| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126446680
Identifier: 126446680
GI number: 126446680
Start: 611041
End: 611541
Strand: Direct
Name: 126446680
Synonym: BMA10247_A0660
Alternate gene names: NA
Gene position: 611041-611541 (Clockwise)
Preceding gene: 126446170
Following gene: 126447382
Centisome position: 25.97
GC content: 76.85
Gene sequence:
>501_bases ATGTGCGCGCTGGGCGTGGCGCTCTTCGCCGGCGCCGCGCGCGCGGCGGGGCCCGCGCCGTCCGACGACGGCGGCGCGAC CGCCGCGCGGCTCACGCAGCTGCAAAGCGAAACCGTGCTGCTGCAGGCGCAGTTGAAGAAGCTCGAGACCCAGCAGCAGG TCATCGAGCGCGCCGCGCAGCTCGCGCGCGCGCTCGGCGGCGGCGCGCCGGCCGGGCAGTTCGCGGTGACGGCGATCGAA GGCGTCGGCAAGCGCGCGTTCGCGACGCTGCGGATGAACGGCGGCGCGGAATTCGAGGTGCAGCGCGGCGACGCGCTGCC CGACGGCGCACGCGTGGTCGCGATCGAGCCGCGCGCGGTCGTCGTGTCGAATCGCGGGCGCACGTACCGGTTGTCGACGG GCGCGCCGCCGTCGCCTGCCTATGCGGGCAATCCGCCGCTGCCGGCCGACGCGGCCGCGCCGCTGCCGACGTTGCCCGCG CGGCCGGCGAGCGGATCATGA
Upstream 100 bases:
>100_bases GCGATCGACGTGCCGGGGTTGCGCGTCGAGCGCATCGCTTACCAGAACAATCAGTGGACCCTCGAAGGAGTGCTCTATGC GAAATAGTCGCGTCCGTTTG
Downstream 100 bases:
>100_bases GCCACGACGCGCAACGACCCGACACGGCCGCCGCGCGCGCGACGCCGAGCGCCGCCGACGCCGCCGCGCCGCCGCGCGGC CCGCGCGCGGTCAGCGAGGC
Product: putative type IV pilus biogenesis protein PilP
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MCALGVALFAGAARAAGPAPSDDGGATAARLTQLQSETVLLQAQLKKLETQQQVIERAAQLARALGGGAPAGQFAVTAIE GVGKRAFATLRMNGGAEFEVQRGDALPDGARVVAIEPRAVVVSNRGRTYRLSTGAPPSPAYAGNPPLPADAAAPLPTLPA RPASGS
Sequences:
>Translated_166_residues MCALGVALFAGAARAAGPAPSDDGGATAARLTQLQSETVLLQAQLKKLETQQQVIERAAQLARALGGGAPAGQFAVTAIE GVGKRAFATLRMNGGAEFEVQRGDALPDGARVVAIEPRAVVVSNRGRTYRLSTGAPPSPAYAGNPPLPADAAAPLPTLPA RPASGS >Mature_166_residues MCALGVALFAGAARAAGPAPSDDGGATAARLTQLQSETVLLQAQLKKLETQQQVIERAAQLARALGGGAPAGQFAVTAIE GVGKRAFATLRMNGGAEFEVQRGDALPDGARVVAIEPRAVVVSNRGRTYRLSTGAPPSPAYAGNPPLPADAAAPLPTLPA RPASGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16676; Mature: 16676
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCALGVALFAGAARAAGPAPSDDGGATAARLTQLQSETVLLQAQLKKLETQQQVIERAAQ CCCHHHHHHHCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LARALGGGAPAGQFAVTAIEGVGKRAFATLRMNGGAEFEVQRGDALPDGARVVAIEPRAV HHHHHCCCCCCCCEEEHHHHHCCCCEEEEEEECCCCEEEEECCCCCCCCCEEEEECCCEE VVSNRGRTYRLSTGAPPSPAYAGNPPLPADAAAPLPTLPARPASGS EEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MCALGVALFAGAARAAGPAPSDDGGATAARLTQLQSETVLLQAQLKKLETQQQVIERAAQ CCCHHHHHHHCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LARALGGGAPAGQFAVTAIEGVGKRAFATLRMNGGAEFEVQRGDALPDGARVVAIEPRAV HHHHHCCCCCCCCEEEHHHHHCCCCEEEEEEECCCCEEEEECCCCCCCCCEEEEECCCEE VVSNRGRTYRLSTGAPPSPAYAGNPPLPADAAAPLPTLPARPASGS EEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA