Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is 126453714

Identifier: 126453714

GI number: 126453714

Start: 3195846

End: 3196508

Strand: Reverse

Name: 126453714

Synonym: BURPS1106A_3281

Alternate gene names: NA

Gene position: 3196508-3195846 (Counterclockwise)

Preceding gene: 126453077

Following gene: 126455412

Centisome position: 80.14

GC content: 52.19

Gene sequence:

>663_bases
TTGTCGGTGCAATACATGCATTGGGAAGGCTATCATCCCACCGTCAATTCACCATACGGTCTGCCGCCGCATCCGGAAGG
TTATGTTGATGCCTTGATCGCGGGAGCCGTCGTCATGGATGTGGACAAGGAAACCTATCTCCGGCACTTGGAGGAGATCG
GCGCGTCTCTACGCATCGATATCGACGAGATCGAAAGCTGGTGCGTCGACGAGCTGAAGTCTCGGGAAGTCGGTGAAAAC
GACGGTGGGAAGCAGATCGACATTTCCGTTACCGATTTTATTTTGGCTAACTGTCGTCAGAAGCGACTGTTCTACACGAT
GAATCATCCGACCGCGGCATTGATGCGCGAAATCGCGGCACGATGCATGCTGGCGCTCGGCTATACCTATTCGGATATCA
GCTTTGATCAGAATCTCGATCCTCTGGATGTGACCAAGATGTCCTTGTATCCGATATATCGAGATTGCTTCGATTTTTCA
GAATTGAACAGGATGAACGAGTATCAGGTGCTTTACAAGAAGAAGGCCTACGAACCGTATCTCCTGGAGCAGTTCGAGTG
GTTTGAGCGCTCGCCGAAGGCCGACGTTTCCGCGTTCTTCGATCGTGTCGCCGCAAATCGTCGCTGGGTTCGAACGGCGT
TGCGCAGGGCTTTTGAATCATGA

Upstream 100 bases:

>100_bases
GCTCGATCTATTTCTTTATCAACCTGTCTCGGAGGGGTACCGAGGAGAAAAGTACTCGTCGGTATTTCTGAGGAATAGCA
TGCCGCCGGGAGGGAGCGCC

Downstream 100 bases:

>100_bases
AGGTATTTCTGGTGGGCAGCACGGGCTACATCGGCAAGACATTGTTCGATGCATGCAGCCGGCGCTGGAGAACGCTGGGA
ACTTCGACGCGCGATGGCGC

Product: capsular polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MSVQYMHWEGYHPTVNSPYGLPPHPEGYVDALIAGAVVMDVDKETYLRHLEEIGASLRIDIDEIESWCVDELKSREVGEN
DGGKQIDISVTDFILANCRQKRLFYTMNHPTAALMREIAARCMLALGYTYSDISFDQNLDPLDVTKMSLYPIYRDCFDFS
ELNRMNEYQVLYKKKAYEPYLLEQFEWFERSPKADVSAFFDRVAANRRWVRTALRRAFES

Sequences:

>Translated_220_residues
MSVQYMHWEGYHPTVNSPYGLPPHPEGYVDALIAGAVVMDVDKETYLRHLEEIGASLRIDIDEIESWCVDELKSREVGEN
DGGKQIDISVTDFILANCRQKRLFYTMNHPTAALMREIAARCMLALGYTYSDISFDQNLDPLDVTKMSLYPIYRDCFDFS
ELNRMNEYQVLYKKKAYEPYLLEQFEWFERSPKADVSAFFDRVAANRRWVRTALRRAFES
>Mature_219_residues
SVQYMHWEGYHPTVNSPYGLPPHPEGYVDALIAGAVVMDVDKETYLRHLEEIGASLRIDIDEIESWCVDELKSREVGEND
GGKQIDISVTDFILANCRQKRLFYTMNHPTAALMREIAARCMLALGYTYSDISFDQNLDPLDVTKMSLYPIYRDCFDFSE
LNRMNEYQVLYKKKAYEPYLLEQFEWFERSPKADVSAFFDRVAANRRWVRTALRRAFES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25698; Mature: 25567

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVQYMHWEGYHPTVNSPYGLPPHPEGYVDALIAGAVVMDVDKETYLRHLEEIGASLRID
CCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCHHHHHHHHHHCCCCEEEE
IDEIESWCVDELKSREVGENDGGKQIDISVTDFILANCRQKRLFYTMNHPTAALMREIAA
HHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHH
RCMLALGYTYSDISFDQNLDPLDVTKMSLYPIYRDCFDFSELNRMNEYQVLYKKKAYEPY
HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCH
LLEQFEWFERSPKADVSAFFDRVAANRRWVRTALRRAFES
HHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SVQYMHWEGYHPTVNSPYGLPPHPEGYVDALIAGAVVMDVDKETYLRHLEEIGASLRID
CCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCHHHHHHHHHHCCCCEEEE
IDEIESWCVDELKSREVGENDGGKQIDISVTDFILANCRQKRLFYTMNHPTAALMREIAA
HHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHH
RCMLALGYTYSDISFDQNLDPLDVTKMSLYPIYRDCFDFSELNRMNEYQVLYKKKAYEPY
HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCH
LLEQFEWFERSPKADVSAFFDRVAANRRWVRTALRRAFES
HHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA