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The map label for this gene is yecD [H]

Identifier: 126446864

GI number: 126446864

Start: 177590

End: 178162

Strand: Reverse

Name: yecD [H]

Synonym: BMA10247_A0208

Alternate gene names: 126446864

Gene position: 178162-177590 (Counterclockwise)

Preceding gene: 126446650

Following gene: 126447470

Centisome position: 7.57

GC content: 69.81

Gene sequence:

>573_bases
ATGAACACCGCATTGATCGGCCTCGACTACATCGTCGACATCATGCATCCCACCGGCAAGATCGCCCGCAGCGCCGCGCA
TGCCGCGCAGCGCGACGTGGTCGGCCGCTTCAACCGCGCGCTCGCGGCCGCGAAGCAGAAGGACTGGCTGCGGATCGGCG
TCAAGGTCGGCTTCGAGCCGGGCTATGCGGACTTGCCCGCGCATTCGCCGATGTTCGGCCGCGCGCAGGCATTCGGCGCG
CTCGATCTGAGCGGCGCCGGCACCGCGTTCCACCCGGATCTCGACGCCGCCGCCTTCCAGCTCGTGGTCGTCAAGCCGCG
CGTGAGCGCGTTCTATGCGACGCGTCTCGAAGCCGCGCTGCGTGCGCGTCGGATCGAACGCGTGATCGTCGCGGGCGTCA
GCACGGCGTGGGCCGTGCAGGCAGCGGCCCGCGACGCGCACGATCGTGACTACGAAGTGCTCGTGCTCGAGGACGCGTGC
GCGGCCGCGACGGAAGACGAGCATCAACGCTCGATCCACACGCTGCGCGGCATCGCGCGGATCGTCACGCTCGACGATCT
CGCGGCGCTGTGA

Upstream 100 bases:

>100_bases
GCGAGCTGCTCGCCGCCGCCGGCCCGCTGCTCGAGCGCCTCGCGCAATTCGACGAAGCGGCGGGCGCCGCGTCGCCCGCC
CCCTCACCCAGGAGCTCACG

Downstream 100 bases:

>100_bases
ACGCGGCCCGCGCGAGGCCCGCATGATCCGCGCGGCCCGCAGCGCACTCGCCGCCCGCGCCGGCCGCGCATTCGATCTGC
CGACGCTCGGCCGCACGCTC

Product: isochorismatase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MNTALIGLDYIVDIMHPTGKIARSAAHAAQRDVVGRFNRALAAAKQKDWLRIGVKVGFEPGYADLPAHSPMFGRAQAFGA
LDLSGAGTAFHPDLDAAAFQLVVVKPRVSAFYATRLEAALRARRIERVIVAGVSTAWAVQAAARDAHDRDYEVLVLEDAC
AAATEDEHQRSIHTLRGIARIVTLDDLAAL

Sequences:

>Translated_190_residues
MNTALIGLDYIVDIMHPTGKIARSAAHAAQRDVVGRFNRALAAAKQKDWLRIGVKVGFEPGYADLPAHSPMFGRAQAFGA
LDLSGAGTAFHPDLDAAAFQLVVVKPRVSAFYATRLEAALRARRIERVIVAGVSTAWAVQAAARDAHDRDYEVLVLEDAC
AAATEDEHQRSIHTLRGIARIVTLDDLAAL
>Mature_190_residues
MNTALIGLDYIVDIMHPTGKIARSAAHAAQRDVVGRFNRALAAAKQKDWLRIGVKVGFEPGYADLPAHSPMFGRAQAFGA
LDLSGAGTAFHPDLDAAAFQLVVVKPRVSAFYATRLEAALRARRIERVIVAGVSTAWAVQAAARDAHDRDYEVLVLEDAC
AAATEDEHQRSIHTLRGIARIVTLDDLAAL

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

Organism=Escherichia coli, GI87081992, Length=99, Percent_Identity=35.3535353535354, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 20466; Mature: 20466

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTALIGLDYIVDIMHPTGKIARSAAHAAQRDVVGRFNRALAAAKQKDWLRIGVKVGFEP
CCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
GYADLPAHSPMFGRAQAFGALDLSGAGTAFHPDLDAAAFQLVVVKPRVSAFYATRLEAAL
CCCCCCCCCCCCCCHHHCCCEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHH
RARRIERVIVAGVSTAWAVQAAARDAHDRDYEVLVLEDACAAATEDEHQRSIHTLRGIAR
HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEECCHHHCCCHHHHHHHHHHHHHHH
IVTLDDLAAL
HHHHHHHHCC
>Mature Secondary Structure
MNTALIGLDYIVDIMHPTGKIARSAAHAAQRDVVGRFNRALAAAKQKDWLRIGVKVGFEP
CCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
GYADLPAHSPMFGRAQAFGALDLSGAGTAFHPDLDAAAFQLVVVKPRVSAFYATRLEAAL
CCCCCCCCCCCCCCHHHCCCEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHH
RARRIERVIVAGVSTAWAVQAAARDAHDRDYEVLVLEDACAAATEDEHQRSIHTLRGIAR
HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEECCHHHCCCHHHHHHHHHHHHHHH
IVTLDDLAAL
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]