| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453714
Identifier: 126453714
GI number: 126453714
Start: 3195846
End: 3196508
Strand: Reverse
Name: 126453714
Synonym: BURPS1106A_3281
Alternate gene names: NA
Gene position: 3196508-3195846 (Counterclockwise)
Preceding gene: 126453077
Following gene: 126455412
Centisome position: 80.14
GC content: 52.19
Gene sequence:
>663_bases TTGTCGGTGCAATACATGCATTGGGAAGGCTATCATCCCACCGTCAATTCACCATACGGTCTGCCGCCGCATCCGGAAGG TTATGTTGATGCCTTGATCGCGGGAGCCGTCGTCATGGATGTGGACAAGGAAACCTATCTCCGGCACTTGGAGGAGATCG GCGCGTCTCTACGCATCGATATCGACGAGATCGAAAGCTGGTGCGTCGACGAGCTGAAGTCTCGGGAAGTCGGTGAAAAC GACGGTGGGAAGCAGATCGACATTTCCGTTACCGATTTTATTTTGGCTAACTGTCGTCAGAAGCGACTGTTCTACACGAT GAATCATCCGACCGCGGCATTGATGCGCGAAATCGCGGCACGATGCATGCTGGCGCTCGGCTATACCTATTCGGATATCA GCTTTGATCAGAATCTCGATCCTCTGGATGTGACCAAGATGTCCTTGTATCCGATATATCGAGATTGCTTCGATTTTTCA GAATTGAACAGGATGAACGAGTATCAGGTGCTTTACAAGAAGAAGGCCTACGAACCGTATCTCCTGGAGCAGTTCGAGTG GTTTGAGCGCTCGCCGAAGGCCGACGTTTCCGCGTTCTTCGATCGTGTCGCCGCAAATCGTCGCTGGGTTCGAACGGCGT TGCGCAGGGCTTTTGAATCATGA
Upstream 100 bases:
>100_bases GCTCGATCTATTTCTTTATCAACCTGTCTCGGAGGGGTACCGAGGAGAAAAGTACTCGTCGGTATTTCTGAGGAATAGCA TGCCGCCGGGAGGGAGCGCC
Downstream 100 bases:
>100_bases AGGTATTTCTGGTGGGCAGCACGGGCTACATCGGCAAGACATTGTTCGATGCATGCAGCCGGCGCTGGAGAACGCTGGGA ACTTCGACGCGCGATGGCGC
Product: capsular polysaccharide biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MSVQYMHWEGYHPTVNSPYGLPPHPEGYVDALIAGAVVMDVDKETYLRHLEEIGASLRIDIDEIESWCVDELKSREVGEN DGGKQIDISVTDFILANCRQKRLFYTMNHPTAALMREIAARCMLALGYTYSDISFDQNLDPLDVTKMSLYPIYRDCFDFS ELNRMNEYQVLYKKKAYEPYLLEQFEWFERSPKADVSAFFDRVAANRRWVRTALRRAFES
Sequences:
>Translated_220_residues MSVQYMHWEGYHPTVNSPYGLPPHPEGYVDALIAGAVVMDVDKETYLRHLEEIGASLRIDIDEIESWCVDELKSREVGEN DGGKQIDISVTDFILANCRQKRLFYTMNHPTAALMREIAARCMLALGYTYSDISFDQNLDPLDVTKMSLYPIYRDCFDFS ELNRMNEYQVLYKKKAYEPYLLEQFEWFERSPKADVSAFFDRVAANRRWVRTALRRAFES >Mature_219_residues SVQYMHWEGYHPTVNSPYGLPPHPEGYVDALIAGAVVMDVDKETYLRHLEEIGASLRIDIDEIESWCVDELKSREVGEND GGKQIDISVTDFILANCRQKRLFYTMNHPTAALMREIAARCMLALGYTYSDISFDQNLDPLDVTKMSLYPIYRDCFDFSE LNRMNEYQVLYKKKAYEPYLLEQFEWFERSPKADVSAFFDRVAANRRWVRTALRRAFES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25698; Mature: 25567
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVQYMHWEGYHPTVNSPYGLPPHPEGYVDALIAGAVVMDVDKETYLRHLEEIGASLRID CCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCHHHHHHHHHHCCCCEEEE IDEIESWCVDELKSREVGENDGGKQIDISVTDFILANCRQKRLFYTMNHPTAALMREIAA HHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHH RCMLALGYTYSDISFDQNLDPLDVTKMSLYPIYRDCFDFSELNRMNEYQVLYKKKAYEPY HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCH LLEQFEWFERSPKADVSAFFDRVAANRRWVRTALRRAFES HHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure SVQYMHWEGYHPTVNSPYGLPPHPEGYVDALIAGAVVMDVDKETYLRHLEEIGASLRID CCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCHHHHHHHHHHCCCCEEEE IDEIESWCVDELKSREVGENDGGKQIDISVTDFILANCRQKRLFYTMNHPTAALMREIAA HHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHH RCMLALGYTYSDISFDQNLDPLDVTKMSLYPIYRDCFDFSELNRMNEYQVLYKKKAYEPY HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCH LLEQFEWFERSPKADVSAFFDRVAANRRWVRTALRRAFES HHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA