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The map label for this gene is chiA [H]

Identifier: 126455294

GI number: 126455294

Start: 1928562

End: 1929911

Strand: Reverse

Name: chiA [H]

Synonym: BURPS1106A_1962

Alternate gene names: 126455294

Gene position: 1929911-1928562 (Counterclockwise)

Preceding gene: 126453452

Following gene: 126454899

Centisome position: 48.39

GC content: 69.48

Gene sequence:

>1350_bases
ATGTTGTCCCGCATCGTCCCGCGCGCGCTCGCGGCGGGCTGTCTGTTCGCGGCGGCGGGCGCGTCGCAGGCGGCGGGCGT
GTACGCGCCCTACGTCGACGTGACGCTCTACCCGACGCCGCTCGTCGACCAGATCGGCGTGCAGCAAGGCATCCAGCAAT
TCATGCTCGCGTTCGTCGTGTCGGGCGGCAACCAGTGCACGCCGTCATGGGGCGGCGTGCAGCCGATCGGCAACGGCGCG
ACGGGCGATCTGCTCGACAAGATCGCGACGTCGGTCACCGCCTATCGCGCGAAGGGCGGCGACGTGGCGGTATCGTTCGG
CGGCGCGGCCGGCCAACCGCTGATGCAGGCGTGCTCGAGCGTCGCCGCGCTGAAGGGCGCATATCAGACCGTGATCGACA
CGTACAGCCTCACGCACGTCGATTTCGACATCGAAGGCGCGTCGCAGCAGGATTCGGCCGCCGTCGCGCGCAACTTCCAG
GCGGTCGCGCAACTGCAAGCCGACTACGCGGCCAAAGGCAAGCCGCTGCACGTGACGCTCACGCTGCCGGCGATGCCCAC
GGGCCTCGTGCAGGACGGCCTGAACGTGCTGAACGCGGCGCTCGCGAACAACGTGACGCTCGACGCGGTGAACATCATGA
CGATGGATTACGGCCCGTCCGGCATCGACATGGGCGCGGCCGCGATCAGCGCCGCGCAGGGCCTCTACTCGCAGCTCGAC
ACCGCGTACAAGTCGGCCGGCAAGCCGCAGACCGACGCGCAATTGAAGCAGCTCGTCGGCGTGACGCCGATGATCGGCGT
GAACGACGTCGCGGGCGAGATCTTCACGCTCGCGAACGCGCAGAGCGTGCAGACGACGGCCGCGAACAACAACTACGGCT
TCGTCGGCATCTGGTCGATCACGCGCGACAAGGCATGCGACGGCAGCTCGCAGTACGCGTCGCCGATCTGCTCGGGCGTC
GCGCAGCAGCCGTACGCGTTCTCGTCGGTCTTCAAGCAACTGGGCGGCCATTGGGGCGCGGGCGTCACCCAGGACCCGAA
CTACGGCGGCGGCTCGGACGGCGGCGGCAAGCCCCAGCCGGGCGCGCCGTGGTCGGCCACGCAGGTCTATACGGCGGGCG
CGACGGTCACGTACCAGGGCACGACCTATCAGGCCCAATGGTGGACGCAGGGCGACATTCCGGGGCAGGCGTCGGTGTGG
AAGCCCGTCGGCGGCAACGTGCCGGCCTGGTCATCGACGACCGCGTATCCGGGCGGCGCGTGCGTGACGTATCAGGGCGC
GAAGTATTGCGCGAAATGGTGGACGCAGGGCGACGTGCCGAGCGCGGGCGGCCCCTGGACGCGAGCGTGA

Upstream 100 bases:

>100_bases
AAGCCGAAGCGCCGGCCGAGCGTCGAGTGCGGCCGCGCGGCGGCGATATGCAGGCCAGCATATCCACCCCATCAACATGG
AGAGAACAATGAATTTCAGC

Downstream 100 bases:

>100_bases
CCGAGGCGGCCGGCCCGCGCGTCCTCGCGCGGTAGCCGGCCGCGGGACCGGCGCGCCGCCGGCCGGTCCGGTGCGTGCGG
CCGCGCGGGCCGTTCGGCGC

Product: glycosy hydrolase family protein

Products: NA

Alternate protein names: Chitinase; Lysozyme [H]

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MLSRIVPRALAAGCLFAAAGASQAAGVYAPYVDVTLYPTPLVDQIGVQQGIQQFMLAFVVSGGNQCTPSWGGVQPIGNGA
TGDLLDKIATSVTAYRAKGGDVAVSFGGAAGQPLMQACSSVAALKGAYQTVIDTYSLTHVDFDIEGASQQDSAAVARNFQ
AVAQLQADYAAKGKPLHVTLTLPAMPTGLVQDGLNVLNAALANNVTLDAVNIMTMDYGPSGIDMGAAAISAAQGLYSQLD
TAYKSAGKPQTDAQLKQLVGVTPMIGVNDVAGEIFTLANAQSVQTTAANNNYGFVGIWSITRDKACDGSSQYASPICSGV
AQQPYAFSSVFKQLGGHWGAGVTQDPNYGGGSDGGGKPQPGAPWSATQVYTAGATVTYQGTTYQAQWWTQGDIPGQASVW
KPVGGNVPAWSSTTAYPGGACVTYQGAKYCAKWWTQGDVPSAGGPWTRA

Sequences:

>Translated_449_residues
MLSRIVPRALAAGCLFAAAGASQAAGVYAPYVDVTLYPTPLVDQIGVQQGIQQFMLAFVVSGGNQCTPSWGGVQPIGNGA
TGDLLDKIATSVTAYRAKGGDVAVSFGGAAGQPLMQACSSVAALKGAYQTVIDTYSLTHVDFDIEGASQQDSAAVARNFQ
AVAQLQADYAAKGKPLHVTLTLPAMPTGLVQDGLNVLNAALANNVTLDAVNIMTMDYGPSGIDMGAAAISAAQGLYSQLD
TAYKSAGKPQTDAQLKQLVGVTPMIGVNDVAGEIFTLANAQSVQTTAANNNYGFVGIWSITRDKACDGSSQYASPICSGV
AQQPYAFSSVFKQLGGHWGAGVTQDPNYGGGSDGGGKPQPGAPWSATQVYTAGATVTYQGTTYQAQWWTQGDIPGQASVW
KPVGGNVPAWSSTTAYPGGACVTYQGAKYCAKWWTQGDVPSAGGPWTRA
>Mature_449_residues
MLSRIVPRALAAGCLFAAAGASQAAGVYAPYVDVTLYPTPLVDQIGVQQGIQQFMLAFVVSGGNQCTPSWGGVQPIGNGA
TGDLLDKIATSVTAYRAKGGDVAVSFGGAAGQPLMQACSSVAALKGAYQTVIDTYSLTHVDFDIEGASQQDSAAVARNFQ
AVAQLQADYAAKGKPLHVTLTLPAMPTGLVQDGLNVLNAALANNVTLDAVNIMTMDYGPSGIDMGAAAISAAQGLYSQLD
TAYKSAGKPQTDAQLKQLVGVTPMIGVNDVAGEIFTLANAQSVQTTAANNNYGFVGIWSITRDKACDGSSQYASPICSGV
AQQPYAFSSVFKQLGGHWGAGVTQDPNYGGGSDGGGKPQPGAPWSATQVYTAGATVTYQGTTYQAQWWTQGDIPGQASVW
KPVGGNVPAWSSTTAYPGGACVTYQGAKYCAKWWTQGDVPSAGGPWTRA

Specific function: Bifunctional enzyme with lysozyme/chitinase activity [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 chitin-binding type-3 domains [H]

Homologues:

Organism=Escherichia coli, GI1789736, Length=318, Percent_Identity=39.622641509434, Blast_Score=205, Evalue=6e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003610
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF02839 CBM_5_12 [H]

EC number: =3.2.1.14; =3.2.1.17 [H]

Molecular weight: Translated: 46127; Mature: 46127

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSRIVPRALAAGCLFAAAGASQAAGVYAPYVDVTLYPTPLVDQIGVQQGIQQFMLAFVV
CCHHHHHHHHHHHHHHHHCCCCCCCCEEECEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
SGGNQCTPSWGGVQPIGNGATGDLLDKIATSVTAYRAKGGDVAVSFGGAAGQPLMQACSS
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHH
VAALKGAYQTVIDTYSLTHVDFDIEGASQQDSAAVARNFQAVAQLQADYAAKGKPLHVTL
HHHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
TLPAMPTGLVQDGLNVLNAALANNVTLDAVNIMTMDYGPSGIDMGAAAISAAQGLYSQLD
ECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
TAYKSAGKPQTDAQLKQLVGVTPMIGVNDVAGEIFTLANAQSVQTTAANNNYGFVGIWSI
HHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHEEECCCCCEEEEECCCCCCEEEEEEE
TRDKACDGSSQYASPICSGVAQQPYAFSSVFKQLGGHWGAGVTQDPNYGGGSDGGGKPQP
CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
GAPWSATQVYTAGATVTYQGTTYQAQWWTQGDIPGQASVWKPVGGNVPAWSSTTAYPGGA
CCCCCCCEEEECCCEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
CVTYQGAKYCAKWWTQGDVPSAGGPWTRA
EEEECCHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLSRIVPRALAAGCLFAAAGASQAAGVYAPYVDVTLYPTPLVDQIGVQQGIQQFMLAFVV
CCHHHHHHHHHHHHHHHHCCCCCCCCEEECEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
SGGNQCTPSWGGVQPIGNGATGDLLDKIATSVTAYRAKGGDVAVSFGGAAGQPLMQACSS
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHH
VAALKGAYQTVIDTYSLTHVDFDIEGASQQDSAAVARNFQAVAQLQADYAAKGKPLHVTL
HHHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
TLPAMPTGLVQDGLNVLNAALANNVTLDAVNIMTMDYGPSGIDMGAAAISAAQGLYSQLD
ECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
TAYKSAGKPQTDAQLKQLVGVTPMIGVNDVAGEIFTLANAQSVQTTAANNNYGFVGIWSI
HHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHEEECCCCCEEEEECCCCCCEEEEEEE
TRDKACDGSSQYASPICSGVAQQPYAFSSVFKQLGGHWGAGVTQDPNYGGGSDGGGKPQP
CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
GAPWSATQVYTAGATVTYQGTTYQAQWWTQGDIPGQASVWKPVGGNVPAWSSTTAYPGGA
CCCCCCCEEEECCCEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
CVTYQGAKYCAKWWTQGDVPSAGGPWTRA
EEEECCHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 2661540; 10419961; 10760150 [H]