| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is phhA [H]
Identifier: 126454218
GI number: 126454218
Start: 3979941
End: 3980834
Strand: Direct
Name: phhA [H]
Synonym: BURPS1106A_4075
Alternate gene names: 126454218
Gene position: 3979941-3980834 (Clockwise)
Preceding gene: 126454947
Following gene: 126455335
Centisome position: 99.79
GC content: 67.56
Gene sequence:
>894_bases ATGTCCACGGTCGTTACCGCGAAACTGAAGGAACAGTTCGACGCGGGCCTCGAAACCCGCGCCGATTTCACCATCGATCA GCCGCTCGCCCGTTACGGCGACGTCGACCACGCGGTGTGGACGCAGTTGTATACGCGGCAGGCGGCGCTGCTGCGCGGCC GTGCATGCGACGCGTTCATCGAGGGCCTCGCGCGCATCGGCCTCGCGCCCGATCGCGTGCCGTCGTTCGCCGACGTGAAC CGGCGGCTCGAGCCCGCAACCGGCTGGCGCATCGTCGCGGTGCCGGGCCTCGTGCCGGACGCCGTTTTCTTCGAGCATCT CGCGAACCGGCGGTTTCCGGTCACCTGGTGGATGCGCCGCCCGGACCAGCTCGATTATCTACAGGAGCCGGACTGCTTCC ACGATCTGTTCGGCCACGTGCCGCTGCTGATCGATCCCGTATTCGCCGACTACATGCACGCATACGGCCGCGCGGCGCTT CGCGTCGCCGACGACGCAAGCGCGCTCGCGCTCCTTGCGCGCCTCTATTGGTATACGGTCGAATTCGGCCTGATTCGCGA CACGCGCGGCGAAAACGGGCTGCGGATCTACGGCGCGGGCATCGTGTCGAGCAAGGGCGAAACGCTCTACAGCCTCGAAA GCGCGTCGCCGAACCGGATCGGCTTCGATCTCGAACGCGTGATGCGGACCCGATACCGGATCGACACGTTCCAGAAGACC TACTTCGTGATCGACGATTTCGCGCAACTCTTCGCGCTCGCCGACCTCGACGCGCGCGCGCTCGCCGCGCGGCTCGCCGG CGCGCCCGAGCACGCGGCGGGCGCGGTGCTTGACGGCGATCATGTGCTCACGCGCGGCACCGGTGAAGGCTGGGCAGCCG ATGCAGACGCTTGA
Upstream 100 bases:
>100_bases CATTTATCAGCACACAATCGCCCATTTTGCGCCCAAACCGCGCGAGCCCCGCTCTACACTTGCATGCATCCCCACCACTG ATGCGAAGCAGGGCTACCCC
Downstream 100 bases:
>100_bases CGAACAATTATGGAAGAATGGCCGATACGGCGCGCCGCCGCGCGAATGGGCGCGGCCGCGCCGCTATTGGACGAGGGACG AAAATGATTCACAAGCTCAC
Product: phenylalanine 4-monooxygenase
Products: NA
Alternate protein names: PAH; Phe-4-monooxygenase [H]
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MSTVVTAKLKEQFDAGLETRADFTIDQPLARYGDVDHAVWTQLYTRQAALLRGRACDAFIEGLARIGLAPDRVPSFADVN RRLEPATGWRIVAVPGLVPDAVFFEHLANRRFPVTWWMRRPDQLDYLQEPDCFHDLFGHVPLLIDPVFADYMHAYGRAAL RVADDASALALLARLYWYTVEFGLIRDTRGENGLRIYGAGIVSSKGETLYSLESASPNRIGFDLERVMRTRYRIDTFQKT YFVIDDFAQLFALADLDARALAARLAGAPEHAAGAVLDGDHVLTRGTGEGWAADADA
Sequences:
>Translated_297_residues MSTVVTAKLKEQFDAGLETRADFTIDQPLARYGDVDHAVWTQLYTRQAALLRGRACDAFIEGLARIGLAPDRVPSFADVN RRLEPATGWRIVAVPGLVPDAVFFEHLANRRFPVTWWMRRPDQLDYLQEPDCFHDLFGHVPLLIDPVFADYMHAYGRAAL RVADDASALALLARLYWYTVEFGLIRDTRGENGLRIYGAGIVSSKGETLYSLESASPNRIGFDLERVMRTRYRIDTFQKT YFVIDDFAQLFALADLDARALAARLAGAPEHAAGAVLDGDHVLTRGTGEGWAADADA >Mature_296_residues STVVTAKLKEQFDAGLETRADFTIDQPLARYGDVDHAVWTQLYTRQAALLRGRACDAFIEGLARIGLAPDRVPSFADVNR RLEPATGWRIVAVPGLVPDAVFFEHLANRRFPVTWWMRRPDQLDYLQEPDCFHDLFGHVPLLIDPVFADYMHAYGRAALR VADDASALALLARLYWYTVEFGLIRDTRGENGLRIYGAGIVSSKGETLYSLESASPNRIGFDLERVMRTRYRIDTFQKTY FVIDDFAQLFALADLDARALAARLAGAPEHAAGAVLDGDHVLTRGTGEGWAADADA
Specific function: Unknown
COG id: COG3186
COG function: function code E; Phenylalanine-4-hydroxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the biopterin-dependent aromatic amino acid hydroxylase family [H]
Homologues:
Organism=Homo sapiens, GI88900503, Length=226, Percent_Identity=36.283185840708, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI88900505, Length=226, Percent_Identity=36.283185840708, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI88900501, Length=226, Percent_Identity=36.283185840708, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI4557819, Length=227, Percent_Identity=33.0396475770925, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI31795563, Length=229, Percent_Identity=32.7510917030568, Blast_Score=115, Evalue=4e-26, Organism=Homo sapiens, GI4759248, Length=224, Percent_Identity=32.1428571428571, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17531391, Length=225, Percent_Identity=37.3333333333333, Blast_Score=131, Evalue=4e-31, Organism=Caenorhabditis elegans, GI115533973, Length=236, Percent_Identity=31.7796610169492, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI115532103, Length=236, Percent_Identity=31.7796610169492, Blast_Score=118, Evalue=3e-27, Organism=Caenorhabditis elegans, GI71980736, Length=218, Percent_Identity=31.1926605504587, Blast_Score=117, Evalue=7e-27, Organism=Caenorhabditis elegans, GI71980731, Length=150, Percent_Identity=30, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI62472054, Length=224, Percent_Identity=34.375, Blast_Score=123, Evalue=2e-28, Organism=Drosophila melanogaster, GI24660393, Length=224, Percent_Identity=34.375, Blast_Score=123, Evalue=2e-28, Organism=Drosophila melanogaster, GI24654994, Length=271, Percent_Identity=29.8892988929889, Blast_Score=109, Evalue=3e-24, Organism=Drosophila melanogaster, GI17136774, Length=224, Percent_Identity=29.0178571428571, Blast_Score=108, Evalue=6e-24, Organism=Drosophila melanogaster, GI17136776, Length=224, Percent_Identity=29.0178571428571, Blast_Score=108, Evalue=6e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001273 - InterPro: IPR018301 - InterPro: IPR019774 - InterPro: IPR005960 [H]
Pfam domain/function: PF00351 Biopterin_H [H]
EC number: =1.14.16.1 [H]
Molecular weight: Translated: 33095; Mature: 32964
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS00367 BIOPTERIN_HYDROXYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVVTAKLKEQFDAGLETRADFTIDQPLARYGDVDHAVWTQLYTRQAALLRGRACDAFI CCCEEHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHH EGLARIGLAPDRVPSFADVNRRLEPATGWRIVAVPGLVPDAVFFEHLANRRFPVTWWMRR HHHHHHCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEECCC PDQLDYLQEPDCFHDLFGHVPLLIDPVFADYMHAYGRAALRVADDASALALLARLYWYTV CCCCCCCCCCCHHHHHHCCCCCEEHHHHHHHHHHHCHHEEEECCCHHHHHHHHHHHHHHH EFGLIRDTRGENGLRIYGAGIVSSKGETLYSLESASPNRIGFDLERVMRTRYRIDTFQKT HHEEEECCCCCCCEEEEEECEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH YFVIDDFAQLFALADLDARALAARLAGAPEHAAGAVLDGDHVLTRGTGEGWAADADA HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHCCCEECCCEEEECCCCCCCCCCCCC >Mature Secondary Structure STVVTAKLKEQFDAGLETRADFTIDQPLARYGDVDHAVWTQLYTRQAALLRGRACDAFI CCEEHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHH EGLARIGLAPDRVPSFADVNRRLEPATGWRIVAVPGLVPDAVFFEHLANRRFPVTWWMRR HHHHHHCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEECCC PDQLDYLQEPDCFHDLFGHVPLLIDPVFADYMHAYGRAALRVADDASALALLARLYWYTV CCCCCCCCCCCHHHHHHCCCCCEEHHHHHHHHHHHCHHEEEECCCHHHHHHHHHHHHHHH EFGLIRDTRGENGLRIYGAGIVSSKGETLYSLESASPNRIGFDLERVMRTRYRIDTFQKT HHEEEECCCCCCCEEEEEECEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH YFVIDDFAQLFALADLDARALAARLAGAPEHAAGAVLDGDHVLTRGTGEGWAADADA HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHCCCEECCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]