| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126446407
Identifier: 126446407
GI number: 126446407
Start: 537658
End: 538227
Strand: Direct
Name: 126446407
Synonym: BMA10247_A0589
Alternate gene names: NA
Gene position: 537658-538227 (Clockwise)
Preceding gene: 126447706
Following gene: 126446974
Centisome position: 22.85
GC content: 72.81
Gene sequence:
>570_bases ATGACGGCGCGAGTGGACGTGCGCGCGAGGCTCGACGACAGCCGCTTCGATGCATATCACTGGCGGATCGTCGCGCCGTG CGCGGCGTACCGCGTGATGGACGGCTTCGACGTGCAGGCGACGGGCGGCGTCGCGCCCGCCGTGATCCGCGAATGGGGGA TCGCGAAGGAGGCGCTGTCGCCCGCGTTCCGCGCCGGATGGTTCGGGATGCTGATCGGCTCGCTCGTGTTCAGCGCGCTC GCCGCCGTGTTCGCGGCGATTTTCATGGCCGGTTTTCCGATCGTCGGCGGACAGCCCGCGCTCAACGTGCTCGCGGCGGT CTACTATCCGGCGCCGCTGCGCTCGACAGGCATCGGCTGGCGCTCCGGCGTCGGCTGGATCGGCTCCGTCGTCGGGCCGG CGCGCGGCGGCGTGCTGATGTATCGGCAATGGTTGTCGTCGTTGCTGTTTCTCGCGGCGGCGGTGCCCGCGTGCGTGTCG ATGGCGGGGATCGGCGCGACCGCGCGTCCGGGCTTCGCCGGCGCGGGCGAGGCGATCGGCGCGCGCGGCGCGGCCGCGGC GGGCGAATGA
Upstream 100 bases:
>100_bases GCGAGGCACGGACGGCTCGTGCTCGAACTGTAGCTGTAGCGTGAGGCCCGTCGCCCCGGCGCGGGACGGACGAAGACAAC GGCATGGCGGGAGGCGACGA
Downstream 100 bases:
>100_bases TGTCGGCGCGGCGATGACGCAGGGGCGGGCGGCTCGCGCGGCACCGGCGGCTCCCGGGCGAGGCCGGCTTCGGCCCCGAT GCGCATTCGCGGTGTAATCG
Product: putative transporter
Products: NA
Alternate protein names: Facilitator Transporter; Facilitator Superfamily Protein; Protocatechuate Transmembrane Transporter; 4-Hydroxybenzoate Transporter Transmembrane Protein
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MTARVDVRARLDDSRFDAYHWRIVAPCAAYRVMDGFDVQATGGVAPAVIREWGIAKEALSPAFRAGWFGMLIGSLVFSAL AAVFAAIFMAGFPIVGGQPALNVLAAVYYPAPLRSTGIGWRSGVGWIGSVVGPARGGVLMYRQWLSSLLFLAAAVPACVS MAGIGATARPGFAGAGEAIGARGAAAAGE
Sequences:
>Translated_189_residues MTARVDVRARLDDSRFDAYHWRIVAPCAAYRVMDGFDVQATGGVAPAVIREWGIAKEALSPAFRAGWFGMLIGSLVFSAL AAVFAAIFMAGFPIVGGQPALNVLAAVYYPAPLRSTGIGWRSGVGWIGSVVGPARGGVLMYRQWLSSLLFLAAAVPACVS MAGIGATARPGFAGAGEAIGARGAAAAGE >Mature_188_residues TARVDVRARLDDSRFDAYHWRIVAPCAAYRVMDGFDVQATGGVAPAVIREWGIAKEALSPAFRAGWFGMLIGSLVFSALA AVFAAIFMAGFPIVGGQPALNVLAAVYYPAPLRSTGIGWRSGVGWIGSVVGPARGGVLMYRQWLSSLLFLAAAVPACVSM AGIGATARPGFAGAGEAIGARGAAAAGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19463; Mature: 19332
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARVDVRARLDDSRFDAYHWRIVAPCAAYRVMDGFDVQATGGVAPAVIREWGIAKEALS CCCCEEEHCCCCCCCCCHHHEEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHCHHHHHHC PAFRAGWFGMLIGSLVFSALAAVFAAIFMAGFPIVGGQPALNVLAAVYYPAPLRSTGIGW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC RSGVGWIGSVVGPARGGVLMYRQWLSSLLFLAAAVPACVSMAGIGATARPGFAGAGEAIG CCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHC ARGAAAAGE CCCCCCCCC >Mature Secondary Structure TARVDVRARLDDSRFDAYHWRIVAPCAAYRVMDGFDVQATGGVAPAVIREWGIAKEALS CCCEEEHCCCCCCCCCHHHEEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHCHHHHHHC PAFRAGWFGMLIGSLVFSALAAVFAAIFMAGFPIVGGQPALNVLAAVYYPAPLRSTGIGW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC RSGVGWIGSVVGPARGGVLMYRQWLSSLLFLAAAVPACVSMAGIGATARPGFAGAGEAIG CCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHC ARGAAAAGE CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA