| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is nadE
Identifier: 126446643
GI number: 126446643
Start: 1591934
End: 1592788
Strand: Direct
Name: nadE
Synonym: BMA10247_A1653
Alternate gene names: 126446643
Gene position: 1591934-1592788 (Clockwise)
Preceding gene: 126446586
Following gene: 126447086
Centisome position: 67.66
GC content: 70.06
Gene sequence:
>855_bases ATGTCCCGTCCCGATCAGGCCGCCCGCCGGCGTGCGATCGCCGCCGAACTGCACGTGTCGCCCACGTTCGATGCGCGCGA CGAAGCCGAGCGCCGCATCGGGTTCGTCGCCGATTATCTGCGCACGGCCGGATTGCGGGCCTGCGTGCTGGGCATCAGCG GCGGCATCGATTCGTCGACGGCGGGCCGGCTCGCGCAACTGGCCGTCGAGCGGCTGCGCGCATCGGGCTACGACGCGCGC TTCGTCGCGATGCGGCTGCCGTACGGCGCGCAGCACGACGAAGCGGACGCGCGGCGCGCGCTCGCCTTCGTGCGCGCGGA CGAGACGCTCACGGTCGACGTGAAGCCGGCCGCCGATGCGATGCTCGCCGCGCTCGCGGCGGGCGGCCTGGCGTATCTCG ACCACGCACAGCAGGATTTCGTGCTCGGCAACATCAAGGCGCGCGAGCGGATGATCGCGCAATACGCGGTGGCGGGCGCG CGGAACGGCGTCGTGATCGGCACCGATCATGCGGCGGAATCGGTGATGGGCTTCTTCACGAAGTTCGGCGACGGCGGCGC GGACGTGCTGCCGCTCGCGGGCCTCACGAAACGCCGCGTGCGCGCACTCGCGCGCATGCTGGGCGCCGACGAGCCGCTTG TGCTGAAAACGCCGACCGCCGATCTCGAAACGTTGCGTCCGCAACGGCCCGACGAGCACGCGTACGGCATCACGTACGAG CAGATCGACGATTTTCTCGAAGGCAAGCCGATGGACGACGCGGTCGCCGAGACGGTGCTGCGCTTCTATGACGCGACACA CCACAAGCGCGCGCTGCCCTATACGATGTTCGACTGGCCGGGCCACCCGGCATGA
Upstream 100 bases:
>100_bases CGACACCCGACGACCGGATCGACAGCCGAATCCGCCGCCGGCAAGCCCGCGCGAATCCGCCTATGATCGGTTCTTCGATT CCGCCGCGAAGGAGCACGCG
Downstream 100 bases:
>100_bases GCGAGGAGGAAGACGAAGCCCGCGGCGGCTCGGCGCCGCCGGTTCGGCGGTCGTTTCCGCCGCCGCGCCGCTGCGGTCCA CGATCGCGCACGCGCGCCGC
Product: NAD synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MSRPDQAARRRAIAAELHVSPTFDARDEAERRIGFVADYLRTAGLRACVLGISGGIDSSTAGRLAQLAVERLRASGYDAR FVAMRLPYGAQHDEADARRALAFVRADETLTVDVKPAADAMLAALAAGGLAYLDHAQQDFVLGNIKARERMIAQYAVAGA RNGVVIGTDHAAESVMGFFTKFGDGGADVLPLAGLTKRRVRALARMLGADEPLVLKTPTADLETLRPQRPDEHAYGITYE QIDDFLEGKPMDDAVAETVLRFYDATHHKRALPYTMFDWPGHPA
Sequences:
>Translated_284_residues MSRPDQAARRRAIAAELHVSPTFDARDEAERRIGFVADYLRTAGLRACVLGISGGIDSSTAGRLAQLAVERLRASGYDAR FVAMRLPYGAQHDEADARRALAFVRADETLTVDVKPAADAMLAALAAGGLAYLDHAQQDFVLGNIKARERMIAQYAVAGA RNGVVIGTDHAAESVMGFFTKFGDGGADVLPLAGLTKRRVRALARMLGADEPLVLKTPTADLETLRPQRPDEHAYGITYE QIDDFLEGKPMDDAVAETVLRFYDATHHKRALPYTMFDWPGHPA >Mature_283_residues SRPDQAARRRAIAAELHVSPTFDARDEAERRIGFVADYLRTAGLRACVLGISGGIDSSTAGRLAQLAVERLRASGYDARF VAMRLPYGAQHDEADARRALAFVRADETLTVDVKPAADAMLAALAAGGLAYLDHAQQDFVLGNIKARERMIAQYAVAGAR NGVVIGTDHAAESVMGFFTKFGDGGADVLPLAGLTKRRVRALARMLGADEPLVLKTPTADLETLRPQRPDEHAYGITYEQ IDDFLEGKPMDDAVAETVLRFYDATHHKRALPYTMFDWPGHPA
Specific function: This NAD Synthase Uses Nh(3) In Preference To Glutamine. [C]
COG id: COG0171
COG function: function code H; NAD synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD synthetase family
Homologues:
Organism=Escherichia coli, GI1788036, Length=272, Percent_Identity=48.1617647058824, Blast_Score=243, Evalue=1e-65,
Paralogues:
None
Copy number: 100 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NADE_BURM7 (A3MF00)
Other databases:
- EMBL: CP000547 - RefSeq: YP_001078836.1 - ProteinModelPortal: A3MF00 - SMR: A3MF00 - GeneID: 4890081 - GenomeReviews: CP000547_GR - KEGG: bmn:BMA10247_A1653 - TIGR: BMA10247_A1653 - HOGENOM: HBG351567 - OMA: KVAQATI - ProtClustDB: PRK00768 - BioCyc: BMAL320389:BMA10247_A1653-MONOMER - HAMAP: MF_00193 - InterPro: IPR022310 - InterPro: IPR003694 - InterPro: IPR022926 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - TIGRFAMs: TIGR00552
Pfam domain/function: PF02540 NAD_synthase
EC number: =6.3.1.5
Molecular weight: Translated: 30863; Mature: 30732
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: ACT_SITE 53-53
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPDQAARRRAIAAELHVSPTFDARDEAERRIGFVADYLRTAGLRACVLGISGGIDSST CCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCHH AGRLAQLAVERLRASGYDARFVAMRLPYGAQHDEADARRALAFVRADETLTVDVKPAADA HHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHEECCCEEEEECCCHHHH MLAALAAGGLAYLDHAQQDFVLGNIKARERMIAQYAVAGARNGVVIGTDHAAESVMGFFT HHHHHHHCCHHHHHCCCCCCEECCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHH KFGDGGADVLPLAGLTKRRVRALARMLGADEPLVLKTPTADLETLRPQRPDEHAYGITYE HHCCCCCCEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHCCCCCCCCCCCCCCHH QIDDFLEGKPMDDAVAETVLRFYDATHHKRALPYTMFDWPGHPA HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCC >Mature Secondary Structure SRPDQAARRRAIAAELHVSPTFDARDEAERRIGFVADYLRTAGLRACVLGISGGIDSST CCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCHH AGRLAQLAVERLRASGYDARFVAMRLPYGAQHDEADARRALAFVRADETLTVDVKPAADA HHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHEECCCEEEEECCCHHHH MLAALAAGGLAYLDHAQQDFVLGNIKARERMIAQYAVAGARNGVVIGTDHAAESVMGFFT HHHHHHHCCHHHHHCCCCCCEECCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHH KFGDGGADVLPLAGLTKRRVRALARMLGADEPLVLKTPTADLETLRPQRPDEHAYGITYE HHCCCCCCEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHCCCCCCCCCCCCCCHH QIDDFLEGKPMDDAVAETVLRFYDATHHKRALPYTMFDWPGHPA HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA