| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is cbiG/cobJ [H]
Identifier: 126453452
GI number: 126453452
Start: 1930268
End: 1932097
Strand: Reverse
Name: cbiG/cobJ [H]
Synonym: BURPS1106A_1964
Alternate gene names: 126453452
Gene position: 1932097-1930268 (Counterclockwise)
Preceding gene: 126454586
Following gene: 126455294
Centisome position: 48.44
GC content: 76.5
Gene sequence:
>1830_bases ATGACCGCCGCGCCCGCGATCGTGATACTCGGGCCGGGCGCGCTCGAGACCGCGCGCCGGATCCAGGCGCGCTTCGACGG CGCGCGGGTGCACGCGCTCGCCGGGCGCGCCGAGGCGGACCTCGCGTTCGCCGAGCTCGGCCCGCATCTGCGCGAGCTGT ATGCGCGCGGCGCGCCGATCGTCGCGCTGTTCGCGGCCGGCATCGCGATTCGCTGCGTCGCGCCGTGCCTCGCCGACAAG GGCGCGGAGCCGCCCGTGCTCGCCGTCGCCGAGGACGGCAGCGCGGTCGTGCCGCTGTTGGGCGGCCTCGCGGGCGCCAA CGCGCTCGCGCGCGAGATCGCCGACGCGCTCGGCGTCGCGGCCGCGATCACGACGAGCGGCGAACTGCGCTTCGGCGCGT GCATGCTGAACCCGCCCGAAGGCTACGCGCTCGCCGATCTCGACGCGGGCAAGCGCTTCGTGTCCGATCTGCTCGCGGGC GAAAGCACGCGCGTCGAAGGCGATGCGCGCTGGCTCGACGATGTCGCGCTGCCGCGCGACGCGCACGCGGCGCGCGTGAT CCGCGTCACGCCGCATGCGTCGCGTGGCGACGCGCACGCGTTGCTGATCCATCCGCGCAGCGTCGTCGTCGCGTTGGGCG ATGGCGATGGGGATAACGACGGCGAGGGCCTGCGCGACGACGCGCGCAGCGTCTCGGCGCCCGATGCCACCGGTCGCGCC CGCGCGAACGCGGCGCCGGATCTGCCGCCGCTTGCCGCGCGCATCGCCGCCGCGCTCGCCGCGCATGATCTCGCGCCGCT CGCGCTCGCGGCCGTCGTCGCGCCCGCGCGGCGCATCGCCGAGCACGCGCTGACCGACGCGGCGCGCGCGCTGCGCGCGC CGTTGCGCTTCGTCGAAACGAACGCGCGCGACGCCGCCGGCGTGCTCGACGCCGCGTTGCCCGGGGCGCTCGCGCCGCGC GTCGACGCCTCGCGCGCCGCGGCGGGCTCACCGCGAACGACGCCGCCCGAGCCGCGCGACGTCGCGATCGCCGTCGCCCG CGCGCCCGTCGACGCCGATGCGCTCGGCATCGCGCGCGGCCGCCTGACGGTGCTCGGCCTCGGCCCCGGCCGCGCGGACC TGATGACCCCCGCCGCGCGCGCGGCGCTCGCCGACGCGACCGACATCGTCGGCTACGCGACCTACGTGAACATGGCGGGC CCGTTGCGCGCCGATCAGCAACTGCACGTATCCGACAACCGCGAGGAGCTGCAGCGCGCGCGCCACGCGTTCGAGCTCGC CGCGCGGGGCCGGCGCGTCGCGGTCGTGTCCTCGGGCGACCCCGGCGTGTTCGCGATGGCGGCCGCCGTGCTCGAGGCGC TCGACGGCGCCGACGACGCGCGCTGGGCGGCCGTCGAGCTCGACGTCGTGCCCGGCGTGTCGGCCGCGCTCGCGACGGCG GCCGAAGCCGGCGCGCCGCTCGGCCACGATTTCTGCCTGATCTCGCTGTCGGACAACCTGAAGCCGTGGGCGATCATCGA AAAACGCATCGATCACGCGGCGGCCGCCGATTTCGCGCTCGCGTTCTACAACCCGGTGTCGCGCGCGCGGCCCGTGCAGT TCGATCGCGCGCTCGACATCGTGCGCCGGCATCGCGCGCCGGAGACGGTCGTCGTGCTCGGCCGCGACATCGGCCGCCCC GGCGCGACGCTCGCGACGACGACGCTCGCCGCGCTGTCCGCGCAGCAGGTCGACATGCGCACGATGGTGATCGTCGGCTC GTCGACGACGCGCCGCGTCGCGCGCGACGGCGCGCGCGACTGGGTGTATACGCCGCGCTGGTATCGCTGA
Upstream 100 bases:
>100_bases CGACGATGGCCGCGCAGCGGATCGTGCCGCTCGCGGACGTCGATCCGATGGCGTCGCCGTATTTTTCGCTGCTCGTCGTG CCGGGGGAAAAATGGCAAGG
Downstream 100 bases:
>100_bases TATCGCGGCCGCCGAAGCGAGGCGACGCACGGCGCGTCGTCCCGCTTCGCCGGCAACGGGCGCGCCGCGCACCGAGCGCG CCCGCTGCGCGCTTGCGCGC
Product: cobalamin biosynthesis protein CbiG/precorrin-3B C17-methyltransferase
Products: NA
Alternate protein names: Precorrin-3 methylase; Precorrin-3 methyltransferase [H]
Number of amino acids: Translated: 609; Mature: 608
Protein sequence:
>609_residues MTAAPAIVILGPGALETARRIQARFDGARVHALAGRAEADLAFAELGPHLRELYARGAPIVALFAAGIAIRCVAPCLADK GAEPPVLAVAEDGSAVVPLLGGLAGANALAREIADALGVAAAITTSGELRFGACMLNPPEGYALADLDAGKRFVSDLLAG ESTRVEGDARWLDDVALPRDAHAARVIRVTPHASRGDAHALLIHPRSVVVALGDGDGDNDGEGLRDDARSVSAPDATGRA RANAAPDLPPLAARIAAALAAHDLAPLALAAVVAPARRIAEHALTDAARALRAPLRFVETNARDAAGVLDAALPGALAPR VDASRAAAGSPRTTPPEPRDVAIAVARAPVDADALGIARGRLTVLGLGPGRADLMTPAARAALADATDIVGYATYVNMAG PLRADQQLHVSDNREELQRARHAFELAARGRRVAVVSSGDPGVFAMAAAVLEALDGADDARWAAVELDVVPGVSAALATA AEAGAPLGHDFCLISLSDNLKPWAIIEKRIDHAAAADFALAFYNPVSRARPVQFDRALDIVRRHRAPETVVVLGRDIGRP GATLATTTLAALSAQQVDMRTMVIVGSSTTRRVARDGARDWVYTPRWYR
Sequences:
>Translated_609_residues MTAAPAIVILGPGALETARRIQARFDGARVHALAGRAEADLAFAELGPHLRELYARGAPIVALFAAGIAIRCVAPCLADK GAEPPVLAVAEDGSAVVPLLGGLAGANALAREIADALGVAAAITTSGELRFGACMLNPPEGYALADLDAGKRFVSDLLAG ESTRVEGDARWLDDVALPRDAHAARVIRVTPHASRGDAHALLIHPRSVVVALGDGDGDNDGEGLRDDARSVSAPDATGRA RANAAPDLPPLAARIAAALAAHDLAPLALAAVVAPARRIAEHALTDAARALRAPLRFVETNARDAAGVLDAALPGALAPR VDASRAAAGSPRTTPPEPRDVAIAVARAPVDADALGIARGRLTVLGLGPGRADLMTPAARAALADATDIVGYATYVNMAG PLRADQQLHVSDNREELQRARHAFELAARGRRVAVVSSGDPGVFAMAAAVLEALDGADDARWAAVELDVVPGVSAALATA AEAGAPLGHDFCLISLSDNLKPWAIIEKRIDHAAAADFALAFYNPVSRARPVQFDRALDIVRRHRAPETVVVLGRDIGRP GATLATTTLAALSAQQVDMRTMVIVGSSTTRRVARDGARDWVYTPRWYR >Mature_608_residues TAAPAIVILGPGALETARRIQARFDGARVHALAGRAEADLAFAELGPHLRELYARGAPIVALFAAGIAIRCVAPCLADKG AEPPVLAVAEDGSAVVPLLGGLAGANALAREIADALGVAAAITTSGELRFGACMLNPPEGYALADLDAGKRFVSDLLAGE STRVEGDARWLDDVALPRDAHAARVIRVTPHASRGDAHALLIHPRSVVVALGDGDGDNDGEGLRDDARSVSAPDATGRAR ANAAPDLPPLAARIAAALAAHDLAPLALAAVVAPARRIAEHALTDAARALRAPLRFVETNARDAAGVLDAALPGALAPRV DASRAAAGSPRTTPPEPRDVAIAVARAPVDADALGIARGRLTVLGLGPGRADLMTPAARAALADATDIVGYATYVNMAGP LRADQQLHVSDNREELQRARHAFELAARGRRVAVVSSGDPGVFAMAAAVLEALDGADDARWAAVELDVVPGVSAALATAA EAGAPLGHDFCLISLSDNLKPWAIIEKRIDHAAAADFALAFYNPVSRARPVQFDRALDIVRRHRAPETVVVLGRDIGRPG ATLATTTLAALSAQQVDMRTMVIVGSSTTRRVARDGARDWVYTPRWYR
Specific function: Methyltransferase that catalyzes the methylation of C-17 in precorrin-3B to form precorrin-4 [H]
COG id: COG1010
COG function: function code H; Precorrin-3B methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000878 - InterPro: IPR014777 - InterPro: IPR014776 - InterPro: IPR006363 [H]
Pfam domain/function: PF00590 TP_methylase [H]
EC number: =2.1.1.131 [H]
Molecular weight: Translated: 63022; Mature: 62891
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAPAIVILGPGALETARRIQARFDGARVHALAGRAEADLAFAELGPHLRELYARGAPI CCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCHHHHHHHHCCCCH VALFAAGIAIRCVAPCLADKGAEPPVLAVAEDGSAVVPLLGGLAGANALAREIADALGVA HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AAITTSGELRFGACMLNPPEGYALADLDAGKRFVSDLLAGESTRVEGDARWLDDVALPRD HEEECCCCEEEEEEEECCCCCCEEEECHHHHHHHHHHHCCCCCEECCCHHHHHHHCCCCC AHAARVIRVTPHASRGDAHALLIHPRSVVVALGDGDGDNDGEGLRDDARSVSAPDATGRA CCCEEEEEECCCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCC RANAAPDLPPLAARIAAALAAHDLAPLALAAVVAPARRIAEHALTDAARALRAPLRFVET CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NARDAAGVLDAALPGALAPRVDASRAAAGSPRTTPPEPRDVAIAVARAPVDADALGIARG CCCHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCEEEEEEECCCCCHHHEEECC RLTVLGLGPGRADLMTPAARAALADATDIVGYATYVNMAGPLRADQQLHVSDNREELQRA CEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHH RHAFELAARGRRVAVVSSGDPGVFAMAAAVLEALDGADDARWAAVELDVVPGVSAALATA HHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHH AEAGAPLGHDFCLISLSDNLKPWAIIEKRIDHAAAADFALAFYNPVSRARPVQFDRALDI HHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHH VRRHRAPETVVVLGRDIGRPGATLATTTLAALSAQQVDMRTMVIVGSSTTRRVARDGARD HHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHCCCCC WVYTPRWYR CCCCCCCCC >Mature Secondary Structure TAAPAIVILGPGALETARRIQARFDGARVHALAGRAEADLAFAELGPHLRELYARGAPI CCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCHHHHHHHHCCCCH VALFAAGIAIRCVAPCLADKGAEPPVLAVAEDGSAVVPLLGGLAGANALAREIADALGVA HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AAITTSGELRFGACMLNPPEGYALADLDAGKRFVSDLLAGESTRVEGDARWLDDVALPRD HEEECCCCEEEEEEEECCCCCCEEEECHHHHHHHHHHHCCCCCEECCCHHHHHHHCCCCC AHAARVIRVTPHASRGDAHALLIHPRSVVVALGDGDGDNDGEGLRDDARSVSAPDATGRA CCCEEEEEECCCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCC RANAAPDLPPLAARIAAALAAHDLAPLALAAVVAPARRIAEHALTDAARALRAPLRFVET CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NARDAAGVLDAALPGALAPRVDASRAAAGSPRTTPPEPRDVAIAVARAPVDADALGIARG CCCHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCEEEEEEECCCCCHHHEEECC RLTVLGLGPGRADLMTPAARAALADATDIVGYATYVNMAGPLRADQQLHVSDNREELQRA CEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHH RHAFELAARGRRVAVVSSGDPGVFAMAAAVLEALDGADDARWAAVELDVVPGVSAALATA HHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHH AEAGAPLGHDFCLISLSDNLKPWAIIEKRIDHAAAADFALAFYNPVSRARPVQFDRALDI HHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHH VRRHRAPETVVVLGRDIGRPGATLATTTLAALSAQQVDMRTMVIVGSSTTRRVARDGARD HHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHCCCCC WVYTPRWYR CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2211521; 8226690 [H]