| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126445943
Identifier: 126445943
GI number: 126445943
Start: 253773
End: 254339
Strand: Reverse
Name: 126445943
Synonym: BMA10247_A0290
Alternate gene names: NA
Gene position: 254339-253773 (Counterclockwise)
Preceding gene: 126447844
Following gene: 126446184
Centisome position: 10.81
GC content: 68.96
Gene sequence:
>567_bases ATGAAGGTCGCGATCGCGACCGTGCTCGGCAGCCTGGCGCTCGCAGGCTGCACCACCACGCCCGACAAGCCGGCGAACGC ATCGTCCAATGCGTCGACGCGCGAAGCGATCGATGCGCGCGTGAACGCGACGCTGTCGCGCCTCTACTCGACGGTGCCGG GCTCGCGCGAACTCGTCTCGAAATCCCGCGGCGTGCTCGTGTTCCCGAACGTGCTGCAGGCGGGCTTCATCGTCGGCGGC CAGAGCGGCAACGGCGCGCTGCGCGTGGGCGGCTCCACGCTCGGCTACTACAACACGTCGTCGCTGTCGGTGGGCCTGCA GGCGGGCGCGCAATCGAAGGCGCTGATCTTCCTGTTCATGTCGCAGGACGCGCTCGACAAGTTCCGCAACTCGGACGGCT GGGCCGCGGGCGCCGACGCGTCGGTCGCGCTCGTCAAGGTCGGGGCGAACGGCGCGGTCGATACGTCGACGGTGACCGCG CCGGTCGAAGTCATCGTGCTGACCAACGCCGGCCTGATGGGCGATCTGTCGGTCAACGGCACGAAGGTCACGCGCCTGAA GCTCTGA
Upstream 100 bases:
>100_bases GTTCGCGGCAGGCATCCTCCTTGCGCGTCGATAAGCGCGGCACTCACGCCCGATGTTCAACCATCAAGACGGAGGAAGCA TCATGCGCAAGACTCTCGTT
Downstream 100 bases:
>100_bases GCCGCACCACCGACGCGGGCGGCGCCGCGCCTCGCGCGTGCGCGCCGCCCGCGCCGCGCGCCGCGGCAGCCCGCCGCGGC GTTTTCGATCGCAGCCCGAA
Product: putative lipoprotein
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MKVAIATVLGSLALAGCTTTPDKPANASSNASTREAIDARVNATLSRLYSTVPGSRELVSKSRGVLVFPNVLQAGFIVGG QSGNGALRVGGSTLGYYNTSSLSVGLQAGAQSKALIFLFMSQDALDKFRNSDGWAAGADASVALVKVGANGAVDTSTVTA PVEVIVLTNAGLMGDLSVNGTKVTRLKL
Sequences:
>Translated_188_residues MKVAIATVLGSLALAGCTTTPDKPANASSNASTREAIDARVNATLSRLYSTVPGSRELVSKSRGVLVFPNVLQAGFIVGG QSGNGALRVGGSTLGYYNTSSLSVGLQAGAQSKALIFLFMSQDALDKFRNSDGWAAGADASVALVKVGANGAVDTSTVTA PVEVIVLTNAGLMGDLSVNGTKVTRLKL >Mature_188_residues MKVAIATVLGSLALAGCTTTPDKPANASSNASTREAIDARVNATLSRLYSTVPGSRELVSKSRGVLVFPNVLQAGFIVGG QSGNGALRVGGSTLGYYNTSSLSVGLQAGAQSKALIFLFMSQDALDKFRNSDGWAAGADASVALVKVGANGAVDTSTVTA PVEVIVLTNAGLMGDLSVNGTKVTRLKL
Specific function: Unknown
COG id: COG2930
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19034; Mature: 19034
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVAIATVLGSLALAGCTTTPDKPANASSNASTREAIDARVNATLSRLYSTVPGSRELVS CEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH KSRGVLVFPNVLQAGFIVGGQSGNGALRVGGSTLGYYNTSSLSVGLQAGAQSKALIFLFM CCCCEEEECCHHCCCEEEECCCCCCEEEECCCEECEEECCCEEEEEECCCCCCEEEEEEE SQDALDKFRNSDGWAAGADASVALVKVGANGAVDTSTVTAPVEVIVLTNAGLMGDLSVNG CCHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCEEECCEEEEEEECCCEEEEEECCC TKVTRLKL EEEEEEEC >Mature Secondary Structure MKVAIATVLGSLALAGCTTTPDKPANASSNASTREAIDARVNATLSRLYSTVPGSRELVS CEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH KSRGVLVFPNVLQAGFIVGGQSGNGALRVGGSTLGYYNTSSLSVGLQAGAQSKALIFLFM CCCCEEEECCHHCCCEEEECCCCCCEEEECCCEECEEECCCEEEEEECCCCCCEEEEEEE SQDALDKFRNSDGWAAGADASVALVKVGANGAVDTSTVTAPVEVIVLTNAGLMGDLSVNG CCHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCEEECCEEEEEEECCCEEEEEECCC TKVTRLKL EEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA