Click here to switch to the map view.

The map label for this gene is ybfB [H]

Identifier: 126447608

GI number: 126447608

Start: 2222829

End: 2224082

Strand: Reverse

Name: ybfB [H]

Synonym: BMA10247_A2293

Alternate gene names: 126447608

Gene position: 2224082-2222829 (Counterclockwise)

Preceding gene: 126446122

Following gene: 262192885

Centisome position: 94.53

GC content: 69.46

Gene sequence:

>1254_bases
ATGTTTGCACCCGAAACGCATCGACGCGACGGATCCCCACGTTTTTTCAATCCGATGATGATCGCCGTGGTCGCCGGCGC
GCTCGTGATGAGCGCGGCAATGGGCGTGCGGCAAACCTTCGGCCTTTTCATCGGGCCATTCTCGTTCGACCACGGTTTGC
CGGTGACGACGATCGCGTTCGCGATCGCGCTGCACAACCTCGTCTGGGGCGCCGCGCAGCCGTTCGCCGGCGCGGCCGCC
GACCGCTACGGCGCCGGGCCGCTCGTCGCGATCGGCGCGGTCGTGTTCGCGCTCGGCCTCGCGATCGCCGCGGTCGTGCC
GACGGGCCCGATGCTCGTGCTCGGCATAGGCGTGCTCGTCGGCATCGGGATCAGCTGCACGAGTTTCGGCGTGGTGCTGA
CCGCGGTCGGCCGCGGCGCGCCTGCCGAGAAGCGCAGCATGGCGATGGGCATCGCGAGCGCGGGCGGCTCGCTCGGCCAG
GTGGCGCTCGTGCCGATCGCGCAGTGGTTCACGTCGCATTCGGGCACGATGGTGTCGCTGTTCGTGCTGGCCGGCTGCAT
GATCGCGATCGCGCCGCTCGGCGTGCTGCTCGACAAGAACACGCGCGGCAGCCACGTGGTCGCGCACGAGACGGCGACGA
TATCGCTGAAGGAGACGCTGTCGTACGCGGTGCGGCATCGCGGCTATTGCCTGCTGACGCTCGGCTTCTTCACCTGCGGG
TTCCAGCTCGCGTTCATCGGCACGCACTTGCCGAACTATCTGCTGCTCTGCCACATGCCGGCCGGGCTCGGCGCGACCGC
GCTCGCGCTGATCGGCCTGTTCAACATGGCGGGCAGCTGGGCGTGCGGCTGGCTCGGCGGGCGCTACCGGCAGCAGCACG
TGCTCGGCTGGCTGTACCTGATTCGCGGCGCGGCGATCGCGCTGTTCTTCCTCGGGCCGAAGTCGAATGCGTCGGTCGTC
GTCTTCGCGGCGATCATGGGGCTCACGTGGCTCGGCACCGTGCCGCTCACGAGCGGGCTCGTCGCGAAGGTGTTCGGCAC
GCGGCATCTGGGCACGCTGTTCGGCGTGTGCTTCCTGAGCCATCAGGTCGGCTCGTTCCTCGGCTCGTGGCTCGGCGGCT
ACGTGTTCGACGCGACGGGATCGTACTCGCTGATCTGGGGCGCGACGGCGCTCGCCGGGCTGTTCGCGGCACTGCTGCAT
TTCCCGATCAACGACGCGCCCGCGCATGGCGGCGCGGCCGTCGCGCGGGCTTGA

Upstream 100 bases:

>100_bases
GCGCACCGTGCGATCGAGGATGCGACGCCGTATCGACTAAAACGAATCGCGCTGCCCGCGTCGCGCTCGCGCCGCGGCTA
GCGTCATAACAGGAGCGGAC

Downstream 100 bases:

>100_bases
CGACGCCGGGCGGCGCGCGCGGATGCGCGCCGGGCATGGCGGGTTACGCGGCGCGGCCGGCGCCGCGCGACCGACATGAA
GGACGAGCCGGGCTGCGCGC

Product: major facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MFAPETHRRDGSPRFFNPMMIAVVAGALVMSAAMGVRQTFGLFIGPFSFDHGLPVTTIAFAIALHNLVWGAAQPFAGAAA
DRYGAGPLVAIGAVVFALGLAIAAVVPTGPMLVLGIGVLVGIGISCTSFGVVLTAVGRGAPAEKRSMAMGIASAGGSLGQ
VALVPIAQWFTSHSGTMVSLFVLAGCMIAIAPLGVLLDKNTRGSHVVAHETATISLKETLSYAVRHRGYCLLTLGFFTCG
FQLAFIGTHLPNYLLLCHMPAGLGATALALIGLFNMAGSWACGWLGGRYRQQHVLGWLYLIRGAAIALFFLGPKSNASVV
VFAAIMGLTWLGTVPLTSGLVAKVFGTRHLGTLFGVCFLSHQVGSFLGSWLGGYVFDATGSYSLIWGATALAGLFAALLH
FPINDAPAHGGAAVARA

Sequences:

>Translated_417_residues
MFAPETHRRDGSPRFFNPMMIAVVAGALVMSAAMGVRQTFGLFIGPFSFDHGLPVTTIAFAIALHNLVWGAAQPFAGAAA
DRYGAGPLVAIGAVVFALGLAIAAVVPTGPMLVLGIGVLVGIGISCTSFGVVLTAVGRGAPAEKRSMAMGIASAGGSLGQ
VALVPIAQWFTSHSGTMVSLFVLAGCMIAIAPLGVLLDKNTRGSHVVAHETATISLKETLSYAVRHRGYCLLTLGFFTCG
FQLAFIGTHLPNYLLLCHMPAGLGATALALIGLFNMAGSWACGWLGGRYRQQHVLGWLYLIRGAAIALFFLGPKSNASVV
VFAAIMGLTWLGTVPLTSGLVAKVFGTRHLGTLFGVCFLSHQVGSFLGSWLGGYVFDATGSYSLIWGATALAGLFAALLH
FPINDAPAHGGAAVARA
>Mature_417_residues
MFAPETHRRDGSPRFFNPMMIAVVAGALVMSAAMGVRQTFGLFIGPFSFDHGLPVTTIAFAIALHNLVWGAAQPFAGAAA
DRYGAGPLVAIGAVVFALGLAIAAVVPTGPMLVLGIGVLVGIGISCTSFGVVLTAVGRGAPAEKRSMAMGIASAGGSLGQ
VALVPIAQWFTSHSGTMVSLFVLAGCMIAIAPLGVLLDKNTRGSHVVAHETATISLKETLSYAVRHRGYCLLTLGFFTCG
FQLAFIGTHLPNYLLLCHMPAGLGATALALIGLFNMAGSWACGWLGGRYRQQHVLGWLYLIRGAAIALFFLGPKSNASVV
VFAAIMGLTWLGTVPLTSGLVAKVFGTRHLGTLFGVCFLSHQVGSFLGSWLGGYVFDATGSYSLIWGATALAGLFAALLH
FPINDAPAHGGAAVARA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Homo sapiens, GI42475555, Length=373, Percent_Identity=25.201072386059, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI1789969, Length=361, Percent_Identity=23.5457063711911, Blast_Score=68, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43075; Mature: 43075

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAPETHRRDGSPRFFNPMMIAVVAGALVMSAAMGVRQTFGLFIGPFSFDHGLPVTTIAF
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHH
AIALHNLVWGAAQPFAGAAADRYGAGPLVAIGAVVFALGLAIAAVVPTGPMLVLGIGVLV
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
GIGISCTSFGVVLTAVGRGAPAEKRSMAMGIASAGGSLGQVALVPIAQWFTSHSGTMVSL
HCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHH
FVLAGCMIAIAPLGVLLDKNTRGSHVVAHETATISLKETLSYAVRHRGYCLLTLGFFTCG
HHHHHHHHHHHHHHHEEECCCCCCEEEEECCEEEEHHHHHHHHHHHCCEEEEEEHHHHHH
FQLAFIGTHLPNYLLLCHMPAGLGATALALIGLFNMAGSWACGWLGGRYRQQHVLGWLYL
HHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHH
IRGAAIALFFLGPKSNASVVVFAAIMGLTWLGTVPLTSGLVAKVFGTRHLGTLFGVCFLS
HHHHHEEEEEECCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
HQVGSFLGSWLGGYVFDATGSYSLIWGATALAGLFAALLHFPINDAPAHGGAAVARA
HHHHHHHHHHHCCEEEECCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCC
>Mature Secondary Structure
MFAPETHRRDGSPRFFNPMMIAVVAGALVMSAAMGVRQTFGLFIGPFSFDHGLPVTTIAF
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHH
AIALHNLVWGAAQPFAGAAADRYGAGPLVAIGAVVFALGLAIAAVVPTGPMLVLGIGVLV
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
GIGISCTSFGVVLTAVGRGAPAEKRSMAMGIASAGGSLGQVALVPIAQWFTSHSGTMVSL
HCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHH
FVLAGCMIAIAPLGVLLDKNTRGSHVVAHETATISLKETLSYAVRHRGYCLLTLGFFTCG
HHHHHHHHHHHHHHHEEECCCCCCEEEEECCEEEEHHHHHHHHHHHCCEEEEEEHHHHHH
FQLAFIGTHLPNYLLLCHMPAGLGATALALIGLFNMAGSWACGWLGGRYRQQHVLGWLYL
HHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHH
IRGAAIALFFLGPKSNASVVVFAAIMGLTWLGTVPLTSGLVAKVFGTRHLGTLFGVCFLS
HHHHHEEEEEECCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
HQVGSFLGSWLGGYVFDATGSYSLIWGATALAGLFAALLHFPINDAPAHGGAAVARA
HHHHHHHHHHHCCEEEECCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]