Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

Click here to switch to the map view.

The map label for this gene is 126446199

Identifier: 126446199

GI number: 126446199

Start: 88820

End: 89359

Strand: Reverse

Name: 126446199

Synonym: BMA10247_A0105

Alternate gene names: NA

Gene position: 89359-88820 (Counterclockwise)

Preceding gene: 126445699

Following gene: 126447371

Centisome position: 3.8

GC content: 72.78

Gene sequence:

>540_bases
ATGCCGCGGTCCGTCTCACGACTCACGACTCACGACTCACGACTCACGACTCACGACTCACGACGCGGGGCACGACGCGG
GGCACGACGAGGGCGAACGCCGGCGTTCCGCCGCCTGCCGGCCGCGCACGCGCGCGGCGTCGCCGGACGACGCGCAATCG
GCCGGGCACGCACGCGGTCTGGCCGGGCACGCACTGAGCGGCGTCGAAGCCGACGCATGCGCGCCGCACACTTCGAAGCG
GCGGCATGGCGAGATTGCCTGTCCGGAAAACCGGCAAGCTTACCCTTTCTGACATTCGCGCGACCGGCGCACACGAAACG
CCGGTACACCGAAGCGTCATCACGCCGTCACGGCGCCGCGCCGCCCGCGCGCCTGCCGACGCCGCCCGCCTGGCTTCGCC
CCGCGAACGGTCGCACACGCGACGCGTCCGCGCCACCCCGCTCGCGCGGCCTTCCGCCAAGCGCCCGCCGCCTCCCATCG
CCTTCCCCTATTTTTACCGCCGTCGACGCCGATTCCCCGCTTCCCGCGCGATCCGCATAG

Upstream 100 bases:

>100_bases
TGATGCGCGATCCCGACTATCGTGCGTACGCCGAATGGATCGCGCGGCACGGGATGTTCGCGAGGCTCGGGCGCATGCTT
GGTCGGGAACGGCGCGCGTG

Downstream 100 bases:

>100_bases
TGTGGGCTGTCGTACTTTCCCGGCCCGACGGCAACGCTATCCTTCGACGCAGATGCATGGCTCGCGCGTCGATCCGTGCC
CGACGCCGTCGCCCACGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MPRSVSRLTTHDSRLTTHDSRRGARRGARRGRTPAFRRLPAAHARGVAGRRAIGRARTRSGRARTERRRSRRMRAAHFEA
AAWRDCLSGKPASLPFLTFARPAHTKRRYTEASSRRHGAAPPARLPTPPAWLRPANGRTRDASAPPRSRGLPPSARRLPS
PSPIFTAVDADSPLPARSA

Sequences:

>Translated_179_residues
MPRSVSRLTTHDSRLTTHDSRRGARRGARRGRTPAFRRLPAAHARGVAGRRAIGRARTRSGRARTERRRSRRMRAAHFEA
AAWRDCLSGKPASLPFLTFARPAHTKRRYTEASSRRHGAAPPARLPTPPAWLRPANGRTRDASAPPRSRGLPPSARRLPS
PSPIFTAVDADSPLPARSA
>Mature_178_residues
PRSVSRLTTHDSRLTTHDSRRGARRGARRGRTPAFRRLPAAHARGVAGRRAIGRARTRSGRARTERRRSRRMRAAHFEAA
AWRDCLSGKPASLPFLTFARPAHTKRRYTEASSRRHGAAPPARLPTPPAWLRPANGRTRDASAPPRSRGLPPSARRLPSP
SPIFTAVDADSPLPARSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19764; Mature: 19633

Theoretical pI: Translated: 12.88; Mature: 12.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRSVSRLTTHDSRLTTHDSRRGARRGARRGRTPAFRRLPAAHARGVAGRRAIGRARTRS
CCCCCCHHHHCCCHHCCCHHHHHHHHHHHCCCCHHHHHCCHHHHHCCHHHHHHHHHHHCC
GRARTERRRSRRMRAAHFEAAAWRDCLSGKPASLPFLTFARPAHTKRRYTEASSRRHGAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
PPARLPTPPAWLRPANGRTRDASAPPRSRGLPPSARRLPSPSPIFTAVDADSPLPARSA
CCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure 
PRSVSRLTTHDSRLTTHDSRRGARRGARRGRTPAFRRLPAAHARGVAGRRAIGRARTRS
CCCCCHHHHCCCHHCCCHHHHHHHHHHHCCCCHHHHHCCHHHHHCCHHHHHHHHHHHCC
GRARTERRRSRRMRAAHFEAAAWRDCLSGKPASLPFLTFARPAHTKRRYTEASSRRHGAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
PPARLPTPPAWLRPANGRTRDASAPPRSRGLPPSARRLPSPSPIFTAVDADSPLPARSA
CCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA