| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is phhB
Identifier: 126455335
GI number: 126455335
Start: 3980831
End: 3981223
Strand: Direct
Name: phhB
Synonym: BURPS1106A_4076
Alternate gene names: NA
Gene position: 3980831-3981223 (Clockwise)
Preceding gene: 126454218
Following gene: 126453172
Centisome position: 99.81
GC content: 60.31
Gene sequence:
>393_bases TTGACGAACAATTATGGAAGAATGGCCGATACGGCGCGCCGCCGCGCGAATGGGCGCGGCCGCGCCGCTATTGGACGAGG GACGAAAATGATTCACAAGCTCACATCGGAAGAACGCAAGACGCAGCTTGAAAGCCTGCACCACTGGACCGCCGTTCCCG GCCGCGACGCGATCCAGCGCAGCCTGCGTTTCGCCGATTTCAACGAAGCGTTCGGCTTCATGACGCGCGTCGCGATCAAG GCGCAGGAAATGAATCACCATCCCGAGTGGTTCAACGTCTACAACCGCGTCGATGTCACGCTCTCGACGCACGACGCCAA CGGCCTTACCGAGCGCGATATCAAGCTCGCGCATTTCATCGACGAAGTGGGCAAGCACGCGAAGGCTGCGTGA
Upstream 100 bases:
>100_bases GGCTCGCCGGCGCGCCCGAGCACGCGGCGGGCGCGGTGCTTGACGGCGATCATGTGCTCACGCGCGGCACCGGTGAAGGC TGGGCAGCCGATGCAGACGC
Downstream 100 bases:
>100_bases TTACCCTGATGGGGATTCGATTTCAGGTCGTCAACGTATCGCTTTCCGTAAGCGTTTTCTATGCTGAATGAAGCGAAAGC CTTCAGCCTTCCAAGCCGTT
Product: pterin-4-alpha-carbinolamine dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD [H]
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MTNNYGRMADTARRRANGRGRAAIGRGTKMIHKLTSEERKTQLESLHHWTAVPGRDAIQRSLRFADFNEAFGFMTRVAIK AQEMNHHPEWFNVYNRVDVTLSTHDANGLTERDIKLAHFIDEVGKHAKAA
Sequences:
>Translated_130_residues MTNNYGRMADTARRRANGRGRAAIGRGTKMIHKLTSEERKTQLESLHHWTAVPGRDAIQRSLRFADFNEAFGFMTRVAIK AQEMNHHPEWFNVYNRVDVTLSTHDANGLTERDIKLAHFIDEVGKHAKAA >Mature_129_residues TNNYGRMADTARRRANGRGRAAIGRGTKMIHKLTSEERKTQLESLHHWTAVPGRDAIQRSLRFADFNEAFGFMTRVAIKA QEMNHHPEWFNVYNRVDVTLSTHDANGLTERDIKLAHFIDEVGKHAKAA
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI134133240, Length=113, Percent_Identity=49.5575221238938, Blast_Score=120, Evalue=4e-28, Organism=Homo sapiens, GI4557831, Length=95, Percent_Identity=56.8421052631579, Blast_Score=119, Evalue=7e-28, Organism=Caenorhabditis elegans, GI115533705, Length=94, Percent_Identity=61.7021276595745, Blast_Score=127, Evalue=1e-30, Organism=Drosophila melanogaster, GI45549100, Length=91, Percent_Identity=54.9450549450549, Blast_Score=111, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001533 [H]
Pfam domain/function: PF01329 Pterin_4a [H]
EC number: =4.2.1.96 [H]
Molecular weight: Translated: 14843; Mature: 14712
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNNYGRMADTARRRANGRGRAAIGRGTKMIHKLTSEERKTQLESLHHWTAVPGRDAIQR CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH SLRFADFNEAFGFMTRVAIKAQEMNHHPEWFNVYNRVDVTLSTHDANGLTERDIKLAHFI HHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCEEEEEEECCCCCCCCHHHHHHHHHH DEVGKHAKAA HHHHHHCCCC >Mature Secondary Structure TNNYGRMADTARRRANGRGRAAIGRGTKMIHKLTSEERKTQLESLHHWTAVPGRDAIQR CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH SLRFADFNEAFGFMTRVAIKAQEMNHHPEWFNVYNRVDVTLSTHDANGLTERDIKLAHFI HHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCEEEEEEECCCCCCCCHHHHHHHHHH DEVGKHAKAA HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA