| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
Click here to switch to the map view.
The map label for this gene is 126446170
Identifier: 126446170
GI number: 126446170
Start: 609729
End: 611027
Strand: Direct
Name: 126446170
Synonym: BMA10247_A0659
Alternate gene names: NA
Gene position: 609729-611027 (Clockwise)
Preceding gene: 126447055
Following gene: 126446680
Centisome position: 25.92
GC content: 71.98
Gene sequence:
>1299_bases ATGAGCGCGCAGGTGATTCAAATCGGCCGCCAGCGTTTCGTCGGCGGCCTGTTCTGGCAATCGTTGTCGAGGCGCAACGA GTTGCGCGCCGAAGCGGTCGAGCTCGCGAAGAAACTGAAGTTCGACCTGATGGTGCTGCGCATCGATCGCGGCGTCGCGG CGGCGGGCTACGCGAACACACGCGACGGCTTCGCGCCCGGGCATCTGTCGCTCGGCGCGATGGTGTCGCGCGCGATCGCG CTGGAGGGCGCGTTCTACAACGGCCGGCGTCAGCCCGCGCCGAACTGGCTCGGCGCGTTTGCGCTGCCCGACGGGCGCTG GGCGTACTTCGCGGTGCGCGACCACGCGTTCATGCCGAACGGCGACTGGGTCGGCAGCCGCGAGGAGGCGCTCGAGCGGC TGCATACCGATTACGCGTGGGGCGGCTGGAACGTCGTGATCGGCGAGCCGGAGCTCGAGCGGCAGGGCTTCCAGAATTTT CAGCCGAAGCGGCTCGACGATCTGCTGCCGCGCCGCGGCGGCCGGCCGCGCACCGAGCGCTGGTGGGCGCTCAGGCCCGT CGAGCGGCGTCTGTCGCCGCGCGCCGCGCTGATCGCCGCGACGGCGGCGTGCGTCGTGCTCGGCGGCGCGTTCGCGTACT GGCATCATCGCGCGAAGGTCGAGGCCGAGGAGCGCGAGGCGGCGCTCGAGCGCGTGCGCGCGGAGCTCGCCGCGCGGCAG GCGAGAAGCGGCCCCGTCGCGCCGCCGTGGGCGGCGCTGCCCGACGCGCTCGCGTTCGCGCGCGCGTGCGCGATGCGCTT CGGGCGGCTCGCGCCGGGCGGCTGGCGGCTCGAACGCTACGAGTGTACGCCGGGCACCGCGCACTACGCGTGGGCGCGCA ACGGCTCGAACGTGCGCTACCTGCTCGTGGTGGAACCCGGCGCGACGCTCGATACCGACGGCGAGCGCGCGACGCTCGAC GTGCCGCTCACCGCGCCGACGGCGAACGATACGCCGCTCGCCGACGATTCGGTTGTCAGGACACAACTTCTCGCGCGTCT CCAATGGCTCGACGCGGCCGCTAAACTGGAGCGGCTGCTTCCCGAACAGGGGCCGCGCGCGCCGCTCGCGAATCTCGCGC AACAGGCGGCCGCCTTGCCCGCTTCGCCCACGTGGCGCGCGTACCGGCTGAACGCGAATCTCGGCGGCATCGCGCCGCCG GAGTTCGTGCGCGCGATCGACGTGCCGGGGTTGCGCGTCGAGCGCATCGCTTACCAGAACAATCAGTGGACCCTCGAAGG AGTGCTCTATGCGAAATAG
Upstream 100 bases:
>100_bases TCGCGCTCGGCGGCGGCTACGAGGCGCAGCGCGCGCGCGAGGTGATCGTGATCCTGATCACGCCCGTCACGCAGCGCGGC GGCGCCTGACGGAGCCGGCG
Downstream 100 bases:
>100_bases TCGCGTCCGTTTGATGTGCGCGCTGGGCGTGGCGCTCTTCGCCGGCGCCGCGCGCGCGGCGGGGCCCGCGCCGTCCGACG ACGGCGGCGCGACCGCCGCG
Product: putative PilO
Products: NA
Alternate protein names: Type IV Tfp Pilus Assembly PilO Protein
Number of amino acids: Translated: 432; Mature: 431
Protein sequence:
>432_residues MSAQVIQIGRQRFVGGLFWQSLSRRNELRAEAVELAKKLKFDLMVLRIDRGVAAAGYANTRDGFAPGHLSLGAMVSRAIA LEGAFYNGRRQPAPNWLGAFALPDGRWAYFAVRDHAFMPNGDWVGSREEALERLHTDYAWGGWNVVIGEPELERQGFQNF QPKRLDDLLPRRGGRPRTERWWALRPVERRLSPRAALIAATAACVVLGGAFAYWHHRAKVEAEEREAALERVRAELAARQ ARSGPVAPPWAALPDALAFARACAMRFGRLAPGGWRLERYECTPGTAHYAWARNGSNVRYLLVVEPGATLDTDGERATLD VPLTAPTANDTPLADDSVVRTQLLARLQWLDAAAKLERLLPEQGPRAPLANLAQQAAALPASPTWRAYRLNANLGGIAPP EFVRAIDVPGLRVERIAYQNNQWTLEGVLYAK
Sequences:
>Translated_432_residues MSAQVIQIGRQRFVGGLFWQSLSRRNELRAEAVELAKKLKFDLMVLRIDRGVAAAGYANTRDGFAPGHLSLGAMVSRAIA LEGAFYNGRRQPAPNWLGAFALPDGRWAYFAVRDHAFMPNGDWVGSREEALERLHTDYAWGGWNVVIGEPELERQGFQNF QPKRLDDLLPRRGGRPRTERWWALRPVERRLSPRAALIAATAACVVLGGAFAYWHHRAKVEAEEREAALERVRAELAARQ ARSGPVAPPWAALPDALAFARACAMRFGRLAPGGWRLERYECTPGTAHYAWARNGSNVRYLLVVEPGATLDTDGERATLD VPLTAPTANDTPLADDSVVRTQLLARLQWLDAAAKLERLLPEQGPRAPLANLAQQAAALPASPTWRAYRLNANLGGIAPP EFVRAIDVPGLRVERIAYQNNQWTLEGVLYAK >Mature_431_residues SAQVIQIGRQRFVGGLFWQSLSRRNELRAEAVELAKKLKFDLMVLRIDRGVAAAGYANTRDGFAPGHLSLGAMVSRAIAL EGAFYNGRRQPAPNWLGAFALPDGRWAYFAVRDHAFMPNGDWVGSREEALERLHTDYAWGGWNVVIGEPELERQGFQNFQ PKRLDDLLPRRGGRPRTERWWALRPVERRLSPRAALIAATAACVVLGGAFAYWHHRAKVEAEEREAALERVRAELAARQA RSGPVAPPWAALPDALAFARACAMRFGRLAPGGWRLERYECTPGTAHYAWARNGSNVRYLLVVEPGATLDTDGERATLDV PLTAPTANDTPLADDSVVRTQLLARLQWLDAAAKLERLLPEQGPRAPLANLAQQAAALPASPTWRAYRLNANLGGIAPPE FVRAIDVPGLRVERIAYQNNQWTLEGVLYAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47871; Mature: 47740
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAQVIQIGRQRFVGGLFWQSLSRRNELRAEAVELAKKLKFDLMVLRIDRGVAAAGYANT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEECCCCCC RDGFAPGHLSLGAMVSRAIALEGAFYNGRRQPAPNWLGAFALPDGRWAYFAVRDHAFMPN CCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCEEEECCCCCEEEEEEECCEECCC GDWVGSREEALERLHTDYAWGGWNVVIGEPELERQGFQNFQPKRLDDLLPRRGGRPRTER CCCCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCC WWALRPVERRLSPRAALIAATAACVVLGGAFAYWHHRAKVEAEEREAALERVRAELAARQ EEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ARSGPVAPPWAALPDALAFARACAMRFGRLAPGGWRLERYECTPGTAHYAWARNGSNVRY HCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEECCCCCEEE LLVVEPGATLDTDGERATLDVPLTAPTANDTPLADDSVVRTQLLARLQWLDAAAKLERLL EEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC PEQGPRAPLANLAQQAAALPASPTWRAYRLNANLGGIAPPEFVRAIDVPGLRVERIAYQN CCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEEEC NQWTLEGVLYAK CCEEEEEEEEEC >Mature Secondary Structure SAQVIQIGRQRFVGGLFWQSLSRRNELRAEAVELAKKLKFDLMVLRIDRGVAAAGYANT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEECCCCCC RDGFAPGHLSLGAMVSRAIALEGAFYNGRRQPAPNWLGAFALPDGRWAYFAVRDHAFMPN CCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCEEEECCCCCEEEEEEECCEECCC GDWVGSREEALERLHTDYAWGGWNVVIGEPELERQGFQNFQPKRLDDLLPRRGGRPRTER CCCCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCC WWALRPVERRLSPRAALIAATAACVVLGGAFAYWHHRAKVEAEEREAALERVRAELAARQ EEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ARSGPVAPPWAALPDALAFARACAMRFGRLAPGGWRLERYECTPGTAHYAWARNGSNVRY HCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEECCCCCEEE LLVVEPGATLDTDGERATLDVPLTAPTANDTPLADDSVVRTQLLARLQWLDAAAKLERLL EEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC PEQGPRAPLANLAQQAAALPASPTWRAYRLNANLGGIAPPEFVRAIDVPGLRVERIAYQN CCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEEEC NQWTLEGVLYAK CCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA