| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is 126455178
Identifier: 126455178
GI number: 126455178
Start: 1249659
End: 1250597
Strand: Reverse
Name: 126455178
Synonym: BURPS1106A_1275
Alternate gene names: NA
Gene position: 1250597-1249659 (Counterclockwise)
Preceding gene: 126454694
Following gene: 126454366
Centisome position: 31.36
GC content: 65.5
Gene sequence:
>939_bases ATGGGCAAAAAAACGTCCGCGACCTCCTTCTTTCGTGATCCCGCTGGCCTGCACGCCGCCAGCGCCTTTCTGTCCGGCTC GGCGGCGAGCGACACGCTCGCGCCGGCCCGCCCGCCCGCCGCGGACACCACGCGGCACGACGACAACGAACCCGCCTCGC ACCGCTACCGGACGATCTGGCTGTCGGACATCCATCTCGGCACGAGCGGCTGCCAGGCCGGCTACCTGCTCGACTTTCTG AAGCACAACGAATCGGAATACCTGTACCTCGTCGGCGACATCATCGACGGCTGGCAGCTCAGGAAAGGCTGGTACTGGCC GCAGGCGCACAACGACGTGGTGCAGAAGATCCTGCGCAAGGCGAGAAAGGGCACGCAGGTCGTCTACATCCCCGGCAACC ACGACGAAGCCGCGCGCCAGTTCTGCGACCTCGCGTTCGGCGAGATCCACGTGCGCGGCGAGGCGTTCCACACGACGCTC GCGGGCAAACGTTTGTGGATCGTCCACGGCGACCTGTTCGACGGCGTGATCCAGCACGCGAAATGGCTCGCCTATCTCGG CGACACGCTGTACACGCTGATCCTCGTGCTCAACCGCTGGTTCAACCGGATCAGGAGCCGCTTCGGCTTCCAGTACTGGT CGCTGTCGCAATACCTGAAGCACCAGGTGAAGAACGCCGTGAACTTCATTTCGTCGTTCGAAGCAGTGATGACCGACGAA GCGCGCCGCCGCGGCTGCGACGGCGTCGTCTGCGGCCACATCCACAAGGCCGAGATCCGCGACATCGACGGCGTGCTGTA CTGCAACGACGGCGACTGGGTCGAGAGCCTGTCCGCGCTCGTCGAGACGATGGAGGGCGAGCTGAAGGTCGTCTACTGGA CCGTGATGCGCACGCCGCCCGCCGCGCTGCCGCGCAAGACCAAAGCCGCCACCGCCTGA
Upstream 100 bases:
>100_bases CCGCGGCTGATTCCCCGTAATAAGAACGTCTCGTGACTGTCATGGCACAGTCACGCCCGCATGGCGCAATGCCGGTAACG TCAATCGGCGCGAGTCATGC
Downstream 100 bases:
>100_bases TCCGCCAGAGGACTGCCTGCGATGAAAATCATGATCGTCACCGATGCGTGGGAGCCGCAAGTCAACGGCGTCGTGCGCAC GCTCAAGAGCACGGCGCGCG
Product: Ser/Thr protein phosphatase family protein
Products: NA
Alternate protein names: Ser/Thr Protein Phosphatase Family Protein; Calcineurin-Like Phosphoesterase; UDP-2 3-Diacylglucosamine Hydrolase; Metallo-Phosphoesterase; Metallo-Phosphoesterase Protein; Phosphoesterase; Metallophosphoesterase Family Protein; Calcineurin Phosphohydrolase Superfamily Protein; Calcineurin-Like Phosphoesterase Family; Metallo-Dependent Phosphoesterase; Metallophosphoesterase Protein
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MGKKTSATSFFRDPAGLHAASAFLSGSAASDTLAPARPPAADTTRHDDNEPASHRYRTIWLSDIHLGTSGCQAGYLLDFL KHNESEYLYLVGDIIDGWQLRKGWYWPQAHNDVVQKILRKARKGTQVVYIPGNHDEAARQFCDLAFGEIHVRGEAFHTTL AGKRLWIVHGDLFDGVIQHAKWLAYLGDTLYTLILVLNRWFNRIRSRFGFQYWSLSQYLKHQVKNAVNFISSFEAVMTDE ARRRGCDGVVCGHIHKAEIRDIDGVLYCNDGDWVESLSALVETMEGELKVVYWTVMRTPPAALPRKTKAATA
Sequences:
>Translated_312_residues MGKKTSATSFFRDPAGLHAASAFLSGSAASDTLAPARPPAADTTRHDDNEPASHRYRTIWLSDIHLGTSGCQAGYLLDFL KHNESEYLYLVGDIIDGWQLRKGWYWPQAHNDVVQKILRKARKGTQVVYIPGNHDEAARQFCDLAFGEIHVRGEAFHTTL AGKRLWIVHGDLFDGVIQHAKWLAYLGDTLYTLILVLNRWFNRIRSRFGFQYWSLSQYLKHQVKNAVNFISSFEAVMTDE ARRRGCDGVVCGHIHKAEIRDIDGVLYCNDGDWVESLSALVETMEGELKVVYWTVMRTPPAALPRKTKAATA >Mature_311_residues GKKTSATSFFRDPAGLHAASAFLSGSAASDTLAPARPPAADTTRHDDNEPASHRYRTIWLSDIHLGTSGCQAGYLLDFLK HNESEYLYLVGDIIDGWQLRKGWYWPQAHNDVVQKILRKARKGTQVVYIPGNHDEAARQFCDLAFGEIHVRGEAFHTTLA GKRLWIVHGDLFDGVIQHAKWLAYLGDTLYTLILVLNRWFNRIRSRFGFQYWSLSQYLKHQVKNAVNFISSFEAVMTDEA RRRGCDGVVCGHIHKAEIRDIDGVLYCNDGDWVESLSALVETMEGELKVVYWTVMRTPPAALPRKTKAATA
Specific function: Unknown
COG id: COG2908
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35195; Mature: 35064
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKKTSATSFFRDPAGLHAASAFLSGSAASDTLAPARPPAADTTRHDDNEPASHRYRTIW CCCCCCCHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE LSDIHLGTSGCQAGYLLDFLKHNESEYLYLVGDIIDGWQLRKGWYWPQAHNDVVQKILRK EEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCCCCCCHHHHHHHHHHH ARKGTQVVYIPGNHDEAARQFCDLAFGEIHVRGEAFHTTLAGKRLWIVHGDLFDGVIQHA HHCCCEEEEEECCCCHHHHHHHHHHHCEEEECCHHHHHHHCCCEEEEEECHHHHHHHHHH KWLAYLGDTLYTLILVLNRWFNRIRSRFGFQYWSLSQYLKHQVKNAVNFISSFEAVMTDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARRRGCDGVVCGHIHKAEIRDIDGVLYCNDGDWVESLSALVETMEGELKVVYWTVMRTPP HHHCCCCCEEECCCCHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCEEEEEEEEECCCC AALPRKTKAATA CCCCCCCCCCCC >Mature Secondary Structure GKKTSATSFFRDPAGLHAASAFLSGSAASDTLAPARPPAADTTRHDDNEPASHRYRTIW CCCCCCHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE LSDIHLGTSGCQAGYLLDFLKHNESEYLYLVGDIIDGWQLRKGWYWPQAHNDVVQKILRK EEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCCCCCCHHHHHHHHHHH ARKGTQVVYIPGNHDEAARQFCDLAFGEIHVRGEAFHTTLAGKRLWIVHGDLFDGVIQHA HHCCCEEEEEECCCCHHHHHHHHHHHCEEEECCHHHHHHHCCCEEEEEECHHHHHHHHHH KWLAYLGDTLYTLILVLNRWFNRIRSRFGFQYWSLSQYLKHQVKNAVNFISSFEAVMTDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARRRGCDGVVCGHIHKAEIRDIDGVLYCNDGDWVESLSALVETMEGELKVVYWTVMRTPP HHHCCCCCEEECCCCHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCEEEEEEEEECCCC AALPRKTKAATA CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA