Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

Click here to switch to the map view.

The map label for this gene is 126446837

Identifier: 126446837

GI number: 126446837

Start: 264311

End: 264892

Strand: Direct

Name: 126446837

Synonym: BMA10247_A0302

Alternate gene names: NA

Gene position: 264311-264892 (Clockwise)

Preceding gene: 126445967

Following gene: 126446440

Centisome position: 11.23

GC content: 63.06

Gene sequence:

>582_bases
ATGACGCTTACCCGCGATTCGCTGTTGACGCTCGAAGCGTACGCGAAAGTACGCCGCCAGGAGCATGCGCGCGTGATCGC
GCACAAAAAGCGCCGCGCCGTGTCGATCGGCAATCATCTGCGCCTGCTGTTCGAGGACGAGACGACGATTCGCTATCAGA
TCCACGAAATGCTGCACATCGAGAAAATATTCGACGAGGACGGCATCCAGGCCGAGCTCGACGCGTACCTGCCGCTCGTG
CCGGACGGCAGCAATCTGAAGGCAACGCTGCAGATCGAATACGAAAACGAAACGCAGCGGCGCGCGGCGCTCGCGCGCAT
CGTCGGCATCGAGGACCGGGTATTTCTGCGGGTAGACGATGAGGCGCCTGTCTACGCGATCGCCGACGAGGACCTCGAGC
GCGACACCGCCGAGAAGACGTCGGCCGTGCACTTCCTGCGCTTCGAACTCGGCGACGCGATGAAGGCGAAGCTCAAGGCG
GGCGCGCCGCTGTCGATCGGCTGCGACCATCCTCACTATCCGATACAAGCGGCGAGGATCGATCCGGACGTGGCTGCCTC
TCTGGCCGGCGATCTCGACTGA

Upstream 100 bases:

>100_bases
ATCGGCGCGAAGGGCGTCGAGCCGCCGCCCTTCGCGCATCCGATCACGTTGCTGCGCAGGGCCTACGGCATCTGAGCGCG
CCGCAGACGAGGACCATGCG

Downstream 100 bases:

>100_bases
GCACGGCGGGCGACCGCGGAGCTGGCACCGGCCGCATTCAATCAATTATGAGATTGCGTGTAATGAAAAGTATAACGATC
GAGAAAGGATTTAATTGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MTLTRDSLLTLEAYAKVRRQEHARVIAHKKRRAVSIGNHLRLLFEDETTIRYQIHEMLHIEKIFDEDGIQAELDAYLPLV
PDGSNLKATLQIEYENETQRRAALARIVGIEDRVFLRVDDEAPVYAIADEDLERDTAEKTSAVHFLRFELGDAMKAKLKA
GAPLSIGCDHPHYPIQAARIDPDVAASLAGDLD

Sequences:

>Translated_193_residues
MTLTRDSLLTLEAYAKVRRQEHARVIAHKKRRAVSIGNHLRLLFEDETTIRYQIHEMLHIEKIFDEDGIQAELDAYLPLV
PDGSNLKATLQIEYENETQRRAALARIVGIEDRVFLRVDDEAPVYAIADEDLERDTAEKTSAVHFLRFELGDAMKAKLKA
GAPLSIGCDHPHYPIQAARIDPDVAASLAGDLD
>Mature_192_residues
TLTRDSLLTLEAYAKVRRQEHARVIAHKKRRAVSIGNHLRLLFEDETTIRYQIHEMLHIEKIFDEDGIQAELDAYLPLVP
DGSNLKATLQIEYENETQRRAALARIVGIEDRVFLRVDDEAPVYAIADEDLERDTAEKTSAVHFLRFELGDAMKAKLKAG
APLSIGCDHPHYPIQAARIDPDVAASLAGDLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21768; Mature: 21637

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTRDSLLTLEAYAKVRRQEHARVIAHKKRRAVSIGNHLRLLFEDETTIRYQIHEMLHI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEECCCEEEHHHHHHHHH
EKIFDEDGIQAELDAYLPLVPDGSNLKATLQIEYENETQRRAALARIVGIEDRVFLRVDD
HHHHCCCCCEEEEEEECEECCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCEEEEEECC
EAPVYAIADEDLERDTAEKTSAVHFLRFELGDAMKAKLKAGAPLSIGCDHPHYPIQAARI
CCCEEEEECCCCCHHHHHHHHHEEEEEEHHCHHHHHHHCCCCCEEECCCCCCCCEEEEEC
DPDVAASLAGDLD
CHHHHHHHCCCCC
>Mature Secondary Structure 
TLTRDSLLTLEAYAKVRRQEHARVIAHKKRRAVSIGNHLRLLFEDETTIRYQIHEMLHI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEECCCEEEHHHHHHHHH
EKIFDEDGIQAELDAYLPLVPDGSNLKATLQIEYENETQRRAALARIVGIEDRVFLRVDD
HHHHCCCCCEEEEEEECEECCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCEEEEEECC
EAPVYAIADEDLERDTAEKTSAVHFLRFELGDAMKAKLKAGAPLSIGCDHPHYPIQAARI
CCCEEEEECCCCCHHHHHHHHHEEEEEEHHCHHHHHHHCCCCCEEECCCCCCCCEEEEEC
DPDVAASLAGDLD
CHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA