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The map label for this gene is omp32 [H]

Identifier: 126447061

GI number: 126447061

Start: 2255656

End: 2256786

Strand: Reverse

Name: omp32 [H]

Synonym: BMA10247_A2327

Alternate gene names: 126447061

Gene position: 2256786-2255656 (Counterclockwise)

Preceding gene: 126447266

Following gene: 126445698

Centisome position: 95.92

GC content: 69.05

Gene sequence:

>1131_bases
ATGATGAACGCGAAATCGATCGCGGCGGCGGCGCTCGCCGTCGCGCAGGCGGGCCTCGCCCACGCACAATCGTCGGTCAC
GCTGTACGGCGCGCTCGATGCGGGCGTTCTGTGGCAGAACACGTCCGCCGCGTCGTTCAGCCCGACGGCGCCGAATACGG
GCGCCGTCGTGCGCTTCAAGGACGGCGGCGTCTATTCGAGCCTCTGGGGCATCAAGGGAACGGAGGATCTCGGCGGCGGC
TACCGCGTGAATTTTCGGCTGCAAGGCGCGTTCGACGGCGGCACCGGCAAGTTCGGGCTGAGCGACGCGCCCGGTGCGGT
CGCCGCGTTCAATCAGATCGCGACGCTCGGCGTGTCCGGGCCGTTCGGCACGTTCAACGCGGGCCGGCAGATCGTACCGA
TGATCTACGCGATGGCCGACACCGACGTGCGCGCGGCGCGCTTCTTCGGCAGCGTGCTGACCGCTTGGCTCGGCCTGAAT
ACCGCGGCCGGCTGGCCGGGCAACAGCACGAACGCGCCGATCGGCGCGCTCTACGACAGCGATGCGCTCGTCTACCAGTC
GCCCGCGTTCGGCGGCGCGTCGCTCGCGCTCGAGTACGCGCCGGGCGGTGTGCCCGGCGGCGTGCAGCGCGGCGCGCGCG
CGTCGATCGTGCTCAAGTACGCGTCGAACGCGCTCAACCTGGCCGCCGTCTATTACAACGGCCACGACACGAATCCGGCG
CCGGGCGCGAGCGCGACGGGACTCGACAACAACCGCTTCGTCTACGTCGGCGCGCAGTACAAGCTGAAGGATGTCGCGGT
GTCGGCGTCGTACGGCAACGGCCGGAATCCCGCGCGCGGCGATCGCGTGAACCTCGACATGTTCGCGTTCGGGCTCGGCT
ACCGCGTGTCGCCGTTCTTTCGCGTGAGCTCGGGCGTCTACTACCTGAAGGACCGGAACCGTTCGGCGAACCGGTCGACG
TCGATCGTGCTCGGCGCCGATTACGAGCTGTCCAAGCACACCACGCTATATGCGCAGGGGGGGCGCGTCGACAATCGCGG
CACGATGGCTCAGATGCTGGCGTACGGGCAGCCGGTCGCGCCGGGGCTCGCGACGACCGCCGCGATGCTAGGGATGCGTC
ATTCGTTCTAG

Upstream 100 bases:

>100_bases
CGCCTCGTCGAGCGGATCGACTGACGCGGTCGCAACACGGCCACCGTCAGCCTCGATGCTGCCGGGCCATTTCCCCGACA
TGGGAGACATGATGGGAGAC

Downstream 100 bases:

>100_bases
ATCGCGTCGGATCACTCGCCGGTTCGCCTGCCGGATCGCCCGCCATCCGCCGATTCCGGCTTCCGACGAGGGAACGCTGC
ATGCTCGCCGATCGAGCGTC

Product: putative outer membrane porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MMNAKSIAAAALAVAQAGLAHAQSSVTLYGALDAGVLWQNTSAASFSPTAPNTGAVVRFKDGGVYSSLWGIKGTEDLGGG
YRVNFRLQGAFDGGTGKFGLSDAPGAVAAFNQIATLGVSGPFGTFNAGRQIVPMIYAMADTDVRAARFFGSVLTAWLGLN
TAAGWPGNSTNAPIGALYDSDALVYQSPAFGGASLALEYAPGGVPGGVQRGARASIVLKYASNALNLAAVYYNGHDTNPA
PGASATGLDNNRFVYVGAQYKLKDVAVSASYGNGRNPARGDRVNLDMFAFGLGYRVSPFFRVSSGVYYLKDRNRSANRST
SIVLGADYELSKHTTLYAQGGRVDNRGTMAQMLAYGQPVAPGLATTAAMLGMRHSF

Sequences:

>Translated_376_residues
MMNAKSIAAAALAVAQAGLAHAQSSVTLYGALDAGVLWQNTSAASFSPTAPNTGAVVRFKDGGVYSSLWGIKGTEDLGGG
YRVNFRLQGAFDGGTGKFGLSDAPGAVAAFNQIATLGVSGPFGTFNAGRQIVPMIYAMADTDVRAARFFGSVLTAWLGLN
TAAGWPGNSTNAPIGALYDSDALVYQSPAFGGASLALEYAPGGVPGGVQRGARASIVLKYASNALNLAAVYYNGHDTNPA
PGASATGLDNNRFVYVGAQYKLKDVAVSASYGNGRNPARGDRVNLDMFAFGLGYRVSPFFRVSSGVYYLKDRNRSANRST
SIVLGADYELSKHTTLYAQGGRVDNRGTMAQMLAYGQPVAPGLATTAAMLGMRHSF
>Mature_376_residues
MMNAKSIAAAALAVAQAGLAHAQSSVTLYGALDAGVLWQNTSAASFSPTAPNTGAVVRFKDGGVYSSLWGIKGTEDLGGG
YRVNFRLQGAFDGGTGKFGLSDAPGAVAAFNQIATLGVSGPFGTFNAGRQIVPMIYAMADTDVRAARFFGSVLTAWLGLN
TAAGWPGNSTNAPIGALYDSDALVYQSPAFGGASLALEYAPGGVPGGVQRGARASIVLKYASNALNLAAVYYNGHDTNPA
PGASATGLDNNRFVYVGAQYKLKDVAVSASYGNGRNPARGDRVNLDMFAFGLGYRVSPFFRVSSGVYYLKDRNRSANRST
SIVLGADYELSKHTTLYAQGGRVDNRGTMAQMLAYGQPVAPGLATTAAMLGMRHSF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 38970; Mature: 38970

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNAKSIAAAALAVAQAGLAHAQSSVTLYGALDAGVLWQNTSAASFSPTAPNTGAVVRFK
CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEE
DGGVYSSLWGIKGTEDLGGGYRVNFRLQGAFDGGTGKFGLSDAPGAVAAFNQIATLGVSG
CCCEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHEEECCC
PFGTFNAGRQIVPMIYAMADTDVRAARFFGSVLTAWLGLNTAAGWPGNSTNAPIGALYDS
CCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECC
DALVYQSPAFGGASLALEYAPGGVPGGVQRGARASIVLKYASNALNLAAVYYNGHDTNPA
CEEEEECCCCCCCEEEEEECCCCCCHHHHCCCCEEEEEEECCCCEEEEEEEECCCCCCCC
PGASATGLDNNRFVYVGAQYKLKDVAVSASYGNGRNPARGDRVNLDMFAFGLGYRVSPFF
CCCCCCCCCCCEEEEEECCEEEEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCEEE
RVSSGVYYLKDRNRSANRSTSIVLGADYELSKHTTLYAQGGRVDNRGTMAQMLAYGQPVA
EECCCEEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEECCEECCCCHHHHHHHCCCCCC
PGLATTAAMLGMRHSF
CHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMNAKSIAAAALAVAQAGLAHAQSSVTLYGALDAGVLWQNTSAASFSPTAPNTGAVVRFK
CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEE
DGGVYSSLWGIKGTEDLGGGYRVNFRLQGAFDGGTGKFGLSDAPGAVAAFNQIATLGVSG
CCCEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHEEECCC
PFGTFNAGRQIVPMIYAMADTDVRAARFFGSVLTAWLGLNTAAGWPGNSTNAPIGALYDS
CCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECC
DALVYQSPAFGGASLALEYAPGGVPGGVQRGARASIVLKYASNALNLAAVYYNGHDTNPA
CEEEEECCCCCCCEEEEEECCCCCCHHHHCCCCEEEEEEECCCCEEEEEEEECCCCCCCC
PGASATGLDNNRFVYVGAQYKLKDVAVSASYGNGRNPARGDRVNLDMFAFGLGYRVSPFF
CCCCCCCCCCCEEEEEECCEEEEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCEEE
RVSSGVYYLKDRNRSANRSTSIVLGADYELSKHTTLYAQGGRVDNRGTMAQMLAYGQPVA
EECCCEEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEECCEECCCCHHHHHHHCCCCCC
PGLATTAAMLGMRHSF
CHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]