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The map label for this gene is 126445604

Identifier: 126445604

GI number: 126445604

Start: 1766818

End: 1767972

Strand: Reverse

Name: 126445604

Synonym: BMA10247_A1836

Alternate gene names: NA

Gene position: 1767972-1766818 (Counterclockwise)

Preceding gene: 126445948

Following gene: 126447462

Centisome position: 75.15

GC content: 65.63

Gene sequence:

>1155_bases
GTGAAAAACATCCGGTTTGCATGCGCAACCGCAGGGGTTCTGGCCGCGACGGCCGCACACGCGCAGAGCTCGGTCACGTT
GTACGGCCTGATCGACACGGGCATCATGTACACGAACAACGTCGCGAGCGGCAATTCGCACGGCGGGCTCGTGCAGGCGA
CGACGGGCGCCGTGAACGGCAGCCGCTTCGGCGTGCGCGGCACCGAGGATCTCGGCGGCGGCCTGAAGGCGCTGTTCGTG
CTGGAGAACGGCTTCAATGCCGAGAACGGCAAGCTCGGGCAGGACGGCCGGCTGTTCGGCCGTTTCGCGTATGTCGGGCT
GTCCGACAATCGTTTCGGCACCCTGACGATCGGCCGGCAATACGATTCGCTCGTCGATTTCGTCGCGCCGCTGTCGGCGA
CGGCCGGCACGTTCGGCGACGCGAGCTTCGCGCATCCGTTCGACAACGACAACCTGAACCACTCGTTGCGGATCAACAAC
GCGATCAAGTACACGAGCAACACATACGCGGGCCTGAAGTTCGGCGGCATGTACGCGATGTCGAACAGCACCGATTTCGC
GACGAACCGCGCGTACAGTTTCGGCGCGAGCTATACGCGCGGGCCGCTGAACGTCGCGGCCGGCTATCTGCAGATCAACG
GCTCGAAGGGCACGACGGCGGGCAGCCCGGGCGCGGTCGACATCGTCGAGTCGGCGGCGAACGGCAAGGGGGGCTTCTCG
CTCGGCGCGGACCGGATGCGCTCGTACGGCGGCGGCCTGAACTACGCGTTCGGCCCGGCGACGCTCGGCTTCGTCTACAC
GCGCGCCGAATACGAGAACACCGCGTCGTTCGGCTCGACGGGCGGCACGGTGCGCTTTAACAACTACGAACTGAACGGCA
AGTACCAGCTCACGCCCGCGTTCAGCGTCGGCGGCGCATACACGTATACGGACGGCCACGTCGAGAACACCGTCAAATAC
GGTTCCGATCCGAAGTGGCACCAGGTCGACCTGATGGCGGTATACCGCTTGTCGGTGCGCACCGACGTCTATCTCGAAGG
GATGTACCAGCACGCATCGGGCCGCAATTACGTCGCGATGATCAACACCGCGGGCGGCGCGTCGTCCACCGGCAACCAGG
TCGTCGCCGCGGTCGGCCTGCGCACGCGCTTCTGA

Upstream 100 bases:

>100_bases
AAGCGCTGCACGCCGGGCCGCAGATCCGCGGCGGGCGAATCCCTAAACTCGACCATCGTCGGATCGAGTCGTTTCATTTC
CATCAACAAGGAGTTTCGTT

Downstream 100 bases:

>100_bases
CGGGCGCGGCGCCGCATCGCGCGCTGCCGGGGACAGAGCCCGAATTTACGGCTTGACATCGCGCGCGGCGTTGACGAGAG
TGACCGTTCGTCCGTGTCGA

Product: putative outer membrane porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MKNIRFACATAGVLAATAAHAQSSVTLYGLIDTGIMYTNNVASGNSHGGLVQATTGAVNGSRFGVRGTEDLGGGLKALFV
LENGFNAENGKLGQDGRLFGRFAYVGLSDNRFGTLTIGRQYDSLVDFVAPLSATAGTFGDASFAHPFDNDNLNHSLRINN
AIKYTSNTYAGLKFGGMYAMSNSTDFATNRAYSFGASYTRGPLNVAAGYLQINGSKGTTAGSPGAVDIVESAANGKGGFS
LGADRMRSYGGGLNYAFGPATLGFVYTRAEYENTASFGSTGGTVRFNNYELNGKYQLTPAFSVGGAYTYTDGHVENTVKY
GSDPKWHQVDLMAVYRLSVRTDVYLEGMYQHASGRNYVAMINTAGGASSTGNQVVAAVGLRTRF

Sequences:

>Translated_384_residues
MKNIRFACATAGVLAATAAHAQSSVTLYGLIDTGIMYTNNVASGNSHGGLVQATTGAVNGSRFGVRGTEDLGGGLKALFV
LENGFNAENGKLGQDGRLFGRFAYVGLSDNRFGTLTIGRQYDSLVDFVAPLSATAGTFGDASFAHPFDNDNLNHSLRINN
AIKYTSNTYAGLKFGGMYAMSNSTDFATNRAYSFGASYTRGPLNVAAGYLQINGSKGTTAGSPGAVDIVESAANGKGGFS
LGADRMRSYGGGLNYAFGPATLGFVYTRAEYENTASFGSTGGTVRFNNYELNGKYQLTPAFSVGGAYTYTDGHVENTVKY
GSDPKWHQVDLMAVYRLSVRTDVYLEGMYQHASGRNYVAMINTAGGASSTGNQVVAAVGLRTRF
>Mature_384_residues
MKNIRFACATAGVLAATAAHAQSSVTLYGLIDTGIMYTNNVASGNSHGGLVQATTGAVNGSRFGVRGTEDLGGGLKALFV
LENGFNAENGKLGQDGRLFGRFAYVGLSDNRFGTLTIGRQYDSLVDFVAPLSATAGTFGDASFAHPFDNDNLNHSLRINN
AIKYTSNTYAGLKFGGMYAMSNSTDFATNRAYSFGASYTRGPLNVAAGYLQINGSKGTTAGSPGAVDIVESAANGKGGFS
LGADRMRSYGGGLNYAFGPATLGFVYTRAEYENTASFGSTGGTVRFNNYELNGKYQLTPAFSVGGAYTYTDGHVENTVKY
GSDPKWHQVDLMAVYRLSVRTDVYLEGMYQHASGRNYVAMINTAGGASSTGNQVVAAVGLRTRF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 40387; Mature: 40387

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIRFACATAGVLAATAAHAQSSVTLYGLIDTGIMYTNNVASGNSHGGLVQATTGAVNG
CCCCEEEEHHHHHHHHHHHHCCCCEEEEEEEECCEEEECCCCCCCCCCCEEEEECCCCCC
SRFGVRGTEDLGGGLKALFVLENGFNAENGKLGQDGRLFGRFAYVGLSDNRFGTLTIGRQ
CEECCCCCHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCC
YDSLVDFVAPLSATAGTFGDASFAHPFDNDNLNHSLRINNAIKYTSNTYAGLKFGGMYAM
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCEEEECCCCCCCEEECCEEEE
SNSTDFATNRAYSFGASYTRGPLNVAAGYLQINGSKGTTAGSPGAVDIVESAANGKGGFS
CCCCCCCCCCEEECCCCCCCCCHHEEEEEEEEECCCCCCCCCCCCCCEEHHCCCCCCCCC
LGADRMRSYGGGLNYAFGPATLGFVYTRAEYENTASFGSTGGTVRFNNYELNGKYQLTPA
CCHHHHHHHCCCCCEEECCCEEEEEEEECCCCCCCCCCCCCCEEEECCEEECCEEEEEEE
FSVGGAYTYTDGHVENTVKYGSDPKWHQVDLMAVYRLSVRTDVYLEGMYQHASGRNYVAM
EECCCEEEEECCCCCCCEECCCCCCEEEEEEEEEEEEEECCEEEEEEEEHHCCCCEEEEE
INTAGGASSTGNQVVAAVGLRTRF
EECCCCCCCCCCEEEEEEEEECCC
>Mature Secondary Structure
MKNIRFACATAGVLAATAAHAQSSVTLYGLIDTGIMYTNNVASGNSHGGLVQATTGAVNG
CCCCEEEEHHHHHHHHHHHHCCCCEEEEEEEECCEEEECCCCCCCCCCCEEEEECCCCCC
SRFGVRGTEDLGGGLKALFVLENGFNAENGKLGQDGRLFGRFAYVGLSDNRFGTLTIGRQ
CEECCCCCHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCC
YDSLVDFVAPLSATAGTFGDASFAHPFDNDNLNHSLRINNAIKYTSNTYAGLKFGGMYAM
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCEEEECCCCCCCEEECCEEEE
SNSTDFATNRAYSFGASYTRGPLNVAAGYLQINGSKGTTAGSPGAVDIVESAANGKGGFS
CCCCCCCCCCEEECCCCCCCCCHHEEEEEEEEECCCCCCCCCCCCCCEEHHCCCCCCCCC
LGADRMRSYGGGLNYAFGPATLGFVYTRAEYENTASFGSTGGTVRFNNYELNGKYQLTPA
CCHHHHHHHCCCCCEEECCCEEEEEEEECCCCCCCCCCCCCCEEEECCEEECCEEEEEEE
FSVGGAYTYTDGHVENTVKYGSDPKWHQVDLMAVYRLSVRTDVYLEGMYQHASGRNYVAM
EECCCEEEEECCCCCCCEECCCCCCEEEEEEEEEEEEEECCEEEEEEEEHHCCCCEEEEE
INTAGGASSTGNQVVAAVGLRTRF
EECCCCCCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]