| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
Click here to switch to the map view.
The map label for this gene is 126445699
Identifier: 126445699
GI number: 126445699
Start: 89359
End: 90642
Strand: Reverse
Name: 126445699
Synonym: BMA10247_A0106
Alternate gene names: NA
Gene position: 90642-89359 (Counterclockwise)
Preceding gene: 126447160
Following gene: 126446199
Centisome position: 3.85
GC content: 67.29
Gene sequence:
>1284_bases ATGCAATCCACGCTCGATACCGTCGCGAACGCGCAGGAACGACCACCGCGTTCGGCGACGCCATTCTCGATCGGCCTCGC CGGCATCGCCGCGGGGCTTCTCACGCTGTGGGCGTCGCGCGGCGCGGCCGCGCTGACGGGCACCGAGCGCAGCCTGCTCG CGTGCGCGGCGATCATCGCGACGATCGGCGCATACGAGCTGTTCGTCGCGCGCGTCCATCTGCGGCCGAGTGCCGGCCTC GCGAATCGCGCGTTGCGCCCGCTCAGCGTCGCGCGCGTGTCGCTGCGGCTCGCGGCGCTCGCATCGGTCTACGCGGGCAT CGCGCTCGTCTACTGGCTGCTGCCCGAGTATCACGGCGCGTTCTATCAACCGTTCTGGTCGCTCGTGGGCATGCTCGCGC CGTACGTCGCGCTCGCCGCGCCGTTCTATTTCGGCTGGATGGACCGGCGCATGCGCGACGTCGACGACGCGTATCTGTGC TGGGGCCGGTGGCTGTTGCGCGGGCAGCGTCCGGCCGATTGGCGGCCGATCCGCGAGATGCTCGCCGGCTGGGCCGTGAA GGCGTTCTTCCTGCCGCTGATGATCGTCTATCTGTCGACGGACGCCGATCACATCGGCGCGTCGTTCGCGAGCGCCGCCA GCGCGCCGTTCTCGCTCGCGACGTTCCGCTTCATGTACGACCTGTCGTACACGATGGACCTGATGTTCGGCGCGCTCGGC TATCTGTGCACGTTCCGCCTGCTCGATTCGCACGTGCGCAGCACGGAGCCGACCACGCTCGGCTGGCTCGCCGCGCTGAT CTGCTATCAGCCGTTCTGGTCGCTGATCGGAAACAACTACATTCACTACGAAGGCTCGATGTTCTGGGACAACTGGCTGC TGTCGGTGCCCGCGATCCGCTTCGCGTGGGGCGTGGTCATCGTCGCGCTGCTGCTCTGCTATGCGCTGTCGACGATCTCG TTCGGGCTGCGCTTCTCGAACCTGACGAACCGCGGCATCATCACGTCCGGCCCATACCGGTTCACGAAGCACCCCGCGTA TCTCGCGAAGAACCTGTCGTACTGGATGATCTCGGTGCCGTTCGTCGAGCCGCTCGGATGGCGCCTCGCGATCATGCATT CGGCGGCGCTCGTCGCCGTGAACCTGCTGTACTGGCTGCGCGCGAAAACCGAGGAGCGGCATCTGATGCGCGATCCCGAC TATCGTGCGTACGCCGAATGGATCGCGCGGCACGGGATGTTCGCGAGGCTCGGGCGCATGCTTGGTCGGGAACGGCGCGC GTGA
Upstream 100 bases:
>100_bases GGGCAAGTAGCGCGCAGGCAAGCCGAACGGCGCGGCGGCCGGGCCCAACCATTCCACATGCCCGGCCGCCCGCCGTCCAT GTCATGACACGGGGGATGAC
Downstream 100 bases:
>100_bases TGCCGCGGTCCGTCTCACGACTCACGACTCACGACTCACGACTCACGACTCACGACTCACGACGCGGGGCACGACGCGGG GCACGACGAGGGCGAACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Protein-S-Isoprenylcysteine Methyltransferase
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MQSTLDTVANAQERPPRSATPFSIGLAGIAAGLLTLWASRGAAALTGTERSLLACAAIIATIGAYELFVARVHLRPSAGL ANRALRPLSVARVSLRLAALASVYAGIALVYWLLPEYHGAFYQPFWSLVGMLAPYVALAAPFYFGWMDRRMRDVDDAYLC WGRWLLRGQRPADWRPIREMLAGWAVKAFFLPLMIVYLSTDADHIGASFASAASAPFSLATFRFMYDLSYTMDLMFGALG YLCTFRLLDSHVRSTEPTTLGWLAALICYQPFWSLIGNNYIHYEGSMFWDNWLLSVPAIRFAWGVVIVALLLCYALSTIS FGLRFSNLTNRGIITSGPYRFTKHPAYLAKNLSYWMISVPFVEPLGWRLAIMHSAALVAVNLLYWLRAKTEERHLMRDPD YRAYAEWIARHGMFARLGRMLGRERRA
Sequences:
>Translated_427_residues MQSTLDTVANAQERPPRSATPFSIGLAGIAAGLLTLWASRGAAALTGTERSLLACAAIIATIGAYELFVARVHLRPSAGL ANRALRPLSVARVSLRLAALASVYAGIALVYWLLPEYHGAFYQPFWSLVGMLAPYVALAAPFYFGWMDRRMRDVDDAYLC WGRWLLRGQRPADWRPIREMLAGWAVKAFFLPLMIVYLSTDADHIGASFASAASAPFSLATFRFMYDLSYTMDLMFGALG YLCTFRLLDSHVRSTEPTTLGWLAALICYQPFWSLIGNNYIHYEGSMFWDNWLLSVPAIRFAWGVVIVALLLCYALSTIS FGLRFSNLTNRGIITSGPYRFTKHPAYLAKNLSYWMISVPFVEPLGWRLAIMHSAALVAVNLLYWLRAKTEERHLMRDPD YRAYAEWIARHGMFARLGRMLGRERRA >Mature_427_residues MQSTLDTVANAQERPPRSATPFSIGLAGIAAGLLTLWASRGAAALTGTERSLLACAAIIATIGAYELFVARVHLRPSAGL ANRALRPLSVARVSLRLAALASVYAGIALVYWLLPEYHGAFYQPFWSLVGMLAPYVALAAPFYFGWMDRRMRDVDDAYLC WGRWLLRGQRPADWRPIREMLAGWAVKAFFLPLMIVYLSTDADHIGASFASAASAPFSLATFRFMYDLSYTMDLMFGALG YLCTFRLLDSHVRSTEPTTLGWLAALICYQPFWSLIGNNYIHYEGSMFWDNWLLSVPAIRFAWGVVIVALLLCYALSTIS FGLRFSNLTNRGIITSGPYRFTKHPAYLAKNLSYWMISVPFVEPLGWRLAIMHSAALVAVNLLYWLRAKTEERHLMRDPD YRAYAEWIARHGMFARLGRMLGRERRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48047; Mature: 48047
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSTLDTVANAQERPPRSATPFSIGLAGIAAGLLTLWASRGAAALTGTERSLLACAAIIA CCCHHHHHHCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHH TIGAYELFVARVHLRPSAGLANRALRPLSVARVSLRLAALASVYAGIALVYWLLPEYHGA HHHHHHHHHHHHEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH FYQPFWSLVGMLAPYVALAAPFYFGWMDRRMRDVDDAYLCWGRWLLRGQRPADWRPIREM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHH LAGWAVKAFFLPLMIVYLSTDADHIGASFASAASAPFSLATFRFMYDLSYTMDLMFGALG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH YLCTFRLLDSHVRSTEPTTLGWLAALICYQPFWSLIGNNYIHYEGSMFWDNWLLSVPAIR HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCEEHHHHHHHHHHHH FAWGVVIVALLLCYALSTISFGLRFSNLTNRGIITSGPYRFTKHPAYLAKNLSYWMISVP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHCCCCEEEEECC FVEPLGWRLAIMHSAALVAVNLLYWLRAKTEERHLMRDPDYRAYAEWIARHGMFARLGRM CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCHHHHHHHH LGRERRA HHHCCCC >Mature Secondary Structure MQSTLDTVANAQERPPRSATPFSIGLAGIAAGLLTLWASRGAAALTGTERSLLACAAIIA CCCHHHHHHCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHH TIGAYELFVARVHLRPSAGLANRALRPLSVARVSLRLAALASVYAGIALVYWLLPEYHGA HHHHHHHHHHHHEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH FYQPFWSLVGMLAPYVALAAPFYFGWMDRRMRDVDDAYLCWGRWLLRGQRPADWRPIREM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHH LAGWAVKAFFLPLMIVYLSTDADHIGASFASAASAPFSLATFRFMYDLSYTMDLMFGALG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH YLCTFRLLDSHVRSTEPTTLGWLAALICYQPFWSLIGNNYIHYEGSMFWDNWLLSVPAIR HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCEEHHHHHHHHHHHH FAWGVVIVALLLCYALSTISFGLRFSNLTNRGIITSGPYRFTKHPAYLAKNLSYWMISVP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHCCCCEEEEECC FVEPLGWRLAIMHSAALVAVNLLYWLRAKTEERHLMRDPDYRAYAEWIARHGMFARLGRM CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCHHHHHHHH LGRERRA HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA