| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is rhf [H]
Identifier: 126447706
GI number: 126447706
Start: 535236
End: 537590
Strand: Direct
Name: rhf [H]
Synonym: BMA10247_A0588
Alternate gene names: 126447706
Gene position: 535236-537590 (Clockwise)
Preceding gene: 126447323
Following gene: 126446407
Centisome position: 22.75
GC content: 69.98
Gene sequence:
>2355_bases ATGACGACGCATTCCGCGTCCACGCCGCCGGCCTTGCCCGCCGCGCAGTGTCCGTTCCGCCCCGTTTCAGACGATGCCGC CGCGCATCCGGCCGGTTGCCCGGCGAGCGCCGGGGCGGCGGCATTCGATCCGTTCGACGACGCCTATCAACAGGACCCGC CCGAGTACGTGCGTTGGGCGCGCGAGCGCGAGCCGGTGTTCTACAGCCCGAAGCTCGGTTACTGGGTCGTCGCGCGCTAT GACGACATCAAGACGATCTTTCGCGACAACCGGACCTTCAGCCCGTCGATCGCGCTCGAGAAGATCACGCCGACGGGGCC GGACGCGAACGCGGCGCTCGCGTCGTACGGCTATGCGATGGGCCGCACGCTCGTCAACGAGGACGAGCCCACGCACATGG CGCGGCGGCGTCTGCTGATCGAGCCGTTCACGCCCGACGCGCTGCGCGCGCATGAGCCGATGGTGCGACGGCTTGCGCGC GAATACGTCGACCGCTTCGTCGACGATGGCCGCGCGGACCTCGTCGACCAGATGCTGTGGGAAGTGCCGCTCACGGTCGC GCTGCATTTTCTGGGCGTGCCCGAAGCGGACATGGATACGCTGCGCGCGTACTCGATCGCGCATACCGTCAACACCTGGG GACGGCCGCGGCCGGACGAGCAAGTTGCGGTCGCGCATGCGGTCGGACAGTTCTGGCAGTACGCGGGCAAGGTGCTCGAG CAGATGCGGGAGGATCCGTCGGGGCCCGGCTGGATGCAGTTCGGCATCCGCATGCAGCGCGAGCATCCGGACATCGTCAC CGATTCGTATCTGCATTCGATGATGATGGCGGGCATCGTTGCCGCGCACGAGACCACCGCGAACGCAACGGCGAACGCGC TGAAGCTGTTGCTCGAGCATCCGCGCGCGTGGCGAGAGCTGTGTGACGACCCTGCGCTGATCCCGAACGCGGTCGACGAG TGCCTGCGTCACAGCGGATCGATCGTCGCGTGGCGGCGGATCGCGACGCGCGACGCGACGGTCGGCGGCGTTGCGATTCC CGCCGGCGCGAAGCTGTTGATCGTCACGTCGTCGGCGAATCGTGACGAGCGCCGCTTCGCCGATCCGGACCTGTTCGACA TCCACCGCGACAATCCCGCCGATCACCTGACGTTCGGCTACGGTTCGCATCAGTGCATGGGCAAGCATCTCGCGCGCATG GAGATGCAGATCTTCATCGACGAGCTGTCGCGCCGCCTGCCGCACATGCGGCTCGCCGAACAGCGCTTCACGTATGTGCC GAACACGTCGTTTCGTGGTCCGGAGCATCTGTGGGTCGAATGGGAGCCGGCGGAGAATCCGCAGCGGCGCGGCCACGGCG CGCGCCGCTGCGCGCTTGCCGTGCGCATCGGCGAATCGAACGCGCGCCGCGCGGGGCGCGCGCTGCGCGTCGACAGCGTG ATGCCGGTGGCCGAGCGCGTGCTGCGCGTACGCCTCGTCGCGCCCGACGGCGCGCCGCTGCCGCGCTGGAGCGCGGGCGC GCATATCGACGTTGAATGCGGCGACACCGGGCTCTCCCGACAGTACTCGCTGTGCGGCGATCCGGCCGAGCGCGGCGTAT ACGAGATCGCGGTGCTGCGCGAGCCGGCGAGCCGCGGCGGCTCCGCATGGATGCACGAGCGGCTGCGGCCCGGCATGCGC GTGAAGATTCGCGGGCCGCGCAACCACTTCCGGCTCGACGGGCACGCCGCCCGCGCGATCCTGATCGCGGGCGGCATCGG CATCACGCCGATCGGCGCGATCGCACGCGAGGCGCGCGCGCGCGGCATCGACTACGCGCTGCATTACTGCGGCCGCAGCC GCCGGACGATGGCGTTCGTCGACGAGCTCGCCGCGCTGCACGGTGAGCGGCTTCGCCTGCACGTGTCGGACGAAGGCACG CGGCATGATTTTTCCGCGCTCGACGTCGCTGCCGGCACGCAGGTGTATGCGTGCGGTCCCGCGCGCATGCTCGACGCGCT GGCCGCGTGCGCCGCGCATTGGCCGGCGCATGCGCTGCGCGTCGAGCATTTCGCGGCCGCCGCGCCGCGCGTCGATCCGC GCACCGATCAGCCGTTCGAGGTCGAGCTGAAGGATTCGGGGCTCACGCTGACGGTGCCCGCGAACCGGACGCTGCTGGCG ACGCTGCGCGCGGCGAACGTCGACGTGCAGAGCGACTGCGAGGAAGGGCTGTGCGGCTCGTGCGAGGTGCGCGTGCTTGC CGGCGAGGTTGACCATCGTGACAGCGTGCTGAGCGCGGACGAGCGTGCGCTGAACACGCGCATGATGGCGTGCTGCTCGC GCGCGAGGCACGGACGGCTCGTGCTCGAACTGTAG
Upstream 100 bases:
>100_bases GGCGATGCAGGTTAACGCGATCATTGATTTTGCGCAGTGCGTACTAGCGTTACGCAAAGCGCAATTCGATCCAGCGTAAT TCGACCCCTGGAGGACTGCC
Downstream 100 bases:
>100_bases CTGTAGCGTGAGGCCCGTCGCCCCGGCGCGGGACGGACGAAGACAACGGCATGGCGGGAGGCGACGAATGACGGCGCGAG TGGACGTGCGCGCGAGGCTC
Product: cytochrome P450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 784; Mature: 783
Protein sequence:
>784_residues MTTHSASTPPALPAAQCPFRPVSDDAAAHPAGCPASAGAAAFDPFDDAYQQDPPEYVRWAREREPVFYSPKLGYWVVARY DDIKTIFRDNRTFSPSIALEKITPTGPDANAALASYGYAMGRTLVNEDEPTHMARRRLLIEPFTPDALRAHEPMVRRLAR EYVDRFVDDGRADLVDQMLWEVPLTVALHFLGVPEADMDTLRAYSIAHTVNTWGRPRPDEQVAVAHAVGQFWQYAGKVLE QMREDPSGPGWMQFGIRMQREHPDIVTDSYLHSMMMAGIVAAHETTANATANALKLLLEHPRAWRELCDDPALIPNAVDE CLRHSGSIVAWRRIATRDATVGGVAIPAGAKLLIVTSSANRDERRFADPDLFDIHRDNPADHLTFGYGSHQCMGKHLARM EMQIFIDELSRRLPHMRLAEQRFTYVPNTSFRGPEHLWVEWEPAENPQRRGHGARRCALAVRIGESNARRAGRALRVDSV MPVAERVLRVRLVAPDGAPLPRWSAGAHIDVECGDTGLSRQYSLCGDPAERGVYEIAVLREPASRGGSAWMHERLRPGMR VKIRGPRNHFRLDGHAARAILIAGGIGITPIGAIAREARARGIDYALHYCGRSRRTMAFVDELAALHGERLRLHVSDEGT RHDFSALDVAAGTQVYACGPARMLDALAACAAHWPAHALRVEHFAAAAPRVDPRTDQPFEVELKDSGLTLTVPANRTLLA TLRAANVDVQSDCEEGLCGSCEVRVLAGEVDHRDSVLSADERALNTRMMACCSRARHGRLVLEL
Sequences:
>Translated_784_residues MTTHSASTPPALPAAQCPFRPVSDDAAAHPAGCPASAGAAAFDPFDDAYQQDPPEYVRWAREREPVFYSPKLGYWVVARY DDIKTIFRDNRTFSPSIALEKITPTGPDANAALASYGYAMGRTLVNEDEPTHMARRRLLIEPFTPDALRAHEPMVRRLAR EYVDRFVDDGRADLVDQMLWEVPLTVALHFLGVPEADMDTLRAYSIAHTVNTWGRPRPDEQVAVAHAVGQFWQYAGKVLE QMREDPSGPGWMQFGIRMQREHPDIVTDSYLHSMMMAGIVAAHETTANATANALKLLLEHPRAWRELCDDPALIPNAVDE CLRHSGSIVAWRRIATRDATVGGVAIPAGAKLLIVTSSANRDERRFADPDLFDIHRDNPADHLTFGYGSHQCMGKHLARM EMQIFIDELSRRLPHMRLAEQRFTYVPNTSFRGPEHLWVEWEPAENPQRRGHGARRCALAVRIGESNARRAGRALRVDSV MPVAERVLRVRLVAPDGAPLPRWSAGAHIDVECGDTGLSRQYSLCGDPAERGVYEIAVLREPASRGGSAWMHERLRPGMR VKIRGPRNHFRLDGHAARAILIAGGIGITPIGAIAREARARGIDYALHYCGRSRRTMAFVDELAALHGERLRLHVSDEGT RHDFSALDVAAGTQVYACGPARMLDALAACAAHWPAHALRVEHFAAAAPRVDPRTDQPFEVELKDSGLTLTVPANRTLLA TLRAANVDVQSDCEEGLCGSCEVRVLAGEVDHRDSVLSADERALNTRMMACCSRARHGRLVLEL >Mature_783_residues TTHSASTPPALPAAQCPFRPVSDDAAAHPAGCPASAGAAAFDPFDDAYQQDPPEYVRWAREREPVFYSPKLGYWVVARYD DIKTIFRDNRTFSPSIALEKITPTGPDANAALASYGYAMGRTLVNEDEPTHMARRRLLIEPFTPDALRAHEPMVRRLARE YVDRFVDDGRADLVDQMLWEVPLTVALHFLGVPEADMDTLRAYSIAHTVNTWGRPRPDEQVAVAHAVGQFWQYAGKVLEQ MREDPSGPGWMQFGIRMQREHPDIVTDSYLHSMMMAGIVAAHETTANATANALKLLLEHPRAWRELCDDPALIPNAVDEC LRHSGSIVAWRRIATRDATVGGVAIPAGAKLLIVTSSANRDERRFADPDLFDIHRDNPADHLTFGYGSHQCMGKHLARME MQIFIDELSRRLPHMRLAEQRFTYVPNTSFRGPEHLWVEWEPAENPQRRGHGARRCALAVRIGESNARRAGRALRVDSVM PVAERVLRVRLVAPDGAPLPRWSAGAHIDVECGDTGLSRQYSLCGDPAERGVYEIAVLREPASRGGSAWMHERLRPGMRV KIRGPRNHFRLDGHAARAILIAGGIGITPIGAIAREARARGIDYALHYCGRSRRTMAFVDELAALHGERLRLHVSDEGTR HDFSALDVAAGTQVYACGPARMLDALAACAAHWPAHALRVEHFAAAAPRVDPRTDQPFEVELKDSGLTLTVPANRTLLAT LRAANVDVQSDCEEGLCGSCEVRVLAGEVDHRDSVLSADERALNTRMMACCSRARHGRLVLEL
Specific function: Degradation of thiocarbamate herbicides [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
Organism=Escherichia coli, GI1788104, Length=320, Percent_Identity=40.3125, Blast_Score=220, Evalue=2e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 86814; Mature: 86683
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: PS00086 CYTOCHROME_P450 ; PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTHSASTPPALPAAQCPFRPVSDDAAAHPAGCPASAGAAAFDPFDDAYQQDPPEYVRWA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHH REREPVFYSPKLGYWVVARYDDIKTIFRDNRTFSPSIALEKITPTGPDANAALASYGYAM HHCCCEEECCCCCEEEEEEEHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHH GRTLVNEDEPTHMARRRLLIEPFTPDALRAHEPMVRRLAREYVDRFVDDGRADLVDQMLW CCHHCCCCCHHHHHHHHHEECCCCCHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH EVPLTVALHFLGVPEADMDTLRAYSIAHTVNTWGRPRPDEQVAVAHAVGQFWQYAGKVLE HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH QMREDPSGPGWMQFGIRMQREHPDIVTDSYLHSMMMAGIVAAHETTANATANALKLLLEH HHHHCCCCCCCEEECEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC PRAWRELCDDPALIPNAVDECLRHSGSIVAWRRIATRDATVGGVAIPAGAKLLIVTSSAN CHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEHHHCCCCCCCCEEECCCCEEEEEECCCC RDERRFADPDLFDIHRDNPADHLTFGYGSHQCMGKHLARMEMQIFIDELSRRLPHMRLAE CCHHHCCCCCCEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH QRFTYVPNTSFRGPEHLWVEWEPAENPQRRGHGARRCALAVRIGESNARRAGRALRVDSV HHHEECCCCCCCCCCEEEEEECCCCCHHHHCCCHHEEEEEEEECCCCHHHCCCEEEECHH MPVAERVLRVRLVAPDGAPLPRWSAGAHIDVECGDTGLSRQYSLCGDPAERGVYEIAVLR HHHHHHHHEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCEEEEEEEE EPASRGGSAWMHERLRPGMRVKIRGPRNHFRLDGHAARAILIAGGIGITPIGAIAREARA CCHHCCCHHHHHHHCCCCCEEEEECCCCCEEECCCCEEEEEEECCCCCCHHHHHHHHHHH RGIDYALHYCGRSRRTMAFVDELAALHGERLRLHVSDEGTRHDFSALDVAAGTQVYACGP CCHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCCCCEEEECCH ARMLDALAACAAHWPAHALRVEHFAAAAPRVDPRTDQPFEVELKDSGLTLTVPANRTLLA HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEECCCCEEEE TLRAANVDVQSDCEEGLCGSCEVRVLAGEVDHRDSVLSADERALNTRMMACCSRARHGRL EHHHCCCCCHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE VLEL EEEC >Mature Secondary Structure TTHSASTPPALPAAQCPFRPVSDDAAAHPAGCPASAGAAAFDPFDDAYQQDPPEYVRWA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHH REREPVFYSPKLGYWVVARYDDIKTIFRDNRTFSPSIALEKITPTGPDANAALASYGYAM HHCCCEEECCCCCEEEEEEEHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHH GRTLVNEDEPTHMARRRLLIEPFTPDALRAHEPMVRRLAREYVDRFVDDGRADLVDQMLW CCHHCCCCCHHHHHHHHHEECCCCCHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH EVPLTVALHFLGVPEADMDTLRAYSIAHTVNTWGRPRPDEQVAVAHAVGQFWQYAGKVLE HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH QMREDPSGPGWMQFGIRMQREHPDIVTDSYLHSMMMAGIVAAHETTANATANALKLLLEH HHHHCCCCCCCEEECEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC PRAWRELCDDPALIPNAVDECLRHSGSIVAWRRIATRDATVGGVAIPAGAKLLIVTSSAN CHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEHHHCCCCCCCCEEECCCCEEEEEECCCC RDERRFADPDLFDIHRDNPADHLTFGYGSHQCMGKHLARMEMQIFIDELSRRLPHMRLAE CCHHHCCCCCCEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH QRFTYVPNTSFRGPEHLWVEWEPAENPQRRGHGARRCALAVRIGESNARRAGRALRVDSV HHHEECCCCCCCCCCEEEEEECCCCCHHHHCCCHHEEEEEEEECCCCHHHCCCEEEECHH MPVAERVLRVRLVAPDGAPLPRWSAGAHIDVECGDTGLSRQYSLCGDPAERGVYEIAVLR HHHHHHHHEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCEEEEEEEE EPASRGGSAWMHERLRPGMRVKIRGPRNHFRLDGHAARAILIAGGIGITPIGAIAREARA CCHHCCCHHHHHHHCCCCCEEEEECCCCCEEECCCCEEEEEEECCCCCCHHHHHHHHHHH RGIDYALHYCGRSRRTMAFVDELAALHGERLRLHVSDEGTRHDFSALDVAAGTQVYACGP CCHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCCCCEEEECCH ARMLDALAACAAHWPAHALRVEHFAAAAPRVDPRTDQPFEVELKDSGLTLTVPANRTLLA HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEECCCCEEEE TLRAANVDVQSDCEEGLCGSCEVRVLAGEVDHRDSVLSADERALNTRMMACCSRARHGRL EHHHCCCCCHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE VLEL EEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FMN. [C]
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7836301 [H]