| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126446578
Identifier: 126446578
GI number: 126446578
Start: 1880163
End: 1881092
Strand: Reverse
Name: 126446578
Synonym: BMA10247_A1958
Alternate gene names: NA
Gene position: 1881092-1880163 (Counterclockwise)
Preceding gene: 126447779
Following gene: 126447137
Centisome position: 79.95
GC content: 70.0
Gene sequence:
>930_bases ATGAACCAGGAAGTGATTGTGACATGCGCGGTGACGGGCGCGGGCGACACCGTCGGCAAGCATCCCGCGATACCCGTCAC GCCCAAGCAGATCGCCGATGCGGCGATCGAGGCCGCGAAGGCGGGCGCGACGGTCGCGCATTGCCACGTGCGCGATCCGC TCACGGGGCGCGGCAGCCGCGATCCGCGGCTGTACCGCGAGGTGGTCGACCGGATCCGCTCGGCCGACGTCGACGTCGTC ATCAATCTGACGGCCGGCATGGGCGGCGATCTCGAGATCGGTGCGGGCGAGAACCCGATGCGCTTCGGCAAGGGCACGGA CCTCGTCGGCGGGCTGACGCGGCTCGTGCATGTCGAGGAACTGCTGCCCGAGATCTGCACGCTCGATTGCGGCACGCTGA ATTTCGGCGACGGCGATTACATCTACGTGTCGACGCCCGCGCAACTGCGCGCGGGCGCGAAGCGGATCCAGGCGCTGGGC GTGAAGCCGGAGCTCGAGATCTTCGACACGGGCCACCTGTGGTTCGCGAAGCAGTTGCTGAAGGAAGGGCTTCTCGACGA TCCGCCGCTCTTCCAGCTCTGCCTCGGCATTCCGTGGGGCGCGCCCGCCGACACCGTCACGATGAAGGCGATGGTCGACA ACCTGCCTGCCGGCGCGCATTGGGCGGGCTTCGGCATCGGCCGGATGCAGATGCCGATGCTCGCGCAGGCGATGCTGCTC GGCGGCCACGTGCGCGTCGGCCTCGAGGACAACCTGTGGCTCGACCGCGGCGTGCACGCGACGAACGGCTCGCTCGTCGA GCGTGCGCGGCAGATCGTCGAGCGTCTCGGCGCGCGCGTGCTGACGCCCGCCGAGGGGCGCCGCAAGCTCGGCCTGCCGC CGCGCGGCGAGCGGCCGCTCGAGCGGCGCGCGATGACCGAATACGTATAG
Upstream 100 bases:
>100_bases GCTTATCTGGGGCTCTGAACGGTGCGGTTCGCCGCGCGCGCGCCCGGCGCCGGGCGGCGACGCGCCGAATCCGAATTCGA ATCTGAACGAGGCGACAGCG
Downstream 100 bases:
>100_bases CGCGACCGCGCCGCGCATCGACGGCCGCGCAACGTGGCGAAGGCGGCCGGGCGCGCATGCGTCGCGCCGGCGCGGCTCCT TCGTATGCCGTTCTCGTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MNQEVIVTCAVTGAGDTVGKHPAIPVTPKQIADAAIEAAKAGATVAHCHVRDPLTGRGSRDPRLYREVVDRIRSADVDVV INLTAGMGGDLEIGAGENPMRFGKGTDLVGGLTRLVHVEELLPEICTLDCGTLNFGDGDYIYVSTPAQLRAGAKRIQALG VKPELEIFDTGHLWFAKQLLKEGLLDDPPLFQLCLGIPWGAPADTVTMKAMVDNLPAGAHWAGFGIGRMQMPMLAQAMLL GGHVRVGLEDNLWLDRGVHATNGSLVERARQIVERLGARVLTPAEGRRKLGLPPRGERPLERRAMTEYV
Sequences:
>Translated_309_residues MNQEVIVTCAVTGAGDTVGKHPAIPVTPKQIADAAIEAAKAGATVAHCHVRDPLTGRGSRDPRLYREVVDRIRSADVDVV INLTAGMGGDLEIGAGENPMRFGKGTDLVGGLTRLVHVEELLPEICTLDCGTLNFGDGDYIYVSTPAQLRAGAKRIQALG VKPELEIFDTGHLWFAKQLLKEGLLDDPPLFQLCLGIPWGAPADTVTMKAMVDNLPAGAHWAGFGIGRMQMPMLAQAMLL GGHVRVGLEDNLWLDRGVHATNGSLVERARQIVERLGARVLTPAEGRRKLGLPPRGERPLERRAMTEYV >Mature_309_residues MNQEVIVTCAVTGAGDTVGKHPAIPVTPKQIADAAIEAAKAGATVAHCHVRDPLTGRGSRDPRLYREVVDRIRSADVDVV INLTAGMGGDLEIGAGENPMRFGKGTDLVGGLTRLVHVEELLPEICTLDCGTLNFGDGDYIYVSTPAQLRAGAKRIQALG VKPELEIFDTGHLWFAKQLLKEGLLDDPPLFQLCLGIPWGAPADTVTMKAMVDNLPAGAHWAGFGIGRMQMPMLAQAMLL GGHVRVGLEDNLWLDRGVHATNGSLVERARQIVERLGARVLTPAEGRRKLGLPPRGERPLERRAMTEYV
Specific function: Unknown
COG id: COG3246
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33238; Mature: 33238
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQEVIVTCAVTGAGDTVGKHPAIPVTPKQIADAAIEAAKAGATVAHCHVRDPLTGRGSR CCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCC DPRLYREVVDRIRSADVDVVINLTAGMGGDLEIGAGENPMRFGKGTDLVGGLTRLVHVEE CHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHH LLPEICTLDCGTLNFGDGDYIYVSTPAQLRAGAKRIQALGVKPELEIFDTGHLWFAKQLL HHHHHHCCCCCCEECCCCCEEEEECCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH KEGLLDDPPLFQLCLGIPWGAPADTVTMKAMVDNLPAGAHWAGFGIGRMQMPMLAQAMLL HHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH GGHVRVGLEDNLWLDRGVHATNGSLVERARQIVERLGARVLTPAEGRRKLGLPPRGERPL CCEEEECCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCH ERRAMTEYV HHHHHHHCC >Mature Secondary Structure MNQEVIVTCAVTGAGDTVGKHPAIPVTPKQIADAAIEAAKAGATVAHCHVRDPLTGRGSR CCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCC DPRLYREVVDRIRSADVDVVINLTAGMGGDLEIGAGENPMRFGKGTDLVGGLTRLVHVEE CHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHH LLPEICTLDCGTLNFGDGDYIYVSTPAQLRAGAKRIQALGVKPELEIFDTGHLWFAKQLL HHHHHHCCCCCCEECCCCCEEEEECCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH KEGLLDDPPLFQLCLGIPWGAPADTVTMKAMVDNLPAGAHWAGFGIGRMQMPMLAQAMLL HHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH GGHVRVGLEDNLWLDRGVHATNGSLVERARQIVERLGARVLTPAEGRRKLGLPPRGERPL CCEEEECCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCH ERRAMTEYV HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA