Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is 126453582

Identifier: 126453582

GI number: 126453582

Start: 1379250

End: 1380074

Strand: Direct

Name: 126453582

Synonym: BURPS1106A_1403

Alternate gene names: NA

Gene position: 1379250-1380074 (Clockwise)

Preceding gene: 126453317

Following gene: 126455340

Centisome position: 34.58

GC content: 75.15

Gene sequence:

>825_bases
ATGAGCACCGATATGTCGATTTCATTTTCCGTTTCGCTCCGCGCCGTCGCGGCGGCGCTCTCGCTTGCCGCGGCGGGCGC
CGCGCAAGCGGCCGCGGACGGCGCGTGCATGGCCCGCAGCCCCGACGGCCGGCAGGCGCTCGTCGAGCTCTATACGAGCG
AGGGCTGCAGCAGTTGCCCGCCCGCCGACGACTGGCTCGCACGGCTCGCCGCGCGCCGCGCCGCGTTGCGCGTCGTGCCG
CTCGCGCTGCACGTCGATTACTGGGACGGCCTCGGCTGGGCGGATCGCTTCGCGCAGCATCGCTTCACCGAGCGGCAGCA
CGCGCTTGCCGCGCGCGGCGGCGGCCGTTTCGTCTATACGCCGGAGGTCGCGGTTGACGGCCGCGAGCTGCGCGACTGGC
GCGACGCGGACGCGTTCGGGCGGCGCGTCGTCGCGACGGCGGCCGAGCCCGCGCGCGTCGGCATCGCGCTGGCCGCCAAG
CGGCGCGCGGGCGCGCTCGACGTCGCGCTGTCCGTGACGCCGCGCGTCGGCGCGCCGCGCGCGCTCGACGCCTATCTCGC
GCTGTACGAGAACGGCGTCGAATCGCAAGTGAGTGCGGGCGAGAACCGAGGCGCGACGCTGCGGCACGAGCGCGTCGTGC
GTCAATGGATCGGGCCACTCGCCGCGACGGCCGACGCGCACGCGTCGCTCGACGTGCGGCGCGCGCTGCCGCTGCCCGCG
AACCTGCGCGCGGCGGACGCCGCACGGTATGGGGTCGCGGCGTTTGTCGAGGATCCCGCGACGGGCGACGTCCTGCAGGC
GCTCGATTTGCCGCTGTGCGGCTGA

Upstream 100 bases:

>100_bases
GGCGGCCTTCGTCTTGCGGCGCGGTGCGCCGCGGGAAGCCGGATCGCGTCGTGCGCGCCGGCGTGCGACGCGCATCGCGC
CCGCGCACCGGCTCCGACCG

Downstream 100 bases:

>100_bases
ACGATGCGCGCGCGATCGATCAACGAACGAGGGTATCGCCGATGAGCGCGACGCCGACGACGAGCGCATCGACAACGGCC
ATGGCCGGCGCGCGGGCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MSTDMSISFSVSLRAVAAALSLAAAGAAQAAADGACMARSPDGRQALVELYTSEGCSSCPPADDWLARLAARRAALRVVP
LALHVDYWDGLGWADRFAQHRFTERQHALAARGGGRFVYTPEVAVDGRELRDWRDADAFGRRVVATAAEPARVGIALAAK
RRAGALDVALSVTPRVGAPRALDAYLALYENGVESQVSAGENRGATLRHERVVRQWIGPLAATADAHASLDVRRALPLPA
NLRAADAARYGVAAFVEDPATGDVLQALDLPLCG

Sequences:

>Translated_274_residues
MSTDMSISFSVSLRAVAAALSLAAAGAAQAAADGACMARSPDGRQALVELYTSEGCSSCPPADDWLARLAARRAALRVVP
LALHVDYWDGLGWADRFAQHRFTERQHALAARGGGRFVYTPEVAVDGRELRDWRDADAFGRRVVATAAEPARVGIALAAK
RRAGALDVALSVTPRVGAPRALDAYLALYENGVESQVSAGENRGATLRHERVVRQWIGPLAATADAHASLDVRRALPLPA
NLRAADAARYGVAAFVEDPATGDVLQALDLPLCG
>Mature_273_residues
STDMSISFSVSLRAVAAALSLAAAGAAQAAADGACMARSPDGRQALVELYTSEGCSSCPPADDWLARLAARRAALRVVPL
ALHVDYWDGLGWADRFAQHRFTERQHALAARGGGRFVYTPEVAVDGRELRDWRDADAFGRRVVATAAEPARVGIALAAKR
RAGALDVALSVTPRVGAPRALDAYLALYENGVESQVSAGENRGATLRHERVVRQWIGPLAATADAHASLDVRRALPLPAN
LRAADAARYGVAAFVEDPATGDVLQALDLPLCG

Specific function: Unknown

COG id: COG5429

COG function: function code S; Uncharacterized secreted protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28905; Mature: 28774

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDMSISFSVSLRAVAAALSLAAAGAAQAAADGACMARSPDGRQALVELYTSEGCSSCP
CCCCCEEEEEHHHHHHHHHHHHHHHCHHHHHCCCCEECCCCCHHHHHHHHHHHCCCCCCC
PADDWLARLAARRAALRVVPLALHVDYWDGLGWADRFAQHRFTERQHALAARGGGRFVYT
CHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEC
PEVAVDGRELRDWRDADAFGRRVVATAAEPARVGIALAAKRRAGALDVALSVTPRVGAPR
CCEEECCHHHHHHCCHHHHCCEEEEECCCCHHHHHHEEHHCCCCCEEEEEEECCCCCCCH
ALDAYLALYENGVESQVSAGENRGATLRHERVVRQWIGPLAATADAHASLDVRRALPLPA
HHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCC
NLRAADAARYGVAAFVEDPATGDVLQALDLPLCG
CCCHHHHHHHCEEEEECCCCCCHHHHHHCCCCCC
>Mature Secondary Structure 
STDMSISFSVSLRAVAAALSLAAAGAAQAAADGACMARSPDGRQALVELYTSEGCSSCP
CCCCEEEEEHHHHHHHHHHHHHHHCHHHHHCCCCEECCCCCHHHHHHHHHHHCCCCCCC
PADDWLARLAARRAALRVVPLALHVDYWDGLGWADRFAQHRFTERQHALAARGGGRFVYT
CHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEC
PEVAVDGRELRDWRDADAFGRRVVATAAEPARVGIALAAKRRAGALDVALSVTPRVGAPR
CCEEECCHHHHHHCCHHHHCCEEEEECCCCHHHHHHEEHHCCCCCEEEEEEECCCCCCCH
ALDAYLALYENGVESQVSAGENRGATLRHERVVRQWIGPLAATADAHASLDVRRALPLPA
HHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCC
NLRAADAARYGVAAFVEDPATGDVLQALDLPLCG
CCCHHHHHHHCEEEEECCCCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA