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The map label for this gene is rutF [H]

Identifier: 126446122

GI number: 126446122

Start: 2224445

End: 2225125

Strand: Reverse

Name: rutF [H]

Synonym: BMA10247_A2295

Alternate gene names: 126446122

Gene position: 2225125-2224445 (Counterclockwise)

Preceding gene: 126447195

Following gene: 126447608

Centisome position: 94.58

GC content: 72.98

Gene sequence:

>681_bases
ATGGCGAGCCCATGGACCGAGCGCGCGACGCGCGCCGCAAGCGACGCGCACCCCGCGTTCGAGCCGCCCGTGCCCGAGCG
GGCGCGGCGCGACGCAACGTGCGCCGAGCACCGCGCATCGACGCCGAACGCACGCGCATCGGCATCGAACGCCGCCGCAT
CGCCCACGCCCGCGCCGGATGCGCTCGCGCAGCATTTCAAGACCGCGATGCGCCGGCTGACATCGACGGTGTCGATCGTC
GCGACGCGCGACGCGTGCGCGCGCTACGGCATGGCGGCGACCGCGGTGAGCGCGCTCAGCACCGAGCCGCCCGCGATCCT
CGTATGCATCAATCGCGCGGCGACGCTGCATGCGCCGCTGATGCGCGTGCGCCGCTTCTCGCTGAACCTGCTGCACGAGC
GCCAGCTCGAGCTGATCGCGCCGTTCAGCGGCAAGCTCGATCACGACGCGCGTTTCGCGCACGGCGAATGGCGCGATGCG
TACGGCGTGCCGATGCTCGCCGGCGCGCAGGCGACGCTGTGGTGCGCGGTGGACGGCGATTTCAGCTACGGCAGCCATAC
GATCGTGATCGGCCGGGTCGATTCGGTGTCGACCGCCGGCCCCGTCGCGCCGCTGTTGTGGCAGGACGGCGCGCCGTGCG
CGGCGCGCGCCCTGGCCCCATGCCTGCACGATGCGCAATGA

Upstream 100 bases:

>100_bases
TCCTGATCGGCGCCGCCGCCGCGCGCCCCGGCGCGGCCGAATTCGCGTTGTTCGACGACCGTTTCGCAACGACCGCCCGA
CACCGGAAGGAGGAGACATA

Downstream 100 bases:

>100_bases
CGCCGCGCGGCCGAGGGAATTCCTGCACAAATGCGAAACGCTCATATAGACTGCAAAGCGAATCATCCGATGGTTCCATG
GCCGCAGCGCGGCGCGCCGA

Product: flavin reductase domain-containing protein

Products: NA

Alternate protein names: FMN reductase; NAD(P)H:flavin oxidoreductase [H]

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MASPWTERATRAASDAHPAFEPPVPERARRDATCAEHRASTPNARASASNAAASPTPAPDALAQHFKTAMRRLTSTVSIV
ATRDACARYGMAATAVSALSTEPPAILVCINRAATLHAPLMRVRRFSLNLLHERQLELIAPFSGKLDHDARFAHGEWRDA
YGVPMLAGAQATLWCAVDGDFSYGSHTIVIGRVDSVSTAGPVAPLLWQDGAPCAARALAPCLHDAQ

Sequences:

>Translated_226_residues
MASPWTERATRAASDAHPAFEPPVPERARRDATCAEHRASTPNARASASNAAASPTPAPDALAQHFKTAMRRLTSTVSIV
ATRDACARYGMAATAVSALSTEPPAILVCINRAATLHAPLMRVRRFSLNLLHERQLELIAPFSGKLDHDARFAHGEWRDA
YGVPMLAGAQATLWCAVDGDFSYGSHTIVIGRVDSVSTAGPVAPLLWQDGAPCAARALAPCLHDAQ
>Mature_225_residues
ASPWTERATRAASDAHPAFEPPVPERARRDATCAEHRASTPNARASASNAAASPTPAPDALAQHFKTAMRRLTSTVSIVA
TRDACARYGMAATAVSALSTEPPAILVCINRAATLHAPLMRVRRFSLNLLHERQLELIAPFSGKLDHDARFAHGEWRDAY
GVPMLAGAQATLWCAVDGDFSYGSHTIVIGRVDSVSTAGPVAPLLWQDGAPCAARALAPCLHDAQ

Specific function: Catalyzes the reduction of FMN to FMNH2 which is used to reduce pyrimidine by RutA via the Rut pathway [H]

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the non-flavoprotein flavin reductase family. RutF subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081819, Length=147, Percent_Identity=29.9319727891156, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019917
- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: =1.5.1.29 [H]

Molecular weight: Translated: 24010; Mature: 23879

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASPWTERATRAASDAHPAFEPPVPERARRDATCAEHRASTPNARASASNAAASPTPAPD
CCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHH
ALAQHFKTAMRRLTSTVSIVATRDACARYGMAATAVSALSTEPPAILVCINRAATLHAPL
HHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHH
MRVRRFSLNLLHERQLELIAPFSGKLDHDARFAHGEWRDAYGVPMLAGAQATLWCAVDGD
HHHHHHHHHHHHHHHHHEECCCCCCCCCCCEECCCCCCCCCCCCEEECCCEEEEEEECCC
FSYGSHTIVIGRVDSVSTAGPVAPLLWQDGAPCAARALAPCLHDAQ
CCCCCEEEEEECCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
ASPWTERATRAASDAHPAFEPPVPERARRDATCAEHRASTPNARASASNAAASPTPAPD
CCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHH
ALAQHFKTAMRRLTSTVSIVATRDACARYGMAATAVSALSTEPPAILVCINRAATLHAPL
HHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHH
MRVRRFSLNLLHERQLELIAPFSGKLDHDARFAHGEWRDAYGVPMLAGAQATLWCAVDGD
HHHHHHHHHHHHHHHHHEECCCCCCCCCCCEECCCCCCCCCCCCEEECCCEEEEEEECCC
FSYGSHTIVIGRVDSVSTAGPVAPLLWQDGAPCAARALAPCLHDAQ
CCCCCEEEEEECCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA