| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126455426
Identifier: 126455426
GI number: 126455426
Start: 1499833
End: 1500435
Strand: Reverse
Name: 126455426
Synonym: BURPS1106A_1547
Alternate gene names: NA
Gene position: 1500435-1499833 (Counterclockwise)
Preceding gene: 126454151
Following gene: 126451995
Centisome position: 37.62
GC content: 56.88
Gene sequence:
>603_bases TTGCGATACGAGAACTGGATGCTCAAAGGAGACAACCAGGAAGACGCGACTAGGTACCACGTCTATGACGCTGCCGGCAT CGCTACACCAGCGGCGCTCGCCGTACTTCGAGAGGAGTTTCGCAACAGCAAAGACTTCACCTACGTAGCAATGTGGGATG GCAATCTCGCTAGCGACAACGGCGCGTCCATATCGTGCCACGTCGGTGATAAATCCCTTCCTGACACATTGACTCTTCGC ATCGAGGGCGAACGGTGGAAAGCCTACGCGGCCATTTCCGGAATCGTATCGACAATGGTCACTATATTCAGCCCGGCACT CGTCGAGGTGAGTTTCGACGAGTATGCTGTAAAACAGGTCTTCGACGACAAGCCCGGCGTCGGCTGGATGCTCTACCTGC CGAAGGTCATTACGCAACAGCAAGTTCCGGAAGCCCGAGCGCTGATTCCCGTACCCGCCAAAGGCAAGCAAACCGGCACG ATCATCATCAGCGTCACGGACGCCCCGTTCTCGGTCGACAATCCCGAGCACGTCGCGATCGCGAATCGCATCGAGATCCG GCTCGTCGATCAAGACTTGCTCCCCGCCTACGTCGATATCTGA
Upstream 100 bases:
>100_bases CGCCAGTTTCCGCGATGCTTCACTCGTCGCATTCGATTTTCCCGAGATCTTGACGCGGATATCGAAAATCATCGACGCGC TGAAGGCGCACGACGACTCT
Downstream 100 bases:
>100_bases AGCTGAACCCGCCGGCGCGATTACCGCGCCGGCCGCACGCGTCCAAACAATCCGACTGGCTCCGCCGAGTCGCCCCAACT AAAAGTAATCCGCTCGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MRYENWMLKGDNQEDATRYHVYDAAGIATPAALAVLREEFRNSKDFTYVAMWDGNLASDNGASISCHVGDKSLPDTLTLR IEGERWKAYAAISGIVSTMVTIFSPALVEVSFDEYAVKQVFDDKPGVGWMLYLPKVITQQQVPEARALIPVPAKGKQTGT IIISVTDAPFSVDNPEHVAIANRIEIRLVDQDLLPAYVDI
Sequences:
>Translated_200_residues MRYENWMLKGDNQEDATRYHVYDAAGIATPAALAVLREEFRNSKDFTYVAMWDGNLASDNGASISCHVGDKSLPDTLTLR IEGERWKAYAAISGIVSTMVTIFSPALVEVSFDEYAVKQVFDDKPGVGWMLYLPKVITQQQVPEARALIPVPAKGKQTGT IIISVTDAPFSVDNPEHVAIANRIEIRLVDQDLLPAYVDI >Mature_200_residues MRYENWMLKGDNQEDATRYHVYDAAGIATPAALAVLREEFRNSKDFTYVAMWDGNLASDNGASISCHVGDKSLPDTLTLR IEGERWKAYAAISGIVSTMVTIFSPALVEVSFDEYAVKQVFDDKPGVGWMLYLPKVITQQQVPEARALIPVPAKGKQTGT IIISVTDAPFSVDNPEHVAIANRIEIRLVDQDLLPAYVDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22133; Mature: 22133
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYENWMLKGDNQEDATRYHVYDAAGIATPAALAVLREEFRNSKDFTYVAMWDGNLASDN CCCCCEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC GASISCHVGDKSLPDTLTLRIEGERWKAYAAISGIVSTMVTIFSPALVEVSFDEYAVKQV CCEEEEEECCCCCCCEEEEEEECCCEEHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHH FDDKPGVGWMLYLPKVITQQQVPEARALIPVPAKGKQTGTIIISVTDAPFSVDNPEHVAI HCCCCCCEEEEEHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEE ANRIEIRLVDQDLLPAYVDI EEEEEEEEECCCCCCHHHCC >Mature Secondary Structure MRYENWMLKGDNQEDATRYHVYDAAGIATPAALAVLREEFRNSKDFTYVAMWDGNLASDN CCCCCEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC GASISCHVGDKSLPDTLTLRIEGERWKAYAAISGIVSTMVTIFSPALVEVSFDEYAVKQV CCEEEEEECCCCCCCEEEEEEECCCEEHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHH FDDKPGVGWMLYLPKVITQQQVPEARALIPVPAKGKQTGTIIISVTDAPFSVDNPEHVAI HCCCCCCEEEEEHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEE ANRIEIRLVDQDLLPAYVDI EEEEEEEEECCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA