| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is braC [H]
Identifier: 126445864
GI number: 126445864
Start: 1704354
End: 1705496
Strand: Reverse
Name: braC [H]
Synonym: BMA10247_A1769
Alternate gene names: 126445864
Gene position: 1705496-1704354 (Counterclockwise)
Preceding gene: 126447448
Following gene: 126446384
Centisome position: 72.49
GC content: 65.44
Gene sequence:
>1143_bases GTGAAAAGGAAAATCAACAGACTGTTGCCGATCAGCGCGGCCGCGATGGTGATGGCCGCGGCCTCGACGCATGCGCTCGC CGATCAGGTCGTGAAGATCGGCAGTGCCGAGCCCTTGACGGGCGGCATCGCCCACCTCGGCAAGGACAACGAGAACGGCG CGCGTCTCGCGGTCGAGGAGATCAATGCGAAGGGCCTCACGATCGGCGGCCAGAAGGTCACGCTCCAGCTCGACGCGCAG GACGACGCGGCCGACCCGCGCACCGCGACGCAGGTCGCGCAGAAGCTCGTCGACGGCAAGGTCGTCGCGGTGATCGGCCA CCTGAATTCGGGAACGTCGATTCCGGCCTCGAAGATCTACAGCGATGCCGGCATCCTGCAGATCTCGCCGTCGGCGACGA ACCCGGCCTACACGCAACAAGGCTTCAAGACGACCTACCGCGTCGTCGCGACCGACGCGCAGCAAGGCCCGGCGCTCGCC GACTACGCGAAGCAGAAGGGCATCAAGACGGTGGCCGTCGTCGACGATTCGACGGCCTACGGCCAGGGCCTCGCGAACGA ATTCGAGAAGAAGGCGAAGGCGCTCGGCCTGAAGGTGGTGTCGCACGACGCGACCAACGACAAGGCGGTCGATTTCCGCG CGATCCTGACGAAGATCAAGGGTACGAACCCGGACGCGATCATGTACGGCGGCATGGACGCGACGGGCGGCCCGTTCGCG AAGCAGGCGAAGCAGCTCGGCCTGCGCGCGAAGATCTTCGCGGGCGACGGCGTGTGCACCGAGCAGTTGCCGGCGCTCGC CGGCAACGCGGCCGAGAACGTCGTGTGCTCGCAGGCGGGCGCGGCGCTCGAGAAGATGCCGGGCGGCGCGACGTTCCAGG CCAAGTACGAGAAGCGCTTCAACCAGCCGATCCGCTTCGACGCGCCGTTCACGTATGACGCGGTGTACATCATCGTCGAC GCGATGAAGCGCGCGAACTCGACGGACCCGGCGAAGATCCTCGCGGTGATGCCGAAGACGAACTACACCGGCGTGATCGG CACGACGGTCTTCGATTCGAAGGGTGACCTGAAGCACGGCGTGATTTCGCTGTACGACTTCAAGGGCGGCAAGAAGACCT TCCTCGATCAGGTGACGATGTAA
Upstream 100 bases:
>100_bases GCAGCCTGCGAACGAACCGGCGCACGCGGCGCGCTGCAACGAATTTTGAACGGGTATCATCCGATCATATGATCTACGCC CGTTCAACAAGGAGACTGCA
Downstream 100 bases:
>100_bases GCGCGACGGGCGGCGTTTGCCGCTCATTGCGCCGATCGATGCGACGGGCGGACGCCGGATTGGGCGTCCGCCCGTTTTGT TGTCCGTTTGGTTATCCGTT
Product: putative amino acid ABC transporter, periplasmic amino acid-binding protein
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: LIVAT-BP; Leu/Ile/Val/Thr/Ala-binding protein [H]
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MKRKINRLLPISAAAMVMAAASTHALADQVVKIGSAEPLTGGIAHLGKDNENGARLAVEEINAKGLTIGGQKVTLQLDAQ DDAADPRTATQVAQKLVDGKVVAVIGHLNSGTSIPASKIYSDAGILQISPSATNPAYTQQGFKTTYRVVATDAQQGPALA DYAKQKGIKTVAVVDDSTAYGQGLANEFEKKAKALGLKVVSHDATNDKAVDFRAILTKIKGTNPDAIMYGGMDATGGPFA KQAKQLGLRAKIFAGDGVCTEQLPALAGNAAENVVCSQAGAALEKMPGGATFQAKYEKRFNQPIRFDAPFTYDAVYIIVD AMKRANSTDPAKILAVMPKTNYTGVIGTTVFDSKGDLKHGVISLYDFKGGKKTFLDQVTM
Sequences:
>Translated_380_residues MKRKINRLLPISAAAMVMAAASTHALADQVVKIGSAEPLTGGIAHLGKDNENGARLAVEEINAKGLTIGGQKVTLQLDAQ DDAADPRTATQVAQKLVDGKVVAVIGHLNSGTSIPASKIYSDAGILQISPSATNPAYTQQGFKTTYRVVATDAQQGPALA DYAKQKGIKTVAVVDDSTAYGQGLANEFEKKAKALGLKVVSHDATNDKAVDFRAILTKIKGTNPDAIMYGGMDATGGPFA KQAKQLGLRAKIFAGDGVCTEQLPALAGNAAENVVCSQAGAALEKMPGGATFQAKYEKRFNQPIRFDAPFTYDAVYIIVD AMKRANSTDPAKILAVMPKTNYTGVIGTTVFDSKGDLKHGVISLYDFKGGKKTFLDQVTM >Mature_380_residues MKRKINRLLPISAAAMVMAAASTHALADQVVKIGSAEPLTGGIAHLGKDNENGARLAVEEINAKGLTIGGQKVTLQLDAQ DDAADPRTATQVAQKLVDGKVVAVIGHLNSGTSIPASKIYSDAGILQISPSATNPAYTQQGFKTTYRVVATDAQQGPALA DYAKQKGIKTVAVVDDSTAYGQGLANEFEKKAKALGLKVVSHDATNDKAVDFRAILTKIKGTNPDAIMYGGMDATGGPFA KQAKQLGLRAKIFAGDGVCTEQLPALAGNAAENVVCSQAGAALEKMPGGATFQAKYEKRFNQPIRFDAPFTYDAVYIIVD AMKRANSTDPAKILAVMPKTNYTGVIGTTVFDSKGDLKHGVISLYDFKGGKKTFLDQVTM
Specific function: Component of the high-affinity leucine, isoleucine, valine transport system I (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=359, Percent_Identity=33.983286908078, Blast_Score=180, Evalue=1e-46, Organism=Escherichia coli, GI48994941, Length=355, Percent_Identity=32.3943661971831, Blast_Score=162, Evalue=3e-41,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 39922; Mature: 39922
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKINRLLPISAAAMVMAAASTHALADQVVKIGSAEPLTGGIAHLGKDNENGARLAVEE CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCEEEEEE INAKGLTIGGQKVTLQLDAQDDAADPRTATQVAQKLVDGKVVAVIGHLNSGTSIPASKIY CCCCCEEECCEEEEEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHH SDAGILQISPSATNPAYTQQGFKTTYRVVATDAQQGPALADYAKQKGIKTVAVVDDSTAY CCCCEEEECCCCCCCCHHHHCCCEEEEEEEECCCCCCHHHHHHHHCCCEEEEEEECCCHH GQGLANEFEKKAKALGLKVVSHDATNDKAVDFRAILTKIKGTNPDAIMYGGMDATGGPFA CCHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHH KQAKQLGLRAKIFAGDGVCTEQLPALAGNAAENVVCSQAGAALEKMPGGATFQAKYEKRF HHHHHCCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHCHHHHHCCCCCEEEEHHHHHC NQPIRFDAPFTYDAVYIIVDAMKRANSTDPAKILAVMPKTNYTGVIGTTVFDSKGDLKHG CCCEEECCCCCCCHHHHEEHHHHHCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCC VISLYDFKGGKKTFLDQVTM EEEEEECCCCCHHHHHHCCC >Mature Secondary Structure MKRKINRLLPISAAAMVMAAASTHALADQVVKIGSAEPLTGGIAHLGKDNENGARLAVEE CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCEEEEEE INAKGLTIGGQKVTLQLDAQDDAADPRTATQVAQKLVDGKVVAVIGHLNSGTSIPASKIY CCCCCEEECCEEEEEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHH SDAGILQISPSATNPAYTQQGFKTTYRVVATDAQQGPALADYAKQKGIKTVAVVDDSTAY CCCCEEEECCCCCCCCHHHHCCCEEEEEEEECCCCCCHHHHHHHHCCCEEEEEEECCCHH GQGLANEFEKKAKALGLKVVSHDATNDKAVDFRAILTKIKGTNPDAIMYGGMDATGGPFA CCHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHH KQAKQLGLRAKIFAGDGVCTEQLPALAGNAAENVVCSQAGAALEKMPGGATFQAKYEKRF HHHHHCCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHCHHHHHCCCCCEEEEHHHHHC NQPIRFDAPFTYDAVYIIVDAMKRANSTDPAKILAVMPKTNYTGVIGTTVFDSKGDLKHG CCCEEECCCCCCCHHHHEEHHHHHCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCC VISLYDFKGGKKTFLDQVTM EEEEEECCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2509433; 2120183; 10984043 [H]