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The map label for this gene is ydiK [C]

Identifier: 126446184

GI number: 126446184

Start: 252487

End: 253545

Strand: Reverse

Name: ydiK [C]

Synonym: BMA10247_A0289

Alternate gene names: 126446184

Gene position: 253545-252487 (Counterclockwise)

Preceding gene: 126445943

Following gene: 126447662

Centisome position: 10.78

GC content: 64.21

Gene sequence:

>1059_bases
ATGGATAGCGGGAACGATCACCAAAAATTCTTCCACCTGTTGCTTCTCGTCGTCACCGTCGGTCTTTGCTGGATATTGAC
GCCGTTCTTCGGCGCGATCTTCTGGGGGACCATTCTCGCGATCCTGTTCCAGCCCGTGCAGCGCTGGCTCGCCGCACGCT
TCGGCAAGCGCCGCAATCTCGCCGCGCTCGTCACGCTGTCGCTCATCATCCTGATCGTGATCCTGCCGCTTGCGTTCGTG
ACCGCGACACTCGTGCAGGAGATCGCGTACGCGTATCAGCAGATCAAGACGATGCAGCCGAACATGACGCAGTACTTCCA
GGAGTTCATGCACGCGCTGCCGAGCTCCGTGCATCGCGTGCTGCACAATTACGGGCTCACCGACATCGCCGGCATCCAGA
AGAAGCTGACCGACGGCGCGGCCGCGATCAGCCAGTTCGTGGCCGCGCAGGCGCTCAGCATCGGGCAGAACACGTTCCAG
TTCGTCGTGAGCTTCGGCGTGATGCTGTACCTCGTGTTCTTCCTGTTGCGCGACGGCGGCGAGATCGGCCGCCGCGTGCG
GCGCGCGCTGCCGCTCGACGAAGAGCACAAGCAGCATCTGCTGACGAAGTTCACGACGGTCGTGCGCGCGACCGTCAAGG
GCAACATCGCGGTCGCGGCCGTGCAGGGCGCGCTCGGCGGCCTGATCTTCTGGATTCTCGGGATCGAGGGCGTGATTCTG
TGGGGCGCGCTGATGGCGTTCCTGTCGCTGCTGCCCGCGATCGGCGCGGGGCTCGTATGGGTGCCGGCCGCCGGCTATTT
CGCGGTGACCGGGCAAATCTGGAAATGCGTGATTCTCGTCGCGTTCTGCGTGGGCGTGATCGGGCTCGTCGATAACCTGC
TGCGGCCGATCCTCGTCGGCAAGGACACGAAGATGCCCGACTGGGTCGTGCTGATCTCGACGCTCGGCGGCATGGCGCTG
TTCGGCATCAACGGCTTCGTGATCGGCCCGCTCGTCGCCGCGCTGTTCATGGCGAGCTGGGACATCTTCGCGCGCACCGA
GCAGACCGACTGGGAATGA

Upstream 100 bases:

>100_bases
ACGCGCGCCGCGCGCGACGCGTCAGGCATAATCGATGCGTCACGGCGGGCCGCCGCGGCGCGGCTTGCCCGTCCGATCAA
CCATCCTCCCCGAGCACACC

Downstream 100 bases:

>100_bases
CGCGCCGCCGGCGCGCGTTCGTCCGGACATTCCATTAAAAAACCCGGCTTTCAAGCCGGTTTTTTTTGCGTTCGGCCCGG
CGCGATCCGCCCGGGCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MDSGNDHQKFFHLLLLVVTVGLCWILTPFFGAIFWGTILAILFQPVQRWLAARFGKRRNLAALVTLSLIILIVILPLAFV
TATLVQEIAYAYQQIKTMQPNMTQYFQEFMHALPSSVHRVLHNYGLTDIAGIQKKLTDGAAAISQFVAAQALSIGQNTFQ
FVVSFGVMLYLVFFLLRDGGEIGRRVRRALPLDEEHKQHLLTKFTTVVRATVKGNIAVAAVQGALGGLIFWILGIEGVIL
WGALMAFLSLLPAIGAGLVWVPAAGYFAVTGQIWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWVVLISTLGGMAL
FGINGFVIGPLVAALFMASWDIFARTEQTDWE

Sequences:

>Translated_352_residues
MDSGNDHQKFFHLLLLVVTVGLCWILTPFFGAIFWGTILAILFQPVQRWLAARFGKRRNLAALVTLSLIILIVILPLAFV
TATLVQEIAYAYQQIKTMQPNMTQYFQEFMHALPSSVHRVLHNYGLTDIAGIQKKLTDGAAAISQFVAAQALSIGQNTFQ
FVVSFGVMLYLVFFLLRDGGEIGRRVRRALPLDEEHKQHLLTKFTTVVRATVKGNIAVAAVQGALGGLIFWILGIEGVIL
WGALMAFLSLLPAIGAGLVWVPAAGYFAVTGQIWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWVVLISTLGGMAL
FGINGFVIGPLVAALFMASWDIFARTEQTDWE
>Mature_352_residues
MDSGNDHQKFFHLLLLVVTVGLCWILTPFFGAIFWGTILAILFQPVQRWLAARFGKRRNLAALVTLSLIILIVILPLAFV
TATLVQEIAYAYQQIKTMQPNMTQYFQEFMHALPSSVHRVLHNYGLTDIAGIQKKLTDGAAAISQFVAAQALSIGQNTFQ
FVVSFGVMLYLVFFLLRDGGEIGRRVRRALPLDEEHKQHLLTKFTTVVRATVKGNIAVAAVQGALGGLIFWILGIEGVIL
WGALMAFLSLLPAIGAGLVWVPAAGYFAVTGQIWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWVVLISTLGGMAL
FGINGFVIGPLVAALFMASWDIFARTEQTDWE

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=345, Percent_Identity=28.1159420289855, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 38661; Mature: 38661

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure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CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]