| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
Click here to switch to the map view.
The map label for this gene is 126446440
Identifier: 126446440
GI number: 126446440
Start: 265469
End: 266473
Strand: Direct
Name: 126446440
Synonym: BMA10247_A0303
Alternate gene names: NA
Gene position: 265469-266473 (Clockwise)
Preceding gene: 126446837
Following gene: 126447648
Centisome position: 11.28
GC content: 69.15
Gene sequence:
>1005_bases ATGTTCTTCGATGAGCTAAACGATGAGGAGTGGGCCCGTCTGTCGACGTTGATCGCCGATGAACCCATCCGATTGAACCG ACGAGGCCGTCCGCGGGCGGAGAATCGGGTCGTCGCGAACGCGGTGCTATGGATTCTTACCACGGGCGAGCCGTGGTCGA AGCTGCCCGGCCGCTATCCGTCCGGCCCGACGTGCCGCCGCCGCTTCGAAGAATGGCTTGCGAGCGGCACGCTCGGCGAG ATGGTGAGAGTGCTGTCGGAAGAGAGCGGTCGCGCATTCGCCTATGTGCCGCCGCCGCCCGAGTCCGTCGCGCCGGTGAG GCGCGCGGAGCCGGCCGCCGATTGCGATCGCCTGCGCGGCGTGTTTTGGCAGAACCCCGAGTCATGGCAGTTGCCCGTCG CGCAGACGGACGTTTGTCATCCGGGCGCGGGGGTGAACGTGCGCCGCTTCGCGAGCGAGGACGACGAGGACGGGGCGCAC GATGCCGACGCGCATCCTCATGGCTTCAACGTGCCGGGCGCGCCGCCCGTGCGCGATCATGCGCACGGCCGCGCGCATGC CGCGTCGTTCAGTTTCGCCACGCACGCGCCGCAGACCGAAACCTATCGCGGCTATACGGTGTACGGCATCGCGCAGCCCG TGCAGAACCTGATGTATCGCGCGTGGGCGGAGATCGTGCAGGACGATCGGCGCGTCGAGCGCTCGGGCCTCATCGGCCCG CGCTTCACCGATGCCGAATCGGCCGAGCAGTATGCGCTCGATTGGGCGCGCCAATGGATCGATCGCCGATGCGCGGGCGC GCCGAGCGTGCGCGAAACGCCGGCGCCCGTGGCCGGGCAGGCCGGCAAGTCGGTGCCGACGATCGCCGGGCTGTCCGCGC TCGCGATGGCCGAGACCAACATCAAGCACTTCGCGGCCGAGCTGCACCGCGCGCCGGCTGAAGGCCGCGGCGATGCGTCG CAAGTGCAGATCGACCGGCACGAGTACGCCTATCGCGTCGGTTGA
Upstream 100 bases:
>100_bases ACCGAATAGCGTCCCTGTGCAACCTGGCCGTGGCCGCGAGTGCGATTCGCTCGCGGCCGTGCCGCCAATCGCAGCCCGGC CTGGCTGCGTGGAGAGATCT
Downstream 100 bases:
>100_bases GCAGCGGTTCCGCGCGGCGGCGCGCTTCGGCCGCCGCGCGGCGCGCCCGGCCGCTTCGGCACGGGCGCGGGTTCAATGTC GTCCATAGTTGTCTTCGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase Protein; Transposase; IS5 Family Transposase OrfA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MFFDELNDEEWARLSTLIADEPIRLNRRGRPRAENRVVANAVLWILTTGEPWSKLPGRYPSGPTCRRRFEEWLASGTLGE MVRVLSEESGRAFAYVPPPPESVAPVRRAEPAADCDRLRGVFWQNPESWQLPVAQTDVCHPGAGVNVRRFASEDDEDGAH DADAHPHGFNVPGAPPVRDHAHGRAHAASFSFATHAPQTETYRGYTVYGIAQPVQNLMYRAWAEIVQDDRRVERSGLIGP RFTDAESAEQYALDWARQWIDRRCAGAPSVRETPAPVAGQAGKSVPTIAGLSALAMAETNIKHFAAELHRAPAEGRGDAS QVQIDRHEYAYRVG
Sequences:
>Translated_334_residues MFFDELNDEEWARLSTLIADEPIRLNRRGRPRAENRVVANAVLWILTTGEPWSKLPGRYPSGPTCRRRFEEWLASGTLGE MVRVLSEESGRAFAYVPPPPESVAPVRRAEPAADCDRLRGVFWQNPESWQLPVAQTDVCHPGAGVNVRRFASEDDEDGAH DADAHPHGFNVPGAPPVRDHAHGRAHAASFSFATHAPQTETYRGYTVYGIAQPVQNLMYRAWAEIVQDDRRVERSGLIGP RFTDAESAEQYALDWARQWIDRRCAGAPSVRETPAPVAGQAGKSVPTIAGLSALAMAETNIKHFAAELHRAPAEGRGDAS QVQIDRHEYAYRVG >Mature_334_residues MFFDELNDEEWARLSTLIADEPIRLNRRGRPRAENRVVANAVLWILTTGEPWSKLPGRYPSGPTCRRRFEEWLASGTLGE MVRVLSEESGRAFAYVPPPPESVAPVRRAEPAADCDRLRGVFWQNPESWQLPVAQTDVCHPGAGVNVRRFASEDDEDGAH DADAHPHGFNVPGAPPVRDHAHGRAHAASFSFATHAPQTETYRGYTVYGIAQPVQNLMYRAWAEIVQDDRRVERSGLIGP RFTDAESAEQYALDWARQWIDRRCAGAPSVRETPAPVAGQAGKSVPTIAGLSALAMAETNIKHFAAELHRAPAEGRGDAS QVQIDRHEYAYRVG
Specific function: Unknown
COG id: COG3293
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37019; Mature: 37019
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFDELNDEEWARLSTLIADEPIRLNRRGRPRAENRVVANAVLWILTTGEPWSKLPGRYP CCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCHHHHHEEEEEEEEEECCCCHHHCCCCCC SGPTCRRRFEEWLASGTLGEMVRVLSEESGRAFAYVPPPPESVAPVRRAEPAADCDRLRG CCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHCCCHHHHHHHHH VFWQNPESWQLPVAQTDVCHPGAGVNVRRFASEDDEDGAHDADAHPHGFNVPGAPPVRDH HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AHGRAHAASFSFATHAPQTETYRGYTVYGIAQPVQNLMYRAWAEIVQDDRRVERSGLIGP CCCCHHHHCCCHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RFTDAESAEQYALDWARQWIDRRCAGAPSVRETPAPVAGQAGKSVPTIAGLSALAMAETN CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH IKHFAAELHRAPAEGRGDASQVQIDRHEYAYRVG HHHHHHHHHCCCCCCCCCHHHEEEHHHHHHEECC >Mature Secondary Structure MFFDELNDEEWARLSTLIADEPIRLNRRGRPRAENRVVANAVLWILTTGEPWSKLPGRYP CCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCHHHHHEEEEEEEEEECCCCHHHCCCCCC SGPTCRRRFEEWLASGTLGEMVRVLSEESGRAFAYVPPPPESVAPVRRAEPAADCDRLRG CCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHCCCHHHHHHHHH VFWQNPESWQLPVAQTDVCHPGAGVNVRRFASEDDEDGAHDADAHPHGFNVPGAPPVRDH HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AHGRAHAASFSFATHAPQTETYRGYTVYGIAQPVQNLMYRAWAEIVQDDRRVERSGLIGP CCCCHHHHCCCHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RFTDAESAEQYALDWARQWIDRRCAGAPSVRETPAPVAGQAGKSVPTIAGLSALAMAETN CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH IKHFAAELHRAPAEGRGDASQVQIDRHEYAYRVG HHHHHHHHHCCCCCCCCCHHHEEEHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA