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The map label for this gene is soxA [H]

Identifier: 126446721

GI number: 126446721

Start: 1472862

End: 1474265

Strand: Reverse

Name: soxA [H]

Synonym: BMA10247_A1520

Alternate gene names: 126446721

Gene position: 1474265-1472862 (Counterclockwise)

Preceding gene: 126447263

Following gene: 126446402

Centisome position: 62.66

GC content: 70.09

Gene sequence:

>1404_bases
ATGACCCGACAGATCCGTTTCAACGCCTTCGACATGAACTGCGTCGGCCATCAATCGCCCGGGCTCTGGGCGCATCCGCG
CGACGAGTCGTGGCGCTATCGCGAGCTGAGCTACTGGACCGGGCTCGCGCGACTGCTCGAGCGCGGCAAGTTCGACGGCC
TGTTCATCGCCGACGTGCTCGGCATCTACGACGTCTACCAGGGCAGCGGCGAAGCGGCGATCCGGCAGGGCGCGCAGGTG
CCCGTCAACGATCCGATCCTGCTCGTGTCCGCGATGGCGGCCGCGACGCGGCATCTCGGCTTCGGCATCACGTGCTCGCT
GTCGTATGAGCATCCCTATCCGTTCGCGCGGCGCATGTCGACGCTCGATCATCTGACGGGCGGGCGCGTCGGCTGGAACG
TCGTCACGTCGTATCTCGACAGCGCCGCGCGCAACCTCGGGCTGCCGCGGCAGGCGAATCACGACGAGCGCTACGCGATC
GCCGACGAGTATCTCGAGGTTTGCTACAAGCTGTGGGAAGGTTCGTGGGAGGACGGCGCGGTCGTGCGCGACGCCGCGCG
CCGCGTGTTCGCCGAGCCGTCGAAGGTGCATCCGATCGACCATCGCGGCCGCTATTACGACGTGCCGGGCATCCATCTGT
GCGAGCCTTCGCCGCAGCGCACGCCGGTGCTCTATCAGGCGGGCGCGTCCAGGCGCGGCAAGGACTTCGCCGCGCAGCAC
GCGGAGTGCATCTTCGTCGCCGCGCCGTCGCGCACGATCCTCAAGGCGTTCGTCGCCGACATCCGCGCGCGCGTGAAGCG
GTTCGGCCGCGATCCGCGCGACGTGCTGATCTTCAACCTGCACACGGTGATCACGGGCCGCACGTCGGCCGACGCGCACG
CGAAGCACGCCGACTATCGCCGCTACGCGAGCGACGAGGGCGCACTCGCGCTGATGTCCGGCTGGACCGGCATCGATCTG
TCGAAATACGCGCTTGACGAGCCCCTCGAGCACGTCGAGAGCAACGCGATCCAGTCGGCCGTCGAGGCGCTGTCGAGCGC
CGATCCGACGCGCAAGTGGACGGTGCGCGAGATCGCGCGCTGGGGCGGCATCGGCGGGCTCGGGCCGGTGTCGGTCGGCG
ACGCGCGCGAGATCGCCGACGATCTGCAATCGTGGGTCGACGAGACCGACGTGGACGGCTTCAACCTCGCATACGCGGTG
ACGCCGGAGACGTTCGTCGATGTCGTCGAGCTCGTCGTGCCCGAGCTGCAGCGGCGCGGCGCCTATCAGACCGACTACGC
GCCGGGCACGCTGCGCGAGAAGCTGCATCGCGCGGGGCCGCGGCTCGCCGCGCCGCATCCGGCCGCGCGCTACCGCGTGG
GCGGCGAGCCCGCGGCGGCCGGGCGGCTCGCGGCGCAGCAGTGA

Upstream 100 bases:

>100_bases
CGGCGCGCTATAACGCCGCGCCGCATCGCCGCGCCGCCGCGCGCGTCCGCACGCATCGACCGTATCGACCGTATCGACCG
TATCGAGAGAACGCTTCACC

Downstream 100 bases:

>100_bases
CGGCGGCGAGGCGGGGCGCGCGCCCGGTCGGCGGCGTGCCGCCGCCGACGCACGTGCGCGCGAGGGCGGGCGTCGCGTCG
GGGCGTGATGGCCGCCGGCG

Product: monoxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MTRQIRFNAFDMNCVGHQSPGLWAHPRDESWRYRELSYWTGLARLLERGKFDGLFIADVLGIYDVYQGSGEAAIRQGAQV
PVNDPILLVSAMAAATRHLGFGITCSLSYEHPYPFARRMSTLDHLTGGRVGWNVVTSYLDSAARNLGLPRQANHDERYAI
ADEYLEVCYKLWEGSWEDGAVVRDAARRVFAEPSKVHPIDHRGRYYDVPGIHLCEPSPQRTPVLYQAGASRRGKDFAAQH
AECIFVAAPSRTILKAFVADIRARVKRFGRDPRDVLIFNLHTVITGRTSADAHAKHADYRRYASDEGALALMSGWTGIDL
SKYALDEPLEHVESNAIQSAVEALSSADPTRKWTVREIARWGGIGGLGPVSVGDAREIADDLQSWVDETDVDGFNLAYAV
TPETFVDVVELVVPELQRRGAYQTDYAPGTLREKLHRAGPRLAAPHPAARYRVGGEPAAAGRLAAQQ

Sequences:

>Translated_467_residues
MTRQIRFNAFDMNCVGHQSPGLWAHPRDESWRYRELSYWTGLARLLERGKFDGLFIADVLGIYDVYQGSGEAAIRQGAQV
PVNDPILLVSAMAAATRHLGFGITCSLSYEHPYPFARRMSTLDHLTGGRVGWNVVTSYLDSAARNLGLPRQANHDERYAI
ADEYLEVCYKLWEGSWEDGAVVRDAARRVFAEPSKVHPIDHRGRYYDVPGIHLCEPSPQRTPVLYQAGASRRGKDFAAQH
AECIFVAAPSRTILKAFVADIRARVKRFGRDPRDVLIFNLHTVITGRTSADAHAKHADYRRYASDEGALALMSGWTGIDL
SKYALDEPLEHVESNAIQSAVEALSSADPTRKWTVREIARWGGIGGLGPVSVGDAREIADDLQSWVDETDVDGFNLAYAV
TPETFVDVVELVVPELQRRGAYQTDYAPGTLREKLHRAGPRLAAPHPAARYRVGGEPAAAGRLAAQQ
>Mature_466_residues
TRQIRFNAFDMNCVGHQSPGLWAHPRDESWRYRELSYWTGLARLLERGKFDGLFIADVLGIYDVYQGSGEAAIRQGAQVP
VNDPILLVSAMAAATRHLGFGITCSLSYEHPYPFARRMSTLDHLTGGRVGWNVVTSYLDSAARNLGLPRQANHDERYAIA
DEYLEVCYKLWEGSWEDGAVVRDAARRVFAEPSKVHPIDHRGRYYDVPGIHLCEPSPQRTPVLYQAGASRRGKDFAAQHA
ECIFVAAPSRTILKAFVADIRARVKRFGRDPRDVLIFNLHTVITGRTSADAHAKHADYRRYASDEGALALMSGWTGIDLS
KYALDEPLEHVESNAIQSAVEALSSADPTRKWTVREIARWGGIGGLGPVSVGDAREIADDLQSWVDETDVDGFNLAYAVT
PETFVDVVELVVPELQRRGAYQTDYAPGTLREKLHRAGPRLAAPHPAARYRVGGEPAAAGRLAAQQ

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. This enzyme metabolizes DBT-sulfone (DBTO2 or DBT 5,5-dioxide) to 2- hydroxybiphenyl (2-HBP) [H]

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR016215 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 51750; Mature: 51618

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRQIRFNAFDMNCVGHQSPGLWAHPRDESWRYRELSYWTGLARLLERGKFDGLFIADVL
CCCEEEECEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH
GIYDVYQGSGEAAIRQGAQVPVNDPILLVSAMAAATRHLGFGITCSLSYEHPYPFARRMS
HHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHH
TLDHLTGGRVGWNVVTSYLDSAARNLGLPRQANHDERYAIADEYLEVCYKLWEGSWEDGA
HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCH
VVRDAARRVFAEPSKVHPIDHRGRYYDVPGIHLCEPSPQRTPVLYQAGASRRGKDFAAQH
HHHHHHHHHHCCCCCCCCCCCCCCEECCCCEEECCCCCCCCCEEEECCCCCCCCHHHHCC
AECIFVAAPSRTILKAFVADIRARVKRFGRDPRDVLIFNLHTVITGRTSADAHAKHADYR
CCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHH
RYASDEGALALMSGWTGIDLSKYALDEPLEHVESNAIQSAVEALSSADPTRKWTVREIAR
HHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
WGGIGGLGPVSVGDAREIADDLQSWVDETDVDGFNLAYAVTPETFVDVVELVVPELQRRG
HCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCC
AYQTDYAPGTLREKLHRAGPRLAAPHPAARYRVGGEPAAAGRLAAQQ
CCCCCCCCHHHHHHHHHCCCCCCCCCCHHHEECCCCCCHHCCCCCCC
>Mature Secondary Structure 
TRQIRFNAFDMNCVGHQSPGLWAHPRDESWRYRELSYWTGLARLLERGKFDGLFIADVL
CCEEEECEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH
GIYDVYQGSGEAAIRQGAQVPVNDPILLVSAMAAATRHLGFGITCSLSYEHPYPFARRMS
HHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHH
TLDHLTGGRVGWNVVTSYLDSAARNLGLPRQANHDERYAIADEYLEVCYKLWEGSWEDGA
HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCH
VVRDAARRVFAEPSKVHPIDHRGRYYDVPGIHLCEPSPQRTPVLYQAGASRRGKDFAAQH
HHHHHHHHHHCCCCCCCCCCCCCCEECCCCEEECCCCCCCCCEEEECCCCCCCCHHHHCC
AECIFVAAPSRTILKAFVADIRARVKRFGRDPRDVLIFNLHTVITGRTSADAHAKHADYR
CCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHH
RYASDEGALALMSGWTGIDLSKYALDEPLEHVESNAIQSAVEALSSADPTRKWTVREIAR
HHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
WGGIGGLGPVSVGDAREIADDLQSWVDETDVDGFNLAYAVTPETFVDVVELVVPELQRRG
HCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCC
AYQTDYAPGTLREKLHRAGPRLAAPHPAARYRVGGEPAAAGRLAAQQ
CCCCCCCCHHHHHHHHHCCCCCCCCCCHHHEECCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]