGGCGGCGCGCGCGAGCGCGAGCACGTGTACTGGTGCATGCCGGTCGTGATGGAGACGTTCG ACGGACTCCTGAACGACATCTGGGGGCAGCACGTGTGCGTCGGGCACGTCGCGCAGGCGCTCGCCGCCGCGCGTTCGGAC CCGGTCGCGGAAGGCTGCGTCGGCGGCGGCACCGGCATGATCTGCCACGAGTTCAAGGGCGGCATCGGCACCGCGTCGCG CGTCGTCGCCGAAGCGGCGGGCGGCTGGACGGTCGGCGCGCTCGTGCAGGCGAACTACGGGCAGCGCGCGGCGCTGCGCG TCGCGGGCTACCCGGTCGGCGAAGTGCTGCGCGACGCGCACTCGCCGTTCGACGAGGCGGGCGGGGCGGGCGAGCCCGGC ATGGGCTCGATCGTCGTGACGCTCGCGACCGACGCGCCGCTGCTGCCGCATCAATGCACGCGGCTCGCGCAGCGCGCGAG CGTCGGGCTCGCGCGCGTCGGCGGCGGCACCGACAATTCGAGCGGCGACATTTTCGTGGCGTTCGCAACCGGCAATACCG GGCTGCCGATCGTGAGCTATGGCCGGCCGGGCCCGACGACGGTCGGCGTGCGGATGGTCGCCGACGCGCACATCTCCGCC CTGTTCGACGCGGCGGTGGAAGCGGTCGAGGAGGCGATCGTCAACGCGCTCGTCGCGGCGACCGATCTCGCGGCGCGCGG CGTGCGCGTCGAGGCGCTCGGCGCCGCGCGGCTCGTCGATGCGTTGCGCGAGACCGGCTGGCGCCCGCGCGCGGGCGACG CTCAGCTATAG
Upstream 100 bases:
>100_bases TCTCGCTCGCGGCCTACGCGCGCTGGGCGCGCCGCAGCGCGGCGTTTCGCGAACTCTGAACCATGAACCGGGCAACGAAC CGAAAGAGAGGACCATCAGC
Downstream 100 bases:
>100_bases CCGTGGCAGCGTCTGAGGCCCGCGTAGTCGTAGAAGCGGCTGCCGGGCGCGATGCGCGCGCCGTCGCACGCGGGCTGGAA ATCGGTCTCGCGCTCGTTGT
Product: putative D-aminopeptidase
Products: NA
Alternate protein names: D-Aminopeptidase; Aminopeptidase DmpA; Aminopeptidase; L-Aminopeptidase/D-Esterase; Peptidase S; T4 Family Peptidase; Peptidase T4 Family; Family; L-Aminopeptidase DmpA; S58 Family Peptidase; D-Amino Peptidase Dmpa Family; Serine Peptidase; L-Aminopeptidase Dmpa; Aminopeptidase DpmA; D-Alanine-D-Alanine Ligase / Aminopeptidase; Peptidase Family; Aminopeptidase-Like Protein; D-Aminopeptidease; D-AMINO PEPTIDASE DmpA Family; L-Aminopeptidase D-Ala-Esterase/Amidase
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MRTRDLGIRIGRGKPGRLNAITDVAGVRVGHHTVHVEAGDASAHTGVTVIEPRAARARDEPCFAGVHVLNGNGDATGLEW IREAGLLTTPIAYTNTHSVGIVRDALVAAERAQGGAREREHVYWCMPVVMETFDGLLNDIWGQHVCVGHVAQALAAARSD PVAEGCVGGGTGMICHEFKGGIGTASRVVAEAAGGWTVGALVQANYGQRAALRVAGYPVGEVLRDAHSPFDEAGGAGEPG MGSIVVTLATDAPLLPHQCTRLAQRASVGLARVGGGTDNSSGDIFVAFATGNTGLPIVSYGRPGPTTVGVRMVADAHISA LFDAAVEAVEEAIVNALVAATDLAARGVRVEALGAARLVDALRETGWRPRAGDAQL
Sequences:
>Translated_376_residues MRTRDLGIRIGRGKPGRLNAITDVAGVRVGHHTVHVEAGDASAHTGVTVIEPRAARARDEPCFAGVHVLNGNGDATGLEW IREAGLLTTPIAYTNTHSVGIVRDALVAAERAQGGAREREHVYWCMPVVMETFDGLLNDIWGQHVCVGHVAQALAAARSD PVAEGCVGGGTGMICHEFKGGIGTASRVVAEAAGGWTVGALVQANYGQRAALRVAGYPVGEVLRDAHSPFDEAGGAGEPG MGSIVVTLATDAPLLPHQCTRLAQRASVGLARVGGGTDNSSGDIFVAFATGNTGLPIVSYGRPGPTTVGVRMVADAHISA LFDAAVEAVEEAIVNALVAATDLAARGVRVEALGAARLVDALRETGWRPRAGDAQL >Mature_376_residues MRTRDLGIRIGRGKPGRLNAITDVAGVRVGHHTVHVEAGDASAHTGVTVIEPRAARARDEPCFAGVHVLNGNGDATGLEW IREAGLLTTPIAYTNTHSVGIVRDALVAAERAQGGAREREHVYWCMPVVMETFDGLLNDIWGQHVCVGHVAQALAAARSD PVAEGCVGGGTGMICHEFKGGIGTASRVVAEAAGGWTVGALVQANYGQRAALRVAGYPVGEVLRDAHSPFDEAGGAGEPG MGSIVVTLATDAPLLPHQCTRLAQRASVGLARVGGGTDNSSGDIFVAFATGNTGLPIVSYGRPGPTTVGVRMVADAHISA LFDAAVEAVEEAIVNALVAATDLAARGVRVEALGAARLVDALRETGWRPRAGDAQL
Specific function: Unknown
COG id: COG3191
COG function: function code EQ; L-aminopeptidase/D-esterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38722; Mature: 38722
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTRDLGIRIGRGKPGRLNAITDVAGVRVGHHTVHVEAGDASAHTGVTVIEPRAARARDE CCCCCCEEEECCCCCCCCCHHHHHHHEEECCEEEEEECCCCCCCCCEEEECCCHHCCCCC PCFAGVHVLNGNGDATGLEWIREAGLLTTPIAYTNTHSVGIVRDALVAAERAQGGARERE CCEEEEEEEECCCCCHHHHHHHHCCCEECCEEECCCCCCHHHHHHHHHHHHHCCCCCCCC HVYWCMPVVMETFDGLLNDIWGQHVCVGHVAQALAAARSDPVAEGCVGGGTGMICHEFKG CEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCEEEHHHCC GIGTASRVVAEAAGGWTVGALVQANYGQRAALRVAGYPVGEVLRDAHSPFDEAGGAGEPG CCCHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECCCCHHHHHHHHCCCHHHCCCCCCCC MGSIVVTLATDAPLLPHQCTRLAQRASVGLARVGGGTDNSSGDIFVAFATGNTGLPIVSY CCEEEEEEECCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEEECCCCCCEEEC GRPGPTTVGVRMVADAHISALFDAAVEAVEEAIVNALVAATDLAARGVRVEALGAARLVD CCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHH ALRETGWRPRAGDAQL HHHHCCCCCCCCCCCC >Mature Secondary Structure MRTRDLGIRIGRGKPGRLNAITDVAGVRVGHHTVHVEAGDASAHTGVTVIEPRAARARDE CCCCCCEEEECCCCCCCCCHHHHHHHEEECCEEEEEECCCCCCCCCEEEECCCHHCCCCC PCFAGVHVLNGNGDATGLEWIREAGLLTTPIAYTNTHSVGIVRDALVAAERAQGGARERE CCEEEEEEEECCCCCHHHHHHHHCCCEECCEEECCCCCCHHHHHHHHHHHHHCCCCCCCC HVYWCMPVVMETFDGLLNDIWGQHVCVGHVAQALAAARSDPVAEGCVGGGTGMICHEFKG CEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCEEEHHHCC GIGTASRVVAEAAGGWTVGALVQANYGQRAALRVAGYPVGEVLRDAHSPFDEAGGAGEPG CCCHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECCCCHHHHHHHHCCCHHHCCCCCCCC MGSIVVTLATDAPLLPHQCTRLAQRASVGLARVGGGTDNSSGDIFVAFATGNTGLPIVSY CCEEEEEEECCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEEECCCCCCEEEC GRPGPTTVGVRMVADAHISALFDAAVEAVEEAIVNALVAATDLAARGVRVEALGAARLVD CCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHH ALRETGWRPRAGDAQL HHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA