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The map label for this gene is 126455412

Identifier: 126455412

GI number: 126455412

Start: 3195007

End: 3195849

Strand: Reverse

Name: 126455412

Synonym: BURPS1106A_3280

Alternate gene names: NA

Gene position: 3195849-3195007 (Counterclockwise)

Preceding gene: 126453714

Following gene: 126451998

Centisome position: 80.13

GC content: 57.53

Gene sequence:

>843_bases
ATGAAGGTATTTCTGGTGGGCAGCACGGGCTACATCGGCAAGACATTGTTCGATGCATGCAGCCGGCGCTGGAGAACGCT
GGGAACTTCGACGCGCGATGGCGCCGACATCGTTTTCTCGTTGGCCCGCGCCGAGGCGTTTCCATACGAACAAGTGAGCG
CGGGAGACGTTGTTGCAGTCGCCGCGGCCATATCGTCTCCGGACGCGTGTGCAAAGGATTATGAGACGGCATTCCAGGTG
AATGTGACGGGCACCTTGACACTGATCCGCGGCGTAGTGGCTCGAGGCGCACGTGTCATTTTTTTCTCCAGCGATACGGT
CTACGGGGCTAGCGAGCAGTTGCTGAGCGAGGAAGCCGAACTGACGCCGGCCGGCGCTTATGGCGCGATGAAGCGCCGGG
TGGAGGCCGAGCTCGGCGAGAATGCGGCCGTCAAGGTGATTCGGCTTTCCTACGTGTTCTCGCTCCGTGATCGATTTACT
CAGTATTTGCTCGGTTGTGCGAAGGAAGGGAAGCGGGCCGACATATTCAAGCCTTTTTCGCGCTGTGTCGTGTACTTGAG
CGACGTCGTGGAGGGGGTTGTTTCGCTGATCGAGCGCTGGGATGCGATCGACGAGCGAGTGATCAATTTCGTTGGGCCGG
AGCTGGTCGCTCGCGAAGATTTCGTCGAAAAGATCAGAAATCTGGCAGCGCCGGAGCTGGATTATGGATTCAGCGAGCCC
GAGGGCGATTTCTTCGTCAATCGACCTCGTATCATTAATGTAAGTTCTGCTCGTTTCGAGAAACTGCTGGGGCGGCGCCC
CCGCAGTCTTGGCGAAGCGATTAATCTCGAGTTGTCTAATTAA

Upstream 100 bases:

>100_bases
GGTTTGAGCGCTCGCCGAAGGCCGACGTTTCCGCGTTCTTCGATCGTGTCGCCGCAAATCGTCGCTGGGTTCGAACGGCG
TTGCGCAGGGCTTTTGAATC

Downstream 100 bases:

>100_bases
CGGTGCGATATGGCAAAGCGTGTTTTGATTACGGGTATTACGGGGATGGTGGGGTCGCATCTGGCCGACTTTCTGCTGGA
GAATACGGATTGGGAAATCT

Product: NAD-dependent epimerase/dehydratase family protein

Products: NA

Alternate protein names: Capsular Polysaccharide Biosynthesis Protein

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKVFLVGSTGYIGKTLFDACSRRWRTLGTSTRDGADIVFSLARAEAFPYEQVSAGDVVAVAAAISSPDACAKDYETAFQV
NVTGTLTLIRGVVARGARVIFFSSDTVYGASEQLLSEEAELTPAGAYGAMKRRVEAELGENAAVKVIRLSYVFSLRDRFT
QYLLGCAKEGKRADIFKPFSRCVVYLSDVVEGVVSLIERWDAIDERVINFVGPELVAREDFVEKIRNLAAPELDYGFSEP
EGDFFVNRPRIINVSSARFEKLLGRRPRSLGEAINLELSN

Sequences:

>Translated_280_residues
MKVFLVGSTGYIGKTLFDACSRRWRTLGTSTRDGADIVFSLARAEAFPYEQVSAGDVVAVAAAISSPDACAKDYETAFQV
NVTGTLTLIRGVVARGARVIFFSSDTVYGASEQLLSEEAELTPAGAYGAMKRRVEAELGENAAVKVIRLSYVFSLRDRFT
QYLLGCAKEGKRADIFKPFSRCVVYLSDVVEGVVSLIERWDAIDERVINFVGPELVAREDFVEKIRNLAAPELDYGFSEP
EGDFFVNRPRIINVSSARFEKLLGRRPRSLGEAINLELSN
>Mature_280_residues
MKVFLVGSTGYIGKTLFDACSRRWRTLGTSTRDGADIVFSLARAEAFPYEQVSAGDVVAVAAAISSPDACAKDYETAFQV
NVTGTLTLIRGVVARGARVIFFSSDTVYGASEQLLSEEAELTPAGAYGAMKRRVEAELGENAAVKVIRLSYVFSLRDRFT
QYLLGCAKEGKRADIFKPFSRCVVYLSDVVEGVVSLIERWDAIDERVINFVGPELVAREDFVEKIRNLAAPELDYGFSEP
EGDFFVNRPRIINVSSARFEKLLGRRPRSLGEAINLELSN

Specific function: Unknown

COG id: COG1091

COG function: function code M; dTDP-4-dehydrorhamnose reductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30836; Mature: 30836

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVFLVGSTGYIGKTLFDACSRRWRTLGTSTRDGADIVFSLARAEAFPYEQVSAGDVVAV
CEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHH
AAAISSPDACAKDYETAFQVNVTGTLTLIRGVVARGARVIFFSSDTVYGASEQLLSEEAE
HHHHCCCHHHHHHCCCEEEEECHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHC
LTPAGAYGAMKRRVEAELGENAAVKVIRLSYVFSLRDRFTQYLLGCAKEGKRADIFKPFS
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
RCVVYLSDVVEGVVSLIERWDAIDERVINFVGPELVAREDFVEKIRNLAAPELDYGFSEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
EGDFFVNRPRIINVSSARFEKLLGRRPRSLGEAINLELSN
CCCEEECCCEEEECCHHHHHHHHCCCCHHHCCEEEEEECC
>Mature Secondary Structure
MKVFLVGSTGYIGKTLFDACSRRWRTLGTSTRDGADIVFSLARAEAFPYEQVSAGDVVAV
CEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHH
AAAISSPDACAKDYETAFQVNVTGTLTLIRGVVARGARVIFFSSDTVYGASEQLLSEEAE
HHHHCCCHHHHHHCCCEEEEECHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHC
LTPAGAYGAMKRRVEAELGENAAVKVIRLSYVFSLRDRFTQYLLGCAKEGKRADIFKPFS
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
RCVVYLSDVVEGVVSLIERWDAIDERVINFVGPELVAREDFVEKIRNLAAPELDYGFSEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
EGDFFVNRPRIINVSSARFEKLLGRRPRSLGEAINLELSN
CCCEEECCCEEEECCHHHHHHHHCCCCHHHCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA