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The map label for this gene is 126446650

Identifier: 126446650

GI number: 126446650

Start: 178159

End: 178644

Strand: Reverse

Name: 126446650

Synonym: BMA10247_A0209

Alternate gene names: NA

Gene position: 178644-178159 (Counterclockwise)

Preceding gene: 126447191

Following gene: 126446864

Centisome position: 7.59

GC content: 73.05

Gene sequence:

>486_bases
ATGATCACGTCCCACCATCTTCAGCAAGCGTCCCGCCTGCGCGGCCAGGTCACCGCGCTCAACCGGCGCCTGCGCCGGGA
GGCGCAGGCCGATCCCGTGCAGTTCTCGCAACTGGTCGTCCTCGGCGCGATCGATCGGCTCGGCGGTGACGTCACGCCGT
CGGCGCTCGCATCGGCCGAGCGGATGCGCTCGTCGAATCTCGCCGCGCTGCTGCGCGAGCTCGAAGGCGGCGGGCTGATC
CAGCGCCACGCGGATCCGGCCGACGGCCGCAAGAGCCGCGTGTCGCTGACCGCGAGCGGCAAGCGGATGCTGTACGGCAA
CCGCGCGAAGCGCGAGGAATGGCTCGTGCGCGCGATGCACGCCTGCCTCACCGCCGGCGAACGCGAGCTGCTCGCCGCCG
CCGGCCCGCTGCTCGAGCGCCTCGCGCAATTCGACGAAGCGGCGGGCGCCGCGTCGCCCGCCCCCTCACCCAGGAGCTCA
CGATGA

Upstream 100 bases:

>100_bases
CGCCGCGTCGCCCTCCCCCGCATCCGGCGCCGCCGCACCCGCGCTCACGCCGACCCCACTCATATTGCTATAAAAATATA
GCTATATTAAAGTAAGCACC

Downstream 100 bases:

>100_bases
ACACCGCATTGATCGGCCTCGACTACATCGTCGACATCATGCATCCCACCGGCAAGATCGCCCGCAGCGCCGCGCATGCC
GCGCAGCGCGACGTGGTCGG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MITSHHLQQASRLRGQVTALNRRLRREAQADPVQFSQLVVLGAIDRLGGDVTPSALASAERMRSSNLAALLRELEGGGLI
QRHADPADGRKSRVSLTASGKRMLYGNRAKREEWLVRAMHACLTAGERELLAAAGPLLERLAQFDEAAGAASPAPSPRSS
R

Sequences:

>Translated_161_residues
MITSHHLQQASRLRGQVTALNRRLRREAQADPVQFSQLVVLGAIDRLGGDVTPSALASAERMRSSNLAALLRELEGGGLI
QRHADPADGRKSRVSLTASGKRMLYGNRAKREEWLVRAMHACLTAGERELLAAAGPLLERLAQFDEAAGAASPAPSPRSS
R
>Mature_161_residues
MITSHHLQQASRLRGQVTALNRRLRREAQADPVQFSQLVVLGAIDRLGGDVTPSALASAERMRSSNLAALLRELEGGGLI
QRHADPADGRKSRVSLTASGKRMLYGNRAKREEWLVRAMHACLTAGERELLAAAGPLLERLAQFDEAAGAASPAPSPRSS
R

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17369; Mature: 17369

Theoretical pI: Translated: 11.62; Mature: 11.62

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITSHHLQQASRLRGQVTALNRRLRREAQADPVQFSQLVVLGAIDRLGGDVTPSALASAE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
RMRSSNLAALLRELEGGGLIQRHADPADGRKSRVSLTASGKRMLYGNRAKREEWLVRAMH
HHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCEEEEECCCCEEECCCHHHHHHHHHHHHH
ACLTAGERELLAAAGPLLERLAQFDEAAGAASPAPSPRSSR
HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MITSHHLQQASRLRGQVTALNRRLRREAQADPVQFSQLVVLGAIDRLGGDVTPSALASAE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
RMRSSNLAALLRELEGGGLIQRHADPADGRKSRVSLTASGKRMLYGNRAKREEWLVRAMH
HHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCEEEEECCCCEEECCCHHHHHHHHHHHHH
ACLTAGERELLAAAGPLLERLAQFDEAAGAASPAPSPRSSR
HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]