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The map label for this gene is ybjZ [C]

Identifier: 126445824

GI number: 126445824

Start: 2306355

End: 2307782

Strand: Reverse

Name: ybjZ [C]

Synonym: BMA10247_A2376

Alternate gene names: 126445824

Gene position: 2307782-2306355 (Counterclockwise)

Preceding gene: 126446374

Following gene: 126446412

Centisome position: 98.09

GC content: 70.31

Gene sequence:

>1428_bases
ATGCATACGTTCATGTTGGCGCTGCGCAACCTGCAGCGGAACCGGCGGCGCTCGATCACGACGCTGCTCGCGATGGTCGT
CGGCGTGTGCGCGGTGCTGCTGTTCGGCGGCTTCAGCAAGGACATCACGTTCGGATTGCAGACCGATTTCGTGCGGCGCA
GCGGCCATTTGCAGATTCAGCGTCACGGCTATTACCAGTACGGCAGCGGCAATCCGGTCGCCTACGGGATCGGCGGCTAT
GCGCGGCTGATCGCGCAACTGCGCGACGATCCGGTGCTCGCGCCGATGATCGCGGTGATCACCCCGACGCTGCAGTTCGG
CGGGATCGCCGGCAACTTCGAGGCGGGCGTGTCGCGCACGGTGCTCGCGCAGGGCGCGATCGCCGACGAGCAGGACCGGA
TGCAGCAATGGAACGACTACGGTTTTCCGTTGACGCCGAAGCCGTATCCGCTCGTCGGCACCGCGCCGGATGCGGCGATC
GTGGGCAACGGCGTCGCGCGTGTGCTGCATCTGTGCGCGCCGCTGCGCGTGCCCGATTGTGGCGACGGCGACGTCGCGAG
GCAGGCCGCGCCGCAAGCGGCGTCGGGCGCGTCGGGCGCGGATGCGCCGGCCGACGTGCTCGCGCTCGCGGCGGCCGAGG
CGCACGCACAGGAAAGCGGGCGCGGCGAGCGCGCGGGCGCGGCGCACATCGAGGTGCTCGCGGCGAACGCGTACGGCGCG
CCGAACGTCGGCGGCTTCACGGTTGCGAAGGCCGAGCAGCAGGGCGTGAAGGAGCTCGACGACGTTTATCTCGCGATGCA
CTTGCCGCGCGCGCAGCGGCTCGTCTACGGCGGCGACGCGCCGCGCGTGACGGCGATCGAGATCCAGCTCCGGCATACCG
CGCAGCTTCCCGCCGCGCGTGCGCGGCTCGACCGGCTGTTCGGCGGCCGCTTCGAGGGCCAGCCGCTCGACGTGCTCGAT
TTCGCCGCGCTGAACCCGTTCTACGACCAGACGAACCGGATGTTCTCGATGATCTTCGGCTTCGTGTTCGTGCTGATCGG
CGCGATCGTGCTGTTCGTCGTCAGCAACACGATGAGCACGGCGATCCTCGAGCGAACCGTGGAGATCGGCACGCTGCGCT
CGATGGGCGTGCGCCGCGGCGGCATCCAGGCGCTGTTCGTCTGCGAGGGCGCGCTGCTCGGCGTCGTCGGCGCGTCGATC
GGCGTGCTCGTCGCGCTCGCGTTCGCGTTCGTGGTCAATCACAGCGGGCTCGCGTGGACGCCGCCCGCGCGGATCGACTC
GGTCGCGCTGACGGTGCGCGTGTGGGGCGAATGGCGGCTCATCGCGCTGACGTTCGTCGGGCTCGCGTTCGTCGCGGGAT
TCTCGGCGTGGCTGCCCGCGCGCCACGCGGCGCGGCTGTCGATCGTCGACGCGCTGCGCTATGCGTGA

Upstream 100 bases:

>100_bases
CGCACGATCCGCAAGTGCTGGAGGCGGCCGACGACGTCGTGCAAATTCGCGACGGGCGCATCGTCGAGCGCCGCCGCATC
GCGCAGGAGGCGCAAGGCTG

Downstream 100 bases:

>100_bases
ATCGCGGAAGTCTTCAGTTTGAACAACGAAAGATCGAATCGATCGGGAGGTGAAGCGTGCGTCGCTTGTTTCGTCAATGG
TGGGCCGGCTTGAGTTTCTG

Product: efflux ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MHTFMLALRNLQRNRRRSITTLLAMVVGVCAVLLFGGFSKDITFGLQTDFVRRSGHLQIQRHGYYQYGSGNPVAYGIGGY
ARLIAQLRDDPVLAPMIAVITPTLQFGGIAGNFEAGVSRTVLAQGAIADEQDRMQQWNDYGFPLTPKPYPLVGTAPDAAI
VGNGVARVLHLCAPLRVPDCGDGDVARQAAPQAASGASGADAPADVLALAAAEAHAQESGRGERAGAAHIEVLAANAYGA
PNVGGFTVAKAEQQGVKELDDVYLAMHLPRAQRLVYGGDAPRVTAIEIQLRHTAQLPAARARLDRLFGGRFEGQPLDVLD
FAALNPFYDQTNRMFSMIFGFVFVLIGAIVLFVVSNTMSTAILERTVEIGTLRSMGVRRGGIQALFVCEGALLGVVGASI
GVLVALAFAFVVNHSGLAWTPPARIDSVALTVRVWGEWRLIALTFVGLAFVAGFSAWLPARHAARLSIVDALRYA

Sequences:

>Translated_475_residues
MHTFMLALRNLQRNRRRSITTLLAMVVGVCAVLLFGGFSKDITFGLQTDFVRRSGHLQIQRHGYYQYGSGNPVAYGIGGY
ARLIAQLRDDPVLAPMIAVITPTLQFGGIAGNFEAGVSRTVLAQGAIADEQDRMQQWNDYGFPLTPKPYPLVGTAPDAAI
VGNGVARVLHLCAPLRVPDCGDGDVARQAAPQAASGASGADAPADVLALAAAEAHAQESGRGERAGAAHIEVLAANAYGA
PNVGGFTVAKAEQQGVKELDDVYLAMHLPRAQRLVYGGDAPRVTAIEIQLRHTAQLPAARARLDRLFGGRFEGQPLDVLD
FAALNPFYDQTNRMFSMIFGFVFVLIGAIVLFVVSNTMSTAILERTVEIGTLRSMGVRRGGIQALFVCEGALLGVVGASI
GVLVALAFAFVVNHSGLAWTPPARIDSVALTVRVWGEWRLIALTFVGLAFVAGFSAWLPARHAARLSIVDALRYA
>Mature_475_residues
MHTFMLALRNLQRNRRRSITTLLAMVVGVCAVLLFGGFSKDITFGLQTDFVRRSGHLQIQRHGYYQYGSGNPVAYGIGGY
ARLIAQLRDDPVLAPMIAVITPTLQFGGIAGNFEAGVSRTVLAQGAIADEQDRMQQWNDYGFPLTPKPYPLVGTAPDAAI
VGNGVARVLHLCAPLRVPDCGDGDVARQAAPQAASGASGADAPADVLALAAAEAHAQESGRGERAGAAHIEVLAANAYGA
PNVGGFTVAKAEQQGVKELDDVYLAMHLPRAQRLVYGGDAPRVTAIEIQLRHTAQLPAARARLDRLFGGRFEGQPLDVLD
FAALNPFYDQTNRMFSMIFGFVFVLIGAIVLFVVSNTMSTAILERTVEIGTLRSMGVRRGGIQALFVCEGALLGVVGASI
GVLVALAFAFVVNHSGLAWTPPARIDSVALTVRVWGEWRLIALTFVGLAFVAGFSAWLPARHAARLSIVDALRYA

Specific function: Unknown

COG id: COG4591

COG function: function code M; ABC-type transport system, involved in lipoprotein release, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 50631; Mature: 50631

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTFMLALRNLQRNRRRSITTLLAMVVGVCAVLLFGGFSKDITFGLQTDFVRRSGHLQIQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHCCCCEEEE
RHGYYQYGSGNPVAYGIGGYARLIAQLRDDPVLAPMIAVITPTLQFGGIAGNFEAGVSRT
ECCEEEECCCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHCCCCCCHHHCCHHH
VLAQGAIADEQDRMQQWNDYGFPLTPKPYPLVGTAPDAAIVGNGVARVLHLCAPLRVPDC
HHHCCCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCC
GDGDVARQAAPQAASGASGADAPADVLALAAAEAHAQESGRGERAGAAHIEVLAANAYGA
CCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCC
PNVGGFTVAKAEQQGVKELDDVYLAMHLPRAQRLVYGGDAPRVTAIEIQLRHTAQLPAAR
CCCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHEEECCCCCCEEEEEEEEEHHHCCHHHH
ARLDRLFGGRFEGQPLDVLDFAALNPFYDQTNRMFSMIFGFVFVLIGAIVLFVVSNTMST
HHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AILERTVEIGTLRSMGVRRGGIQALFVCEGALLGVVGASIGVLVALAFAFVVNHSGLAWT
HHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PPARIDSVALTVRVWGEWRLIALTFVGLAFVAGFSAWLPARHAARLSIVDALRYA
CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHTFMLALRNLQRNRRRSITTLLAMVVGVCAVLLFGGFSKDITFGLQTDFVRRSGHLQIQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHCCCCEEEE
RHGYYQYGSGNPVAYGIGGYARLIAQLRDDPVLAPMIAVITPTLQFGGIAGNFEAGVSRT
ECCEEEECCCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHCCCCCCHHHCCHHH
VLAQGAIADEQDRMQQWNDYGFPLTPKPYPLVGTAPDAAIVGNGVARVLHLCAPLRVPDC
HHHCCCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCC
GDGDVARQAAPQAASGASGADAPADVLALAAAEAHAQESGRGERAGAAHIEVLAANAYGA
CCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCC
PNVGGFTVAKAEQQGVKELDDVYLAMHLPRAQRLVYGGDAPRVTAIEIQLRHTAQLPAAR
CCCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHEEECCCCCCEEEEEEEEEHHHCCHHHH
ARLDRLFGGRFEGQPLDVLDFAALNPFYDQTNRMFSMIFGFVFVLIGAIVLFVVSNTMST
HHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AILERTVEIGTLRSMGVRRGGIQALFVCEGALLGVVGASIGVLVALAFAFVVNHSGLAWT
HHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PPARIDSVALTVRVWGEWRLIALTFVGLAFVAGFSAWLPARHAARLSIVDALRYA
CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]