| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126455369
Identifier: 126455369
GI number: 126455369
Start: 2769899
End: 2770963
Strand: Reverse
Name: 126455369
Synonym: BURPS1106A_2811
Alternate gene names: NA
Gene position: 2770963-2769899 (Counterclockwise)
Preceding gene: 126451582
Following gene: 126454234
Centisome position: 69.47
GC content: 66.1
Gene sequence:
>1065_bases ATGCGAATCGCTCAAATCGCTCCGTTGCACGAAGCGGTTCCCCCGAAACTGTACGGCGGTACCGAACGGGTGGTGTCCTA TCTGACCGAGGCGCTCGTCGAGATGGGACATGACGTCACGCTCTTCGCGAGCGGCGATTCGCAGACCAGCGCGAAGCTCG AGGCCGTGTGGCCGCAGGCGCTGCGCCTCGATCCGACCATCCGCGACGTGATGGCGCCGCACATGCTGCTGCTCGAGGAA GTGCGCCGCCGCGCGGACGAGTTCGACGTGCTGCACTTTCACATCGACTACTATCCGTTCCCGCTGTTCTCGCGCCAGCC GGTGCCGCATCTGACGACGCTGCACGGCCGCCTCGACCTGCCGGAGCTGCAGCCGATCTTCAACACGTTCAGCGACGTGC CCGTCGTGTCGATCTCCGACAACCAGCGCATTCCGCTGTCGCAGGCCAACTGGCTGCAGACGACCTACCACGGCCTGCCC GAGAACCTGCTCAAGCCGATCCCGGACGTGAAGCCGAGCTACCTCGCGTTCCTCGGCCGCATCTCGCCGGAAAAGCGCGT CGACACCGCGATCCGCATCGCCGAGCAGGCCGGCATGCCGATCAAGATCGCCGCGAAGCTCGACAAGGCCGATCGCGCGT ACTACGAAGAAAAGATCAAGCCGCTCTTCTCGCTGCCGCACGTCGAGTACATCGGCGAGATCAGCGAAGCCGAGAAGGCC GACTTCCTCGGCAACGCGCACGCGCTGCTGTTCCCGATCGACTGGCCGGAGCCGTTCGGCCTGGTGATGATCGAGGCGAT GGCGTGCGGCACGCCGGTGATCGCGTTCAAGCGCGGCTCGGTGCCCGAAGTGATCGAGAACGGCGTGTCGGGCTTCGTCG TCGAGGACGAGCTGTCGGCCGTCGCCGCCGTCAAGCGCCTGAACACGCTGCCGCGCGAGCGGGTGCGCGCCGCGTTCGAC GCGCGTTTCACGTCGAAGGTGATGGCGCAGAACTACGTGAAGGGTTACGAGGAGCTGCTGCGCCGCAAGCGCCGCACGGT GCTGCGCGAAGTCAACGCGGGCTGA
Upstream 100 bases:
>100_bases AGCCGGCTCGCCCGACGTCCAACCGACGTTCGCGGCGGCGTTCGGCAGGCGGGCGATCGACCCGCTGCTTTACTTTTTGC CGATTTTTTAGGAGTTACAC
Downstream 100 bases:
>100_bases CGCGCCGCGCTCTCGAGCGCCGCGTCCTGTTTTCGCGCGATGCCCCGCCCGGGCCGACCGGGCGGGGCATTTTGCATTCG GCGGCGGGTTTGGCGGGCCG
Product: glycosyl transferase, group 1 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MRIAQIAPLHEAVPPKLYGGTERVVSYLTEALVEMGHDVTLFASGDSQTSAKLEAVWPQALRLDPTIRDVMAPHMLLLEE VRRRADEFDVLHFHIDYYPFPLFSRQPVPHLTTLHGRLDLPELQPIFNTFSDVPVVSISDNQRIPLSQANWLQTTYHGLP ENLLKPIPDVKPSYLAFLGRISPEKRVDTAIRIAEQAGMPIKIAAKLDKADRAYYEEKIKPLFSLPHVEYIGEISEAEKA DFLGNAHALLFPIDWPEPFGLVMIEAMACGTPVIAFKRGSVPEVIENGVSGFVVEDELSAVAAVKRLNTLPRERVRAAFD ARFTSKVMAQNYVKGYEELLRRKRRTVLREVNAG
Sequences:
>Translated_354_residues MRIAQIAPLHEAVPPKLYGGTERVVSYLTEALVEMGHDVTLFASGDSQTSAKLEAVWPQALRLDPTIRDVMAPHMLLLEE VRRRADEFDVLHFHIDYYPFPLFSRQPVPHLTTLHGRLDLPELQPIFNTFSDVPVVSISDNQRIPLSQANWLQTTYHGLP ENLLKPIPDVKPSYLAFLGRISPEKRVDTAIRIAEQAGMPIKIAAKLDKADRAYYEEKIKPLFSLPHVEYIGEISEAEKA DFLGNAHALLFPIDWPEPFGLVMIEAMACGTPVIAFKRGSVPEVIENGVSGFVVEDELSAVAAVKRLNTLPRERVRAAFD ARFTSKVMAQNYVKGYEELLRRKRRTVLREVNAG >Mature_354_residues MRIAQIAPLHEAVPPKLYGGTERVVSYLTEALVEMGHDVTLFASGDSQTSAKLEAVWPQALRLDPTIRDVMAPHMLLLEE VRRRADEFDVLHFHIDYYPFPLFSRQPVPHLTTLHGRLDLPELQPIFNTFSDVPVVSISDNQRIPLSQANWLQTTYHGLP ENLLKPIPDVKPSYLAFLGRISPEKRVDTAIRIAEQAGMPIKIAAKLDKADRAYYEEKIKPLFSLPHVEYIGEISEAEKA DFLGNAHALLFPIDWPEPFGLVMIEAMACGTPVIAFKRGSVPEVIENGVSGFVVEDELSAVAAVKRLNTLPRERVRAAFD ARFTSKVMAQNYVKGYEELLRRKRRTVLREVNAG
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 39841; Mature: 39841
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIAQIAPLHEAVPPKLYGGTERVVSYLTEALVEMGHDVTLFASGDSQTSAKLEAVWPQA CCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHCHHH LRLDPTIRDVMAPHMLLLEEVRRRADEFDVLHFHIDYYPFPLFSRQPVPHLTTLHGRLDL HCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCC PELQPIFNTFSDVPVVSISDNQRIPLSQANWLQTTYHGLPENLLKPIPDVKPSYLAFLGR CHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHC ISPEKRVDTAIRIAEQAGMPIKIAAKLDKADRAYYEEKIKPLFSLPHVEYIGEISEAEKA CCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH DFLGNAHALLFPIDWPEPFGLVMIEAMACGTPVIAFKRGSVPEVIENGVSGFVVEDELSA HHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCEEEHHHHHH VAAVKRLNTLPRERVRAAFDARFTSKVMAQNYVKGYEELLRRKRRTVLREVNAG HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRIAQIAPLHEAVPPKLYGGTERVVSYLTEALVEMGHDVTLFASGDSQTSAKLEAVWPQA CCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHCHHH LRLDPTIRDVMAPHMLLLEEVRRRADEFDVLHFHIDYYPFPLFSRQPVPHLTTLHGRLDL HCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCC PELQPIFNTFSDVPVVSISDNQRIPLSQANWLQTTYHGLPENLLKPIPDVKPSYLAFLGR CHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHC ISPEKRVDTAIRIAEQAGMPIKIAAKLDKADRAYYEEKIKPLFSLPHVEYIGEISEAEKA CCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH DFLGNAHALLFPIDWPEPFGLVMIEAMACGTPVIAFKRGSVPEVIENGVSGFVVEDELSA HHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCEEEHHHHHH VAAVKRLNTLPRERVRAAFDARFTSKVMAQNYVKGYEELLRRKRRTVLREVNAG HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]