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The map label for this gene is 126455340

Identifier: 126455340

GI number: 126455340

Start: 1380065

End: 1381201

Strand: Direct

Name: 126455340

Synonym: BURPS1106A_1404

Alternate gene names: NA

Gene position: 1380065-1381201 (Clockwise)

Preceding gene: 126453582

Following gene: 126451893

Centisome position: 34.6

GC content: 70.62

Gene sequence:

>1137_bases
GTGCGGCTGAACGATGCGCGCGCGATCGATCAACGAACGAGGGTATCGCCGATGAGCGCGACGCCGACGACGAGCGCATC
GACAACGGCCATGGCCGGCGCGCGGGCGAGCGGGGCGGCCGACGCGCCGGCACGCGCGCCGACCGGTGCGGACGTCGATG
CCGGCGCAACGGCATGGGCCGATGCGACCGCCAATGCGACGGCCAACGCGACGACCGATCCGACGATAGACGCGACGGCC
GACGCGACGACCGATGCAATGGCCAACGTAACGACCGACGCGGCGACCCGCGTCACTGCCAACCCGCCGATCCATGAAAC
AGCCAACGTGCCGGCCAGCACGGCAGCCGCCGCAACGACCGAAGCGGTCGCCGGCGCACGAGCCGGCGCGGCGCTCGATG
CGGCACACCCCGGAGCGACCCAAACGATGAGCCAAACGATGAGCCAAACGATGGCCCAAACGATGACCCAAGCGGGCACC
GAAGCCGCGAGCCCGGCCGGCACGGACGCGGCCGCGAGCGGCACCTGCATCACCCGCGCCACGCGTGCGCGCCGGCCGAT
CCACCCGCTATGGGTGCGCGCGAGCCACTGGCTCAACGCGCTCGCCGCGGTGACGATGGCGCTGTCGGGCTGGCGGATCT
ACAACGCTTCGCCGATCTACGCGGGCTTCGTGTTTCCGCGCGGCGCGACGCTCGGCGGCTGGCTCGGCGGCGCGCTGCAA
TGGCACTTCGCGGCGATGTGGCTGCTGTTTTTCAACGGCGTGTTCTATCTGACGATGGGCGTCGCCACCGGGCGTTTCAC
GCGCAAGCTCCTGCCGCTGAGCGCGTCGGGCGTTGCGCGCGACTTGCGCGACGCGCTGCGCGGGCGGCTGTCGCACGACG
ATCTGTCCGTGTACAACGCGCTCCAGCGCGCCGCGTACGTCGCGGCGATCGCCGATCTCGCGTTGCTCGTGCTGTCCGGG
CTCGTGATCTGGAAATCGGTGCAGTTCCCGCTGCTGCGCGAGTGGCTCGGCGGCTACGACCGCGCGCGCGTCGTGCACTT
CTGGGCGATGGCGTTTCTCGTCGCGTTCTTCGTCGTGCATGTCGCGATGGCGGCGCTCGTGCCGCGCTCGCTGCTCGCGA
TGCTGCGTGGACATTAA

Upstream 100 bases:

>100_bases
CCGCGAACCTGCGCGCGGCGGACGCCGCACGGTATGGGGTCGCGGCGTTTGTCGAGGATCCCGCGACGGGCGACGTCCTG
CAGGCGCTCGATTTGCCGCT

Downstream 100 bases:

>100_bases
AAGGAGTCGCTCATCATGTCGGAAAACGACAGGAAAAAGCGCGAGAACGACATCGCGCGAATCGATCGCGCATCGCTGCT
GATCGACGTGCGCAAGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome B; Transmembrane Hydrogenase Cytochrome B-Type Subunit; HupC/HyaC/HydC Family Protein; Thiosulfate Reductase Cytochrome Subunit B; Transmembrane Hydrogenase Cytochrome B- Type Subunit; Cytochrome; Thiosulfate Reductase Cytochrome B Subunit-Like Protein; Conserved Protein; B-Type Cytochomre; Transmembrane Hydrogenase Cytochrome

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MRLNDARAIDQRTRVSPMSATPTTSASTTAMAGARASGAADAPARAPTGADVDAGATAWADATANATANATTDPTIDATA
DATTDAMANVTTDAATRVTANPPIHETANVPASTAAAATTEAVAGARAGAALDAAHPGATQTMSQTMSQTMAQTMTQAGT
EAASPAGTDAAASGTCITRATRARRPIHPLWVRASHWLNALAAVTMALSGWRIYNASPIYAGFVFPRGATLGGWLGGALQ
WHFAAMWLLFFNGVFYLTMGVATGRFTRKLLPLSASGVARDLRDALRGRLSHDDLSVYNALQRAAYVAAIADLALLVLSG
LVIWKSVQFPLLREWLGGYDRARVVHFWAMAFLVAFFVVHVAMAALVPRSLLAMLRGH

Sequences:

>Translated_378_residues
MRLNDARAIDQRTRVSPMSATPTTSASTTAMAGARASGAADAPARAPTGADVDAGATAWADATANATANATTDPTIDATA
DATTDAMANVTTDAATRVTANPPIHETANVPASTAAAATTEAVAGARAGAALDAAHPGATQTMSQTMSQTMAQTMTQAGT
EAASPAGTDAAASGTCITRATRARRPIHPLWVRASHWLNALAAVTMALSGWRIYNASPIYAGFVFPRGATLGGWLGGALQ
WHFAAMWLLFFNGVFYLTMGVATGRFTRKLLPLSASGVARDLRDALRGRLSHDDLSVYNALQRAAYVAAIADLALLVLSG
LVIWKSVQFPLLREWLGGYDRARVVHFWAMAFLVAFFVVHVAMAALVPRSLLAMLRGH
>Mature_378_residues
MRLNDARAIDQRTRVSPMSATPTTSASTTAMAGARASGAADAPARAPTGADVDAGATAWADATANATANATTDPTIDATA
DATTDAMANVTTDAATRVTANPPIHETANVPASTAAAATTEAVAGARAGAALDAAHPGATQTMSQTMSQTMAQTMTQAGT
EAASPAGTDAAASGTCITRATRARRPIHPLWVRASHWLNALAAVTMALSGWRIYNASPIYAGFVFPRGATLGGWLGGALQ
WHFAAMWLLFFNGVFYLTMGVATGRFTRKLLPLSASGVARDLRDALRGRLSHDDLSVYNALQRAAYVAAIADLALLVLSG
LVIWKSVQFPLLREWLGGYDRARVVHFWAMAFLVAFFVVHVAMAALVPRSLLAMLRGH

Specific function: Unknown

COG id: COG4117

COG function: function code C; Thiosulfate reductase cytochrome B subunit (membrane anchoring protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39435; Mature: 39435

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLNDARAIDQRTRVSPMSATPTTSASTTAMAGARASGAADAPARAPTGADVDAGATAWA
CCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHC
DATANATANATTDPTIDATADATTDAMANVTTDAATRVTANPPIHETANVPASTAAAATT
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHEEECCCCCCCCCCCCCHHHHHHHH
EAVAGARAGAALDAAHPGATQTMSQTMSQTMAQTMTQAGTEAASPAGTDAAASGTCITRA
HHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
TRARRPIHPLWVRASHWLNALAAVTMALSGWRIYNASPIYAGFVFPRGATLGGWLGGALQ
HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEECCCCCCHHHHHHHHHH
WHFAAMWLLFFNGVFYLTMGVATGRFTRKLLPLSASGVARDLRDALRGRLSHDDLSVYNA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
LQRAAYVAAIADLALLVLSGLVIWKSVQFPLLREWLGGYDRARVVHFWAMAFLVAFFVVH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
VAMAALVPRSLLAMLRGH
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLNDARAIDQRTRVSPMSATPTTSASTTAMAGARASGAADAPARAPTGADVDAGATAWA
CCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHC
DATANATANATTDPTIDATADATTDAMANVTTDAATRVTANPPIHETANVPASTAAAATT
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHEEECCCCCCCCCCCCCHHHHHHHH
EAVAGARAGAALDAAHPGATQTMSQTMSQTMAQTMTQAGTEAASPAGTDAAASGTCITRA
HHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
TRARRPIHPLWVRASHWLNALAAVTMALSGWRIYNASPIYAGFVFPRGATLGGWLGGALQ
HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEECCCCCCHHHHHHHHHH
WHFAAMWLLFFNGVFYLTMGVATGRFTRKLLPLSASGVARDLRDALRGRLSHDDLSVYNA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
LQRAAYVAAIADLALLVLSGLVIWKSVQFPLLREWLGGYDRARVVHFWAMAFLVAFFVVH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
VAMAALVPRSLLAMLRGH
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA