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The map label for this gene is yvrE [H]

Identifier: 126446978

GI number: 126446978

Start: 1743796

End: 1744731

Strand: Reverse

Name: yvrE [H]

Synonym: BMA10247_A1810

Alternate gene names: 126446978

Gene position: 1744731-1743796 (Counterclockwise)

Preceding gene: 126445645

Following gene: 126446967

Centisome position: 74.16

GC content: 72.97

Gene sequence:

>936_bases
ATGGAATCATCGAATCGACCGGCGCGAACGCACGAGGCATCCGCCGCGACGCTGCTGGTCGACTGCCGCAACGCGCTCGG
CGAAGGCGCGACGTGGTGCGACGCCGCGCACGCGCTGTACTGGGTCGACATCGAAGGCGCGCGCCTGTGGCGATGGCGCG
CGGCGGGCGCGCACGGCGGCGAGCGCTGCGACAGCTGGGAGATGCCCGAGCGCATCGCGTGCTTCGCGCTCACCGGCGAT
CCGGACGTGCTGCTCGTCGGCCTCGCGTTGCGTCTCGCGTTCTTCGATACGCGCCGGCGGGCGCTCACGCCGATCGTCGA
TGTCGAGCCCGATCGGCCGACACGGCTGAACGACGGCCGCTGCGACCGCGCGGGCGCGTTCGTGTTCGGGACGAAGGACG
AGAGCGGCGGCGCGTCGCCGCGGGCGATCGGCGGCTATTACCGGCTGAACGCGGACTTGAGCCTGCAGCGGCTCGCGCTA
CCGCCCGCGGCGATCGCGAACGGCATCGCGTTTTCGCCGGACGGCTCGGCGATGTATTTCTGCGATTCGCCGACGCGGGA
AATCCAGGTGTGCGACTACCGGCCGGGCGGCGATGTCGATCGCGTCCGGTCGTTCGTGCGGCTGGCCGATGCGCATGGCG
AGCCGGACGGCTCCACGGTCGACGCGAGCGGCGGCGTATGGAATGCGCAGTGGGGCGGCGCGCGGGTGGTGCGCTACGAC
GCGCAAGGCGTCGAGACCGACCGCATCGCGGTGCCGACGCCGCAGCCGAGCTGCGTGACGCTCGATGCCGCCGGGCGGCT
GTACGTGACGAGCGCGCGCGTCGGTCTCGACGACGGCGCGCTCGCGGGCAACCCGGGCGCGGGCGGCGTGTTTGTCGCGC
ACACGCGCCATTCGGGGAGCGCGACGCCGCGCTTCGCGCTCGCGCGCCACGCATGA

Upstream 100 bases:

>100_bases
CGGAGCAGCCGGGCGAGCGCATGCCGCGGGCGTCGCTTCGCGCGCCCGCGATGCTCGCGGCCCTCCGGCTCGCCGCATCA
CCGGGAAATCAGGAGACAGC

Downstream 100 bases:

>100_bases
ACGCGTTGTGCGAACGCCGGCGTGAAGCGACGGCGTTTCAGCGACGGTGGGCCGTGCGCAGGACGTTGGCAGGGCATCGG
CAAGACGTCGGCAGGGCGTC

Product: senescence marker protein-30 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MESSNRPARTHEASAATLLVDCRNALGEGATWCDAAHALYWVDIEGARLWRWRAAGAHGGERCDSWEMPERIACFALTGD
PDVLLVGLALRLAFFDTRRRALTPIVDVEPDRPTRLNDGRCDRAGAFVFGTKDESGGASPRAIGGYYRLNADLSLQRLAL
PPAAIANGIAFSPDGSAMYFCDSPTREIQVCDYRPGGDVDRVRSFVRLADAHGEPDGSTVDASGGVWNAQWGGARVVRYD
AQGVETDRIAVPTPQPSCVTLDAAGRLYVTSARVGLDDGALAGNPGAGGVFVAHTRHSGSATPRFALARHA

Sequences:

>Translated_311_residues
MESSNRPARTHEASAATLLVDCRNALGEGATWCDAAHALYWVDIEGARLWRWRAAGAHGGERCDSWEMPERIACFALTGD
PDVLLVGLALRLAFFDTRRRALTPIVDVEPDRPTRLNDGRCDRAGAFVFGTKDESGGASPRAIGGYYRLNADLSLQRLAL
PPAAIANGIAFSPDGSAMYFCDSPTREIQVCDYRPGGDVDRVRSFVRLADAHGEPDGSTVDASGGVWNAQWGGARVVRYD
AQGVETDRIAVPTPQPSCVTLDAAGRLYVTSARVGLDDGALAGNPGAGGVFVAHTRHSGSATPRFALARHA
>Mature_311_residues
MESSNRPARTHEASAATLLVDCRNALGEGATWCDAAHALYWVDIEGARLWRWRAAGAHGGERCDSWEMPERIACFALTGD
PDVLLVGLALRLAFFDTRRRALTPIVDVEPDRPTRLNDGRCDRAGAFVFGTKDESGGASPRAIGGYYRLNADLSLQRLAL
PPAAIANGIAFSPDGSAMYFCDSPTREIQVCDYRPGGDVDRVRSFVRLADAHGEPDGSTVDASGGVWNAQWGGARVVRYD
AQGVETDRIAVPTPQPSCVTLDAAGRLYVTSARVGLDDGALAGNPGAGGVFVAHTRHSGSATPRFALARHA

Specific function: Unknown

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SMP-30/CGR1 family [H]

Homologues:

Organism=Homo sapiens, GI23111021, Length=278, Percent_Identity=26.6187050359712, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI4759036, Length=278, Percent_Identity=26.6187050359712, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24646912, Length=273, Percent_Identity=27.4725274725275, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24646910, Length=273, Percent_Identity=27.4725274725275, Blast_Score=75, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR013658
- InterPro:   IPR005511 [H]

Pfam domain/function: PF08450 SGL [H]

EC number: NA

Molecular weight: Translated: 33150; Mature: 33150

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESSNRPARTHEASAATLLVDCRNALGEGATWCDAAHALYWVDIEGARLWRWRAAGAHGG
CCCCCCCCCCCCCCCEEEEEEHHHHHCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCC
ERCDSWEMPERIACFALTGDPDVLLVGLALRLAFFDTRRRALTPIVDVEPDRPTRLNDGR
CCCCCCCCCCEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCC
CDRAGAFVFGTKDESGGASPRAIGGYYRLNADLSLQRLALPPAAIANGIAFSPDGSAMYF
CCCCCEEEEECCCCCCCCCCCEECCEEEEECCCEEEEECCCHHHHHCCEEECCCCCEEEE
CDSPTREIQVCDYRPGGDVDRVRSFVRLADAHGEPDGSTVDASGGVWNAQWGGARVVRYD
ECCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCEEECCCCCEEEEEEE
AQGVETDRIAVPTPQPSCVTLDAAGRLYVTSARVGLDDGALAGNPGAGGVFVAHTRHSGS
CCCCCCCEEECCCCCCCEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCC
ATPRFALARHA
CCCCEEEECCC
>Mature Secondary Structure
MESSNRPARTHEASAATLLVDCRNALGEGATWCDAAHALYWVDIEGARLWRWRAAGAHGG
CCCCCCCCCCCCCCCEEEEEEHHHHHCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCC
ERCDSWEMPERIACFALTGDPDVLLVGLALRLAFFDTRRRALTPIVDVEPDRPTRLNDGR
CCCCCCCCCCEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCC
CDRAGAFVFGTKDESGGASPRAIGGYYRLNADLSLQRLALPPAAIANGIAFSPDGSAMYF
CCCCCEEEEECCCCCCCCCCCEECCEEEEECCCEEEEECCCHHHHHCCEEECCCCCEEEE
CDSPTREIQVCDYRPGGDVDRVRSFVRLADAHGEPDGSTVDASGGVWNAQWGGARVVRYD
ECCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCEEECCCCCEEEEEEE
AQGVETDRIAVPTPQPSCVTLDAAGRLYVTSARVGLDDGALAGNPGAGGVFVAHTRHSGS
CCCCCCCEEECCCCCCCEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCC
ATPRFALARHA
CCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]