| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126446586
Identifier: 126446586
GI number: 126446586
Start: 1590570
End: 1591475
Strand: Direct
Name: 126446586
Synonym: BMA10247_A1652
Alternate gene names: NA
Gene position: 1590570-1591475 (Clockwise)
Preceding gene: 126447101
Following gene: 126446643
Centisome position: 67.61
GC content: 74.28
Gene sequence:
>906_bases ATGCCGGCGTCGTCCGGCCCGCTTCGCATGCTTCGTTCCGCTTCCGCCGCCGCTGCCGCGGCATTCGTCGCGCTCTGGTC GACGGGCTTCATCGTCGCGCGCGCGATCAAGCCATATGCCGACCCGAACCTGTATCTGCTCGCGCGCTTCTGCGGCACCG CGCTGCTCTACGCGGGCATCGCGCTCGCCGCGCGCGCGCCGTGGCCCGCGCCGCGCGAATGGGGCCGTCACCTGCTCGCG GGCGCGCTGCTGCAAGGCTTCTATCTGAGCGCGAGCTACTGGGCCGTCGCGCACGGGCTCAGCGCCGGCGTGATGGCATT GCTCGGCGCGCTACAGCCGCTCGCGACCGCCGCGCTCGCCGCGCCGCTCTTCGGCGAGCGGCTCGCCGCGCGCGGCTGGT TCGGCATGGCGCTCGGCATCGCGGGCGTCGCACTCGTGCTCGCGCCGAAGCTCGGCGACGCGCCGGCGGCGGCGGGCGGC GCGCCCGCGTGGGCCGTGGTCGCGATCGCGATCGCCGCGGTCGGCTCGATCACGGCCGGCTCGCTCTACCAGAAAACCTC GCTCGCGAAAGCGGATTTGCGCATCGCGGTCGCGCTGCAGAATCTCGGCGCGGCGCTGGTGGCGGGCGCGGCGGCCGTCG CGCTCGGCGAAACCCGCTGGCACGGCGCACCGGCGCTGTGGTTCTCGCTCGCGTGGGGAATCGGGATGCTGTCCGGCGTC GCGGTAATGCTGCTGATGGCGATGCTGCGCCGGGGTGAAGCCGCGCGCGCGACGTCGCTGCTGTTCCTCGCGCCGCCCCT CGCCGCATTGCAGGGCTACGCGCTGTTCGGCGAAACGCTCGTGCCGCTGCAGCTCGCGGGCTTCGCGCTCGCGCTAGCGG GCGTCACGCTCGCGCGCCGCAACTGA
Upstream 100 bases:
>100_bases TTCTCGCTCGACTGACCCGCGATCGGCGCAGGCCGCGCGCAGTGCAGGTTTCGACAAGACGGCGGCGCGCCGGCGCGCGA TACTCGGCCGCTTCGTCGTC
Downstream 100 bases:
>100_bases CGCGGCCGCGGCCGAAGCGGCCGAGGCAACCGCAGCAGACGGCCGCGAACGACGCGCATGATCGCCGCCGCAATCGATTA CAGGGCACGGGGCGCGAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MPASSGPLRMLRSASAAAAAAFVALWSTGFIVARAIKPYADPNLYLLARFCGTALLYAGIALAARAPWPAPREWGRHLLA GALLQGFYLSASYWAVAHGLSAGVMALLGALQPLATAALAAPLFGERLAARGWFGMALGIAGVALVLAPKLGDAPAAAGG APAWAVVAIAIAAVGSITAGSLYQKTSLAKADLRIAVALQNLGAALVAGAAAVALGETRWHGAPALWFSLAWGIGMLSGV AVMLLMAMLRRGEAARATSLLFLAPPLAALQGYALFGETLVPLQLAGFALALAGVTLARRN
Sequences:
>Translated_301_residues MPASSGPLRMLRSASAAAAAAFVALWSTGFIVARAIKPYADPNLYLLARFCGTALLYAGIALAARAPWPAPREWGRHLLA GALLQGFYLSASYWAVAHGLSAGVMALLGALQPLATAALAAPLFGERLAARGWFGMALGIAGVALVLAPKLGDAPAAAGG APAWAVVAIAIAAVGSITAGSLYQKTSLAKADLRIAVALQNLGAALVAGAAAVALGETRWHGAPALWFSLAWGIGMLSGV AVMLLMAMLRRGEAARATSLLFLAPPLAALQGYALFGETLVPLQLAGFALALAGVTLARRN >Mature_300_residues PASSGPLRMLRSASAAAAAAFVALWSTGFIVARAIKPYADPNLYLLARFCGTALLYAGIALAARAPWPAPREWGRHLLAG ALLQGFYLSASYWAVAHGLSAGVMALLGALQPLATAALAAPLFGERLAARGWFGMALGIAGVALVLAPKLGDAPAAAGGA PAWAVVAIAIAAVGSITAGSLYQKTSLAKADLRIAVALQNLGAALVAGAAAVALGETRWHGAPALWFSLAWGIGMLSGVA VMLLMAMLRRGEAARATSLLFLAPPLAALQGYALFGETLVPLQLAGFALALAGVTLARRN
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30485; Mature: 30354
Theoretical pI: Translated: 11.18; Mature: 11.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPASSGPLRMLRSASAAAAAAFVALWSTGFIVARAIKPYADPNLYLLARFCGTALLYAGI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH ALAARAPWPAPREWGRHLLAGALLQGFYLSASYWAVAHGLSAGVMALLGALQPLATAALA HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH APLFGERLAARGWFGMALGIAGVALVLAPKLGDAPAAAGGAPAWAVVAIAIAAVGSITAG HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHH SLYQKTSLAKADLRIAVALQNLGAALVAGAAAVALGETRWHGAPALWFSLAWGIGMLSGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH AVMLLMAMLRRGEAARATSLLFLAPPLAALQGYALFGETLVPLQLAGFALALAGVTLARR HHHHHHHHHHCCCHHHHHEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC N C >Mature Secondary Structure PASSGPLRMLRSASAAAAAAFVALWSTGFIVARAIKPYADPNLYLLARFCGTALLYAGI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH ALAARAPWPAPREWGRHLLAGALLQGFYLSASYWAVAHGLSAGVMALLGALQPLATAALA HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH APLFGERLAARGWFGMALGIAGVALVLAPKLGDAPAAAGGAPAWAVVAIAIAAVGSITAG HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHH SLYQKTSLAKADLRIAVALQNLGAALVAGAAAVALGETRWHGAPALWFSLAWGIGMLSGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH AVMLLMAMLRRGEAARATSLLFLAPPLAALQGYALFGETLVPLQLAGFALALAGVTLARR HHHHHHHHHHCCCHHHHHEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC N C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA