The gene/protein map for NC_009076 is currently unavailable.
Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

Click here to switch to the map view.

The map label for this gene is 126455225

Identifier: 126455225

GI number: 126455225

Start: 3607235

End: 3609004

Strand: Direct

Name: 126455225

Synonym: BURPS1106A_3692

Alternate gene names: NA

Gene position: 3607235-3609004 (Clockwise)

Preceding gene: 126451514

Following gene: 126453814

Centisome position: 90.44

GC content: 61.69

Gene sequence:

>1770_bases
GTGAAAATGAGCCATACCAAGGGGTTTGCCAAGCTGGCATCGGTCGTCGCAGTCGGAGCGGCGCTCACGGCATGCGGGGG
CGGTGGAGGATCTGGTACCAGTACGACGACAGCCATCACAAATACCCAGCTCACGGGCAAGGCGATCGACGGCTACCTGG
CGGGCGCTACTGTCTGCTTCGATAACGGTCACGGTGCGTGCGATCCGAGCCTGCCGTCCACCACGACCGATGCCAGCGGC
AATTACACGCTCAACGTTTCCAGCAACGTAACCGGCAAGCAGCTCGACGTGCTCGTCACCTCGAACACGACCGACGGCGG
CAGCAAGTTCACCAGCACGTTCGCGATGTCGGCGATCGTTTCCGGCAACTCGCAAAACGTCACGCCACTCACGACGATGG
TGGTCGCGCAGCTGAAGGCGGGGAAGTCGCAAGCAGATGCGATCACAGCCGTGCAGAACCTCATCGGCAGCAACGTTGAT
CTGAATGCGGACTATGTAGGCAACGGCGACGCCAGAACGACAGCTACTGCGGCTAGCATGGTCAGTCACATGACGGCGCT
TGCCGGCCAGGGGCCAATCTCGTGGTCGCAAGTGCAGGCAACCATGAACGCGTACGCTGCAAAAGGGTCGGTCATCGGCG
TGCAGCAATCCGATGTCGATGCACAGCTCACTAATCCTGCCTATAGCTCGCCGGTCGATGCGACGACGGCGCTTGCTAGT
CCGCTTTACACGGTTGATGGGGACCTTTCGCAGTTCATCGTCGGGAGCAGCATTTCGGCGGCGCTTTCGCCGGTTCGCGA
GAACTTCACGCTCTCCGGTTCGACGCTTTCGGTTACGCAAGAAGCTCAGAGCAACGGCGCGTGGTCGGCGGCTTCGCCGG
TCGGCAGTTACGACGCGGGTTTCAGCGGTTCTTGGGTGTCCAATGACGCTGGCGTTGGTGCATACGCCATGAAAGCGGAC
GGCACATGGACCAGCTGGTTGACGGCCGCGCAGTTGCATCCGTCGTACAGCCTATCCACGGTCGGCTCCAAGCTCGTCGG
CACCGATCCGAATACGGGCGACGCGCTCACGGTCGCCTACCGGATGATCGATGTCAGCGGCCAGCCGCTCTCGAGCGCGC
TGCAGATCGACTATCGGAATCCCGTGCGCGGAGCCATGACGGGCACGTTTCCGTCCGGGACGACCGCCTACCTTGCTACG
ACCGCCTATGCGAACGATCGCCTTATCCTCGTCAACCAAGGGTTCGGTATGCCTTGGATCAACGGCGCGGACGTGAACTC
GTCGACGATCGTCAATGGCTCGATTCTGTACACCCTCGGCGACCCCAGCACGACTTACACGGCGGTGCAACAGGCCGTTG
GGACGCAGACGGACATCGCGGGTGGGTGCCTGCTGCTCAGCATTCAGGCAGGCGGTGTCGCGCAAGTGGTCCAAAGCGGT
AAGTCGGGATGCAACTACGGCAATGTATCGCTCTCGTTCCCGGTCACCGGCAGCTGGTCGGTCTACTCGCGCAATGCCAA
CGTCATCACGATCAGCCTGCCGAAGTCCGTTGGTGCGCCGACCGTGCCAATCGATGATGACATCAAGAATGTGATCAACG
CTGGCGGTTCGCTCGTCGTCGGCCTGATGAACGGCAAGCTCATGGGTGGTTACATGCTACCGGCCAGCCAGCCGCAAACG
GTCGCTCAATTCCCGGCAGCGACGACCGACACCATCGCCGCGTCGATGCGCGCCGCAGCCGCGAGCTTGGGCATCCAACA
AAACCCATAA

Upstream 100 bases:

>100_bases
ATAGCTGCCTAGCGCGATCGCGCATGAGCCGCGCATGTCGTTTGGGCAATCAAAGCATCGCTCCCGCTTCAGCGGAGCGT
CGTTCAAAGGAAATGAAAAG

Downstream 100 bases:

>100_bases
GGACCTGCGTCCTTCCTCTTTCGCTCCCGGCGGCCTTACCTCGGGAGCGATCTCTTCCTTACAAGACATCATGAAACAGT
TCAGCCGATTTTCCGCGACT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 589; Mature: 589

Protein sequence:

>589_residues
MKMSHTKGFAKLASVVAVGAALTACGGGGGSGTSTTTAITNTQLTGKAIDGYLAGATVCFDNGHGACDPSLPSTTTDASG
NYTLNVSSNVTGKQLDVLVTSNTTDGGSKFTSTFAMSAIVSGNSQNVTPLTTMVVAQLKAGKSQADAITAVQNLIGSNVD
LNADYVGNGDARTTATAASMVSHMTALAGQGPISWSQVQATMNAYAAKGSVIGVQQSDVDAQLTNPAYSSPVDATTALAS
PLYTVDGDLSQFIVGSSISAALSPVRENFTLSGSTLSVTQEAQSNGAWSAASPVGSYDAGFSGSWVSNDAGVGAYAMKAD
GTWTSWLTAAQLHPSYSLSTVGSKLVGTDPNTGDALTVAYRMIDVSGQPLSSALQIDYRNPVRGAMTGTFPSGTTAYLAT
TAYANDRLILVNQGFGMPWINGADVNSSTIVNGSILYTLGDPSTTYTAVQQAVGTQTDIAGGCLLLSIQAGGVAQVVQSG
KSGCNYGNVSLSFPVTGSWSVYSRNANVITISLPKSVGAPTVPIDDDIKNVINAGGSLVVGLMNGKLMGGYMLPASQPQT
VAQFPAATTDTIAASMRAAAASLGIQQNP

Sequences:

>Translated_589_residues
MKMSHTKGFAKLASVVAVGAALTACGGGGGSGTSTTTAITNTQLTGKAIDGYLAGATVCFDNGHGACDPSLPSTTTDASG
NYTLNVSSNVTGKQLDVLVTSNTTDGGSKFTSTFAMSAIVSGNSQNVTPLTTMVVAQLKAGKSQADAITAVQNLIGSNVD
LNADYVGNGDARTTATAASMVSHMTALAGQGPISWSQVQATMNAYAAKGSVIGVQQSDVDAQLTNPAYSSPVDATTALAS
PLYTVDGDLSQFIVGSSISAALSPVRENFTLSGSTLSVTQEAQSNGAWSAASPVGSYDAGFSGSWVSNDAGVGAYAMKAD
GTWTSWLTAAQLHPSYSLSTVGSKLVGTDPNTGDALTVAYRMIDVSGQPLSSALQIDYRNPVRGAMTGTFPSGTTAYLAT
TAYANDRLILVNQGFGMPWINGADVNSSTIVNGSILYTLGDPSTTYTAVQQAVGTQTDIAGGCLLLSIQAGGVAQVVQSG
KSGCNYGNVSLSFPVTGSWSVYSRNANVITISLPKSVGAPTVPIDDDIKNVINAGGSLVVGLMNGKLMGGYMLPASQPQT
VAQFPAATTDTIAASMRAAAASLGIQQNP
>Mature_589_residues
MKMSHTKGFAKLASVVAVGAALTACGGGGGSGTSTTTAITNTQLTGKAIDGYLAGATVCFDNGHGACDPSLPSTTTDASG
NYTLNVSSNVTGKQLDVLVTSNTTDGGSKFTSTFAMSAIVSGNSQNVTPLTTMVVAQLKAGKSQADAITAVQNLIGSNVD
LNADYVGNGDARTTATAASMVSHMTALAGQGPISWSQVQATMNAYAAKGSVIGVQQSDVDAQLTNPAYSSPVDATTALAS
PLYTVDGDLSQFIVGSSISAALSPVRENFTLSGSTLSVTQEAQSNGAWSAASPVGSYDAGFSGSWVSNDAGVGAYAMKAD
GTWTSWLTAAQLHPSYSLSTVGSKLVGTDPNTGDALTVAYRMIDVSGQPLSSALQIDYRNPVRGAMTGTFPSGTTAYLAT
TAYANDRLILVNQGFGMPWINGADVNSSTIVNGSILYTLGDPSTTYTAVQQAVGTQTDIAGGCLLLSIQAGGVAQVVQSG
KSGCNYGNVSLSFPVTGSWSVYSRNANVITISLPKSVGAPTVPIDDDIKNVINAGGSLVVGLMNGKLMGGYMLPASQPQT
VAQFPAATTDTIAASMRAAAASLGIQQNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59474; Mature: 59474

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMSHTKGFAKLASVVAVGAALTACGGGGGSGTSTTTAITNTQLTGKAIDGYLAGATVCF
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECEECCHHHCCEEECEEEEE
DNGHGACDPSLPSTTTDASGNYTLNVSSNVTGKQLDVLVTSNTTDGGSKFTSTFAMSAIV
ECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHEEEEE
SGNSQNVTPLTTMVVAQLKAGKSQADAITAVQNLIGSNVDLNADYVGNGDARTTATAASM
ECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHH
VSHMTALAGQGPISWSQVQATMNAYAAKGSVIGVQQSDVDAQLTNPAYSSPVDATTALAS
HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCEECCCCCCCCCCHHHHHHC
PLYTVDGDLSQFIVGSSISAALSPVRENFTLSGSTLSVTQEAQSNGAWSAASPVGSYDAG
CCEEECCCHHHHHHCCCHHHHHHHHHHCEEECCCEEEEEHHHHCCCCCCCCCCCCCCCCC
FSGSWVSNDAGVGAYAMKADGTWTSWLTAAQLHPSYSLSTVGSKLVGTDPNTGDALTVAY
CCCCCCCCCCCCCEEEEECCCCHHHHEEHHHCCCCCCHHHHCCEEECCCCCCCCEEEEEE
RMIDVSGQPLSSALQIDYRNPVRGAMTGTFPSGTTAYLATTAYANDRLILVNQGFGMPWI
EEEECCCCCCCCEEEEECCCCCCCCEECCCCCCCEEEEEEEEECCCEEEEEECCCCCCCC
NGADVNSSTIVNGSILYTLGDPSTTYTAVQQAVGTQTDIAGGCLLLSIQAGGVAQVVQSG
CCCCCCCCEEECCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHCC
KSGCNYGNVSLSFPVTGSWSVYSRNANVITISLPKSVGAPTVPIDDDIKNVINAGGSLVV
CCCCCCCCEEEEECCCCCEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEE
GLMNGKLMGGYMLPASQPQTVAQFPAATTDTIAASMRAAAASLGIQQNP
EEECCEEECCEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKMSHTKGFAKLASVVAVGAALTACGGGGGSGTSTTTAITNTQLTGKAIDGYLAGATVCF
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECEECCHHHCCEEECEEEEE
DNGHGACDPSLPSTTTDASGNYTLNVSSNVTGKQLDVLVTSNTTDGGSKFTSTFAMSAIV
ECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHEEEEE
SGNSQNVTPLTTMVVAQLKAGKSQADAITAVQNLIGSNVDLNADYVGNGDARTTATAASM
ECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHH
VSHMTALAGQGPISWSQVQATMNAYAAKGSVIGVQQSDVDAQLTNPAYSSPVDATTALAS
HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCEECCCCCCCCCCHHHHHHC
PLYTVDGDLSQFIVGSSISAALSPVRENFTLSGSTLSVTQEAQSNGAWSAASPVGSYDAG
CCEEECCCHHHHHHCCCHHHHHHHHHHCEEECCCEEEEEHHHHCCCCCCCCCCCCCCCCC
FSGSWVSNDAGVGAYAMKADGTWTSWLTAAQLHPSYSLSTVGSKLVGTDPNTGDALTVAY
CCCCCCCCCCCCCEEEEECCCCHHHHEEHHHCCCCCCHHHHCCEEECCCCCCCCEEEEEE
RMIDVSGQPLSSALQIDYRNPVRGAMTGTFPSGTTAYLATTAYANDRLILVNQGFGMPWI
EEEECCCCCCCCEEEEECCCCCCCCEECCCCCCCEEEEEEEEECCCEEEEEECCCCCCCC
NGADVNSSTIVNGSILYTLGDPSTTYTAVQQAVGTQTDIAGGCLLLSIQAGGVAQVVQSG
CCCCCCCCEEECCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHCC
KSGCNYGNVSLSFPVTGSWSVYSRNANVITISLPKSVGAPTVPIDDDIKNVINAGGSLVV
CCCCCCCCEEEEECCCCCEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEE
GLMNGKLMGGYMLPASQPQTVAQFPAATTDTIAASMRAAAASLGIQQNP
EEECCEEECCEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA