| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is yeaS [C]
Identifier: 126455333
GI number: 126455333
Start: 1461323
End: 1461985
Strand: Direct
Name: yeaS [C]
Synonym: BURPS1106A_1506
Alternate gene names: 126455333
Gene position: 1461323-1461985 (Clockwise)
Preceding gene: 126452643
Following gene: 126454406
Centisome position: 36.64
GC content: 69.08
Gene sequence:
>663_bases ATGTTCGGTCACGCACTCGGCATCACGGATCTCTGGACCTATGTGTTCGGCGTGGTGTTCATCATTCTGCTGCCGGGGCC GAACTCGATGTACGTGCTGTCGCTCGCCGCGCAGCGCGGCGTGAAGGCCGGCTATCGCGCCGCGTGCGGCGTGTTCGTCG GCGACACCGTGCTGATGGTGCTGTCCGCCGCGGGCGTCGCGTCGCTGCTGAAGGCGAATCCGCTGCTGTTCTCGGTCGTC AAGTACGGCGGCGCCGCCTACCTGCTGTACATCGGCGTCGGCATGCTGCGCGGCGCGTGGCGCAAGCTCGCGCGGCCCGC CGCGGACGCGGGCGCCGACGTGCGGCGCGCGGTCGACGGCGAGCGGCCGTTTCGCAAGGCGCTCGTCGTGAGCCTCCTGA ACCCGAAGGCGATCCTGTTCTTCATCTCGTTCTTCATCCAGTTCGTCGATCCGGCTTACGCGCATCCGGCGCTGTCGTTC GTCGTGCTGGGCGCGATCGCGCAGCTCGCGAGCTTCGTCTACCTGAGCACGCTGATCTTCACGGGCGCGCGTCTCGCCGA CCACTTCCGGCGCCGCCGCAAGCTCGCGGCGGGCGCCTCGGGCGGCGTGGGCGGCCTGTTCGTCGGCTTTTCCGTGAAGC TCGCGCTCGCGACGATGAGCTGA
Upstream 100 bases:
>100_bases CACGACATCGGCTATCTGTTCGACCGCTTCACCGCGCTGATGGACGCGGCGAAGGCGCGCAGCGCCTGAACCCGTCGCAT CGATCAAGGAGTCTCGCATC
Downstream 100 bases:
>100_bases GCGCCGCCCGCGGATCGCGCATCAACGATTATTTTCTGAATCCCAAGAGCCATGCCAAAACGCACAGACATCAATAGCAT CCTCATCATCGGCGCCGGCC
Product: leucine export protein LeuE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MFGHALGITDLWTYVFGVVFIILLPGPNSMYVLSLAAQRGVKAGYRAACGVFVGDTVLMVLSAAGVASLLKANPLLFSVV KYGGAAYLLYIGVGMLRGAWRKLARPAADAGADVRRAVDGERPFRKALVVSLLNPKAILFFISFFIQFVDPAYAHPALSF VVLGAIAQLASFVYLSTLIFTGARLADHFRRRRKLAAGASGGVGGLFVGFSVKLALATMS
Sequences:
>Translated_220_residues MFGHALGITDLWTYVFGVVFIILLPGPNSMYVLSLAAQRGVKAGYRAACGVFVGDTVLMVLSAAGVASLLKANPLLFSVV KYGGAAYLLYIGVGMLRGAWRKLARPAADAGADVRRAVDGERPFRKALVVSLLNPKAILFFISFFIQFVDPAYAHPALSF VVLGAIAQLASFVYLSTLIFTGARLADHFRRRRKLAAGASGGVGGLFVGFSVKLALATMS >Mature_220_residues MFGHALGITDLWTYVFGVVFIILLPGPNSMYVLSLAAQRGVKAGYRAACGVFVGDTVLMVLSAAGVASLLKANPLLFSVV KYGGAAYLLYIGVGMLRGAWRKLARPAADAGADVRRAVDGERPFRKALVVSLLNPKAILFFISFFIQFVDPAYAHPALSF VVLGAIAQLASFVYLSTLIFTGARLADHFRRRRKLAAGASGGVGGLFVGFSVKLALATMS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the rht family [H]
Homologues:
Organism=Escherichia coli, GI1788099, Length=209, Percent_Identity=45.933014354067, Blast_Score=189, Evalue=2e-49, Organism=Escherichia coli, GI48994978, Length=194, Percent_Identity=29.8969072164948, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI48994979, Length=161, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004778 - InterPro: IPR001123 [H]
Pfam domain/function: PF01810 LysE [H]
EC number: NA
Molecular weight: Translated: 23336; Mature: 23336
Theoretical pI: Translated: 10.94; Mature: 10.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGHALGITDLWTYVFGVVFIILLPGPNSMYVLSLAAQRGVKAGYRAACGVFVGDTVLMV CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHH LSAAGVASLLKANPLLFSVVKYGGAAYLLYIGVGMLRGAWRKLARPAADAGADVRRAVDG HHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC ERPFRKALVVSLLNPKAILFFISFFIQFVDPAYAHPALSFVVLGAIAQLASFVYLSTLIF CCHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGARLADHFRRRRKLAAGASGGVGGLFVGFSVKLALATMS HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEECC >Mature Secondary Structure MFGHALGITDLWTYVFGVVFIILLPGPNSMYVLSLAAQRGVKAGYRAACGVFVGDTVLMV CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHH LSAAGVASLLKANPLLFSVVKYGGAAYLLYIGVGMLRGAWRKLARPAADAGADVRRAVDG HHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC ERPFRKALVVSLLNPKAILFFISFFIQFVDPAYAHPALSFVVLGAIAQLASFVYLSTLIF CCHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGARLADHFRRRRKLAAGASGGVGGLFVGFSVKLALATMS HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8169201; 10984043 [H]