| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126446967
Identifier: 126446967
GI number: 126446967
Start: 1742715
End: 1743239
Strand: Reverse
Name: 126446967
Synonym: BMA10247_A1808
Alternate gene names: NA
Gene position: 1743239-1742715 (Counterclockwise)
Preceding gene: 126446978
Following gene: 126446245
Centisome position: 74.1
GC content: 65.33
Gene sequence:
>525_bases ATGGCGCCTCGATTCGTTCGGAAAGCGTATCCGGCGGCGGTTTCGCCGTTTCCGAGCATTGTATTTTTCCCGTTATGCCG GATTGAACCGCAGCAGAGGCAAGGATTCATGTCCCGTTCCGTTTTCGAGGCCGTACGGCTGGACGACGTCGTATTGCAAC CTTCCCCGATCGATCCCGGCTGGATCATCGAAGGCGCGCCCGTCGCGCGCAGCGGCCGGTGGTCGTGCAGCCCCGATTCG ACGACGTCGATGTGGGTCTGGGATTGCACCGCGGGGCGCTTCAACTGGTACTTCGACTGCGACGAGACCATCCACGTGAT CGAAGGCGAGGTGATCGTCTCGTCGGACGGCGACGCGCCGCGCACGCTGCGTGCGGGCGACGCCGCGCTGTTCTACGCGG GCAGCCGCACCGAGTGGCACGTGCCGAAGTACGTGCGCAAGCACGCGATCCTGCGCCCGCACATCGCCGGGCCGGCGCTG TTCGTCCACAAGGCGTTCCGCAAGCTGGCAAGCGCGTTGCGGTGA
Upstream 100 bases:
>100_bases GCCACGATTCGATCGCCGCCGCGCCATCCGCGCGGCGAAAGTGTGCTCTATTACAAATCGTAAAAATCGTCCTTGCGCCG CCGAAAACAAAGCTTGCAAA
Downstream 100 bases:
>100_bases CGGCGTGAAGGGCGCGCGAAGCGCCGCGGCCCCACGCGTGCGAGACGCTCGCGCGTTTCGTGCACATCGCGCGTCGCGCG TCGCGTCATTTCGCGTCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MAPRFVRKAYPAAVSPFPSIVFFPLCRIEPQQRQGFMSRSVFEAVRLDDVVLQPSPIDPGWIIEGAPVARSGRWSCSPDS TTSMWVWDCTAGRFNWYFDCDETIHVIEGEVIVSSDGDAPRTLRAGDAALFYAGSRTEWHVPKYVRKHAILRPHIAGPAL FVHKAFRKLASALR
Sequences:
>Translated_174_residues MAPRFVRKAYPAAVSPFPSIVFFPLCRIEPQQRQGFMSRSVFEAVRLDDVVLQPSPIDPGWIIEGAPVARSGRWSCSPDS TTSMWVWDCTAGRFNWYFDCDETIHVIEGEVIVSSDGDAPRTLRAGDAALFYAGSRTEWHVPKYVRKHAILRPHIAGPAL FVHKAFRKLASALR >Mature_173_residues APRFVRKAYPAAVSPFPSIVFFPLCRIEPQQRQGFMSRSVFEAVRLDDVVLQPSPIDPGWIIEGAPVARSGRWSCSPDST TSMWVWDCTAGRFNWYFDCDETIHVIEGEVIVSSDGDAPRTLRAGDAALFYAGSRTEWHVPKYVRKHAILRPHIAGPALF VHKAFRKLASALR
Specific function: Unknown
COG id: COG3450
COG function: function code R; Predicted enzyme of the cupin superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19561; Mature: 19429
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPRFVRKAYPAAVSPFPSIVFFPLCRIEPQQRQGFMSRSVFEAVRLDDVVLQPSPIDPG CCCHHHHHHCCCCCCCCCHHEEHHHHCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCCC WIIEGAPVARSGRWSCSPDSTTSMWVWDCTAGRFNWYFDCDETIHVIEGEVIVSSDGDAP EEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECEEEEECCCCCC RTLRAGDAALFYAGSRTEWHVPKYVRKHAILRPHIAGPALFVHKAFRKLASALR CEEECCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure APRFVRKAYPAAVSPFPSIVFFPLCRIEPQQRQGFMSRSVFEAVRLDDVVLQPSPIDPG CCHHHHHHCCCCCCCCCHHEEHHHHCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCCC WIIEGAPVARSGRWSCSPDSTTSMWVWDCTAGRFNWYFDCDETIHVIEGEVIVSSDGDAP EEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECEEEEECCCCCC RTLRAGDAALFYAGSRTEWHVPKYVRKHAILRPHIAGPALFVHKAFRKLASALR CEEECCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA