| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126446412
Identifier: 126446412
GI number: 126446412
Start: 2305516
End: 2306298
Strand: Reverse
Name: 126446412
Synonym: BMA10247_A2375
Alternate gene names: NA
Gene position: 2306298-2305516 (Counterclockwise)
Preceding gene: 126445824
Following gene: 126445763
Centisome position: 98.03
GC content: 66.03
Gene sequence:
>783_bases GTGCGTCGCTTGTTTCGTCAATGGTGGGCCGGCTTGAGTTTCTGCGCGGCGGCGCTCGCGCACGCGCAAACGGCGCCCGA TCCGCAGGTGCTGCTCGCGCAAAGCGACGCGATCCGCACGCCGGCGAAGTCGTTCGTGCTGACCGCGACGCTGACCGAAT ACCGCGCGGGCAAGCAGGTCGACGGCAACACGCTGTCGATCTATTCGAAGCCCGATGCGCCGGGCGGCGCGTTCCGCACG CTGGTGCGCTTCGTCGCGCCCGCGCGCGATACGGGCAAGCTGATGCTGAAGAACGGCAACGATCTGTGGTTCTACGATCC GGCGAACCAGGCGAGCATCCGCATCTCGCCGGACCAGCGCCTGCTCGGCCAGGCCGCGAACGGCGACGTCGTGACCGTCA ATCTCGCGCACGATTATCGGGCGGCGCTCAAGGGCGCCGAGGACGTGATGGACGGCGACCGGCAGACGCGGCATTGCTAC AAGCTTTCATTGACGGGCAACGCGCCGGGCCTCACGTACCACCGGATCGAGATGTGGCTCGATGCGTCGAACAGCCGGCC GGTGAAGGCGAAGTTCTATTCGGAAAGCGACCGGCTGCTCAAGAGCGCGTTCTATCGGCGCTATACGGCCGAGCTCGGCG TCGAGCGTCCGACCGAAACGGTGATCATCGACGGTCTCGATCCGAACTGGGTCACGGTGATGCGCTTTTCCGGCTACGCG TGGCGCGACATTCCGGACGCATGGCTGCAGCGCGACTATCTGCCCCGCTTCCAGGCGCAATGA
Upstream 100 bases:
>100_bases ACGCGGCGCGGCTGTCGATCGTCGACGCGCTGCGCTATGCGTGAATCGCGGAAGTCTTCAGTTTGAACAACGAAAGATCG AATCGATCGGGAGGTGAAGC
Downstream 100 bases:
>100_bases CGCGCCGCGCGTGGGCCATCCTGATGTGCGCGGCCGCGGCGGCGATGCCGCTGCGCGCCGCCGCGACGGGCGACGCGGAT GCGGTGAACGACGCGACGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MRRLFRQWWAGLSFCAAALAHAQTAPDPQVLLAQSDAIRTPAKSFVLTATLTEYRAGKQVDGNTLSIYSKPDAPGGAFRT LVRFVAPARDTGKLMLKNGNDLWFYDPANQASIRISPDQRLLGQAANGDVVTVNLAHDYRAALKGAEDVMDGDRQTRHCY KLSLTGNAPGLTYHRIEMWLDASNSRPVKAKFYSESDRLLKSAFYRRYTAELGVERPTETVIIDGLDPNWVTVMRFSGYA WRDIPDAWLQRDYLPRFQAQ
Sequences:
>Translated_260_residues MRRLFRQWWAGLSFCAAALAHAQTAPDPQVLLAQSDAIRTPAKSFVLTATLTEYRAGKQVDGNTLSIYSKPDAPGGAFRT LVRFVAPARDTGKLMLKNGNDLWFYDPANQASIRISPDQRLLGQAANGDVVTVNLAHDYRAALKGAEDVMDGDRQTRHCY KLSLTGNAPGLTYHRIEMWLDASNSRPVKAKFYSESDRLLKSAFYRRYTAELGVERPTETVIIDGLDPNWVTVMRFSGYA WRDIPDAWLQRDYLPRFQAQ >Mature_260_residues MRRLFRQWWAGLSFCAAALAHAQTAPDPQVLLAQSDAIRTPAKSFVLTATLTEYRAGKQVDGNTLSIYSKPDAPGGAFRT LVRFVAPARDTGKLMLKNGNDLWFYDPANQASIRISPDQRLLGQAANGDVVTVNLAHDYRAALKGAEDVMDGDRQTRHCY KLSLTGNAPGLTYHRIEMWLDASNSRPVKAKFYSESDRLLKSAFYRRYTAELGVERPTETVIIDGLDPNWVTVMRFSGYA WRDIPDAWLQRDYLPRFQAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29262; Mature: 29262
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLFRQWWAGLSFCAAALAHAQTAPDPQVLLAQSDAIRTPAKSFVLTATLTEYRAGKQV CHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHEEEEEEHHHHCCCCCC DGNTLSIYSKPDAPGGAFRTLVRFVAPARDTGKLMLKNGNDLWFYDPANQASIRISPDQR CCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCCEEEEECCCCCCEEEECCCHH LLGQAANGDVVTVNLAHDYRAALKGAEDVMDGDRQTRHCYKLSLTGNAPGLTYHRIEMWL HHCCCCCCCEEEEEECHHHHHHHCCHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEEEE DASNSRPVKAKFYSESDRLLKSAFYRRYTAELGVERPTETVIIDGLDPNWVTVMRFSGYA ECCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEECCCC WRDIPDAWLQRDYLPRFQAQ CCCCCHHHHHHHCCCCCCCC >Mature Secondary Structure MRRLFRQWWAGLSFCAAALAHAQTAPDPQVLLAQSDAIRTPAKSFVLTATLTEYRAGKQV CHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHEEEEEEHHHHCCCCCC DGNTLSIYSKPDAPGGAFRTLVRFVAPARDTGKLMLKNGNDLWFYDPANQASIRISPDQR CCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCCEEEEECCCCCCEEEECCCHH LLGQAANGDVVTVNLAHDYRAALKGAEDVMDGDRQTRHCYKLSLTGNAPGLTYHRIEMWL HHCCCCCCCEEEEEECHHHHHHHCCHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEEEE DASNSRPVKAKFYSESDRLLKSAFYRRYTAELGVERPTETVIIDGLDPNWVTVMRFSGYA ECCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEECCCC WRDIPDAWLQRDYLPRFQAQ CCCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA