Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is 126453814

Identifier: 126453814

GI number: 126453814

Start: 3609075

End: 3609731

Strand: Direct

Name: 126453814

Synonym: BURPS1106A_3693

Alternate gene names: NA

Gene position: 3609075-3609731 (Clockwise)

Preceding gene: 126455225

Following gene: 126453444

Centisome position: 90.49

GC content: 58.9

Gene sequence:

>657_bases
ATGAAACAGTTCAGCCGATTTTCCGCGACTACCGTCGCGATCGTCACCGCCGCGGCGCTTTCAGCCTGCTCGAGCGGCCC
TTCCGACAGCGACGCCAAGGCTGCCATCCAGGCGTCCCTGGGAGGCTGCCAATACCTTTCGATCGACCACTTCGAGAAAG
TCAACGGTACGCCGCAGGGCGATGGTCACTATCTCATAGACGTGAAATACACGGTGTCGATGAAGCCAACGCCCGACATC
AAGGCTTATGCCAGCGAGAAGTACGCAGAGGAGGTCGACAACCTGAAGAAGCAACTCGCACATGCGCATGATGTCGAGAA
CGCCTGGAAAGCTGATCAACAGGCTTGGATGCAGGCGAACCCCGGGCAGGACGCCGCCGCGTATGAAGTCGCCCACCAGG
ACGGCTGGGCCGACTATCAGAAGGTCATGCCGCTCCTTCTCGGGGGCGATCAGCTCGTGAATAACGCACCGCGAGCAGCC
AAAGCGGCAATCGAGCGCGCCATGCGGCAAAGTTGCCCCAACGTCAACTCGTCGCTGCTCGACAACTTCTTCACCGGAAA
CGAGCCGGTTGAGCAGTATGCGGAGGGAATTTCAGAAACTTTCAGCGGCAAAGTCGCCATGACAAAAACGGACAACGGTT
GGCAAGCAGACCGCTGA

Upstream 100 bases:

>100_bases
GCGAGCTTGGGCATCCAACAAAACCCATAAGGACCTGCGTCCTTCCTCTTTCGCTCCCGGCGGCCTTACCTCGGGAGCGA
TCTCTTCCTTACAAGACATC

Downstream 100 bases:

>100_bases
TTCGCGCCCCGTGAAGCCCATCGGGCACCCGCGTCGCCGGAAGATGCCAACATGCTGAGGCGCGCCCTATGGTGCGCCTC
TACCGCGCCGCACTTCTTTT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MKQFSRFSATTVAIVTAAALSACSSGPSDSDAKAAIQASLGGCQYLSIDHFEKVNGTPQGDGHYLIDVKYTVSMKPTPDI
KAYASEKYAEEVDNLKKQLAHAHDVENAWKADQQAWMQANPGQDAAAYEVAHQDGWADYQKVMPLLLGGDQLVNNAPRAA
KAAIERAMRQSCPNVNSSLLDNFFTGNEPVEQYAEGISETFSGKVAMTKTDNGWQADR

Sequences:

>Translated_218_residues
MKQFSRFSATTVAIVTAAALSACSSGPSDSDAKAAIQASLGGCQYLSIDHFEKVNGTPQGDGHYLIDVKYTVSMKPTPDI
KAYASEKYAEEVDNLKKQLAHAHDVENAWKADQQAWMQANPGQDAAAYEVAHQDGWADYQKVMPLLLGGDQLVNNAPRAA
KAAIERAMRQSCPNVNSSLLDNFFTGNEPVEQYAEGISETFSGKVAMTKTDNGWQADR
>Mature_218_residues
MKQFSRFSATTVAIVTAAALSACSSGPSDSDAKAAIQASLGGCQYLSIDHFEKVNGTPQGDGHYLIDVKYTVSMKPTPDI
KAYASEKYAEEVDNLKKQLAHAHDVENAWKADQQAWMQANPGQDAAAYEVAHQDGWADYQKVMPLLLGGDQLVNNAPRAA
KAAIERAMRQSCPNVNSSLLDNFFTGNEPVEQYAEGISETFSGKVAMTKTDNGWQADR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23609; Mature: 23609

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQFSRFSATTVAIVTAAALSACSSGPSDSDAKAAIQASLGGCQYLSIDHFEKVNGTPQG
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEECHHHHHHCCCCCCC
DGHYLIDVKYTVSMKPTPDIKAYASEKYAEEVDNLKKQLAHAHDVENAWKADQQAWMQAN
CCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PGQDAAAYEVAHQDGWADYQKVMPLLLGGDQLVNNAPRAAKAAIERAMRQSCPNVNSSLL
CCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHH
DNFFTGNEPVEQYAEGISETFSGKVAMTKTDNGWQADR
HHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MKQFSRFSATTVAIVTAAALSACSSGPSDSDAKAAIQASLGGCQYLSIDHFEKVNGTPQG
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEECHHHHHHCCCCCCC
DGHYLIDVKYTVSMKPTPDIKAYASEKYAEEVDNLKKQLAHAHDVENAWKADQQAWMQAN
CCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PGQDAAAYEVAHQDGWADYQKVMPLLLGGDQLVNNAPRAAKAAIERAMRQSCPNVNSSLL
CCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHH
DNFFTGNEPVEQYAEGISETFSGKVAMTKTDNGWQADR
HHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA